XLOC_030838 (adamts12)


Basic Information

Item Value
gene id XLOC_030838
gene name adamts12
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 8832299 ~ 8910703 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059984
TTTCTCCGTTTCTCTGACCCCAGATGTCTCCAGCTTTCACCAGAAACTCCCCTCAGGACTGACTTTAACCAGTTCTCCGGCGTCGGAGCGTTACTTGCTCTTCTCATTTCGCGTTGTAGAAACATGCCAAGTCGGGTCAGCGTTGCGATTTTGCGGTTcaattgtgttttgtttctggCTGCGAGCCACGTCAAGAGCTCTGAACCGGACTACCTCTTTCCAGACACAGAGCAAGAGCACTTCGTCAAGCAGCACTCTGAGTTTTATGTGGATCATCCTGAAAAAGTAAATGGAGAAGGGAAGTTCATCTCTTATGCTTTATCACATCACTTCACCAGGCGGCGTCAGAAGAGAGACCTGAATTCAGCAGAGAGGCGAGTGTATTACAAACTCAACTACAGAGGTCGAGAGCTGACTCTTAATCTGACCACCAATGACAATCTGCTGTCCAACGAATTTATTGTGGAGAAACGCAACGGGAGTTTAGCAGAGAAGTGGCCACAATCATCTGATAGCGGTTCCTGCCATCTTATTGGCACAGTGACGGATGACAACGTACAAGCGACCGCCGCCATCAGCACCTGTGAGGGACTGAGAGGGCTGTTAAATTTACCAGAGGGGCCATTATTGATCGAGCCGGTCCGTGGACGCAGCCCAAACCTCACTCATCCACAACACCCGCATGTTCTCTACCAGAGCTCAACCTGGAGCAGATTCAGACAGAGACGCAGCATAGACGCACACCAACAGAGTCCCTGTGGGGTCAAAGataGTTCCGGATATTTCCAACAGGTGGAGCAGGATCGGGAGCTCTGGGAGCGAGAGAGTGTGGACCGGAATCACCGTCCAGATCCGGAGCGGCCCCGGAGGATCTCCCCCCGCTCCATCAGCAGAGAGCGCTGGGTGGAGACCATGGTGGTGGGCGACTCCAAACTCGTGGACTACCATGGAAGTGGGAGCGTTGAGTCCTACATCTTTACCATCATGAACATGGTGGCTGGAATTTTTCATGACGCCAGCATCGGTAATGCTATTCATATAGTACTGGTGCGACTCATTCTGCTTCATGGAGAGGAGAAAGGGCTGAAGATTATTCACCATGCTGATACCACTCTCACCAGCTTCTGTACTTGGCAAAAAAACCTCAATCCTCAGAGTGACACTCATCCGGCACACCATGACGTTGCTATTCTCATCACACGGAAGGATGTCTGCGCTGGCATGAATCAGCCGTGCGAGACTCTGGGTTTATCTCACCTGTCAGGCATGTGTCAGCCGCATCGATCCTGCAATATCAATGAGGACTCGGGGCTTCCTGTGGCGTTTACCATCGCTCATGAGCTCGGACACAGTTTTGGCATCCAGCATGACGGTCAGGGCAACGACTGTGAGTTTGTGGGCAAACAGCCCTTCATCATGTCCCGGCAGCTCCAATATGACTCCTCTCCTCTCACCTGGTCATCCTGCAGTAAAGAGTACATCACACGCTTTCTGGATCGTGGCTGGGGTTTCTGTCTGGATGACCGTCCTTCTAAGAGAGACCTGAGCACCCCGGGAGCAGCTCCAGGAGTGAGATACACACCGCAGCACCAGTGCCAACTGCAGTACGGCCCTAACGCCACCTTCTGCTCAGAAGTTGAGAATGTGTGTCAGATTCTGTGGTGCTCAGTAAATGGATCGTGCCGCTCTAAACTAGACTCACCGATCGACGGAACCAGGTGTGGACCTGAAAAGTGGTGTATCTCTGGTGAGTGTGTGATCGTGGGGAAGTTACCGGAAACCGTGCATGGAGGCTGGGGTCCCTGGAGCTCCTGGTCTCACTGTTCTCGCACCTGTGGAGCCGGAGTTCAGACGGCAGACAGGGAATGCAACCAGCCTAAGCCTGAGTTTGGTGGGAAGTATTGCACAGGAGAGCGGAAGCGCTACCGTGTTTGCAACACAAAGCTGTGTGTCAGAAAACATCCCAGCTTTAGAGAGATGCAGTGCAGTGAATTCAACACCGTGCCGTATCACAATGAACTCTACCAGTGGATTCCTGTTTCAAGCCCTTcgcGTCCTTGCGAGCTTCACTGCAAACCTGTGGATGAAAACTTTTCTGAGAAGATGTTGGATGCGGTTACAGATGGAACGCCCTGCTTTATGAACAACAACAGCAGGAACATCTGTGTCAATGGTGTGTGCAAGGAGGTGGGATGTGATTTTGGCATTAATTCTAACGCTAAAGAGGACAGCTGTGGTGTTTGTCTTGGTGATGGATCCACTTGTGAGACGGTGAAGGAAAACTTTGTGGAGCAAGATGGATTTGGGTACATGGACCTGGTTTTGATCCCGGCGGGAGCTCGGGATATCTACATTCAGGAAGTGGAAGAAGCTGGGAATTTCCTTGCGATGCGAGCGTCTGATTCAGATGAATATTACCTCAATGGGAATTACATCATTCAGTGGAATGGAGAGTACGAGGCTGGTGGCACAAAGTTTAACTACGAGCGCAGCGGAAATATAGAGAATCTCACCTCAGCGGGACCAACAACTGAACCTGTCATGATCCAGTTGTTGTTCCAAGAGCTGAATCCCGGTGTCAAGTACGAGTACACCATTAAGAGGCGTCGCCCGCTGGGAAACGAAATCCTGGAACCAGAGTATATCTGGAAACATGGAGCCTGGACTGACTGCAGCACAACTTGTGGCCTTGGTGAGCAGCATCAGCCTGTGCGCTGTTTTGAGCCAGAGGTTGGTGTGGTCGAGGAAAACCTGTGTGATCCGAGTACACGTCCTGATGATAAACATCGCAAGTGCAAAAGCAGGGACTGCCCTGCAAGGTGGTGGGTTGGAGGATGGCAGACGTGCTCGTCCACATGCGGTTCAACCGGAGTGAAAAAGCGCACCATTCTGTGTGTCCGTACGGTGGCTGGAGAAGAGCGAGTTCTGCACCCTGGTGACTGTAAGCAGCTGCTCAAACCCAAACCTGCAGTTCCTTGTAACCGAGACGTACCGTGTGGCTCAGAATGGACTGTGGGGAACTGGAGTGAGTGCTCCCAGTCTTGTGATGGAGGAATAAAGTCGCGAATGGTCAAGTGTGTGGCAAAACAACCCAGCCGGTGCAACCCTGCCACTCGACCCCGCTCCACAATCCTCTGTAACCTCCAGAGCTGCTCATCCACTAACCGATGGACAGGACCACGATTCAGACCACGCAAAATCCCAACCCAGCCCCCCGGGACCCAAACAACACAATACAGCCCTACTATCACACCTCCAAACACCTCTACACCCATTACCACACAATCCAACACTTCCCCAACATCGGATATCATCCACGAAGACGACAAAGACTTTatactagtaaaaaaaaacaatgtagcaGTTCCCACAATTACTGAAGACGAGGAGGGAAGCACAGACCTGCAGCCTCCTGATAAAAGCTATACACCAGGTTATGATTACATAGAAGATCCAGAACGGATACGTGAGGATGATTTGTTCACCAGCAAACCTGAAGAAGTGCTCATATCCAGTGTGCAACCAATAACAATGAGTGCACCAGTTAGCACAACAAAACCAGCCATTACTACTACCATTCGGACGCAATATGATGGTCATCTGGCGACGCATGCATGTGCCAAAACTAGCTTATATGAATTTAATTCTACCCCAAAACCAACGCTGTCACATTTAAACACTCTAAGTTCACAGGTAACTGTTCCTACAGTGAAGATACTGAGAAAGGCCTTGCAAACGCTGAAAGTTCCCAATAAAAGCAATGTGCTTAAAGCAGCCCGACTGAAACTGCAGATGACGACCATTACAGATGATGACGATGGGAATCTGAACGCTCAGATTGTCAGCAAGAATGCCTTTTGGAAAGTGGGGAACTGGAGTGATTGCTCTACTTCGTGTGGTCTTGGTGCAGTGTGGCGGTCCGTCTCCTGCAGCTCAAAGCAAGAGGAAGACTGTGCCAGTGTGAAGAAGCCAGAACCGGCCAGACGATGCAACCTGCGACCCTGTGCCGTCTGGAAGACTGGAAACTGGTCCAAGTGTCCTGAAGGCTGTGTGACCGATATGAAGTATCGAGAAGTGCAGTGCATTGATACTCAGAACAGGCGTCCACTGAGGCCTTTTCACTGTCAGGCTCTTTCGCACAAACCACCCAGTAGTCTGCCCTGCAACACTCTGCCCTGCCTGCAGTGGATGCATTCGCCCTGGGGAGAGTGCTCAAAAAGCTGTGGACATGGAGTGAAGGAAAGGCTTGTGTACTGTCCCGAGAACCAGCACTGCAATGTCACACTCAAACCCAACAGCACTGAGTCCTGCCATCTGCAGCCGTGCGCCGGCTGGGCAACTGAAGCCTGGAGTCAGTGCTCCAGAAGTTGTGGTGGAGGGGTTCAGAAGCGAGCGGTGAGGTGCATAAATGAGGAATCCGGCGAAGAAGAAAAGGCGTCAATGTGTGCAATAATCAATAAACCCGACAGTGTACAGAACTGCAGCACAGAAGACTGCAAAACTGATTTAGGTCTGCTTTgtaagaaaaacagcatgtcgtCACTGTTTTGTGAGAAACTCAAGCTGCTGGGCCGTTGCTCTCTTCGGTCCATCCGCAAGCAGTGTTGTGTGACGTGTATGGTGTAACTCCTGCAGAGGTCAGGTTTGGGTCATCGAGCAAAAGCACAAACTACTGGACAAACTGCAGACAAGGTTGATGAGGCCCTCAAAACAGAGATGTCCCTCACacatccagttgaagtcagaattattagccttcctttatatttttccccaatttctctttaatggaaagatttattcaacacattttaaacataatagttttaataactcatttctaatgactgatttattttatctttgccatgatgacagtaaataatatttggctagatattttaggatcctagtattcagcttaaagtgacatttaaaggcttaattagggtaattaggcaagtaataaAGGTAAATCCTTGCATAACAGTTGTTTGTACTGTATataatcgaaaacaaatattgtttaagggggctaataattttgaccttaaaatggtaaaaaaaataaaactgcttttattctagccgaaataaaacaaataaggctttctccagaagaaaatatattgtaggaaatactgtgaaaaattccttgctctgttaaacatcattagggaaatatttgaaaaaggaaaaaaattcacaggagcgcgaataattttggcttcaactgtatatcatacaAATGCGTGTTTTACTTGAAACAACAATCCTAAAAATGTCTCCATAtttcttaaagtgatagttcactcaaaaatgaaaaaataatgttaaattgcTTTCCCTCATGACATTAAGGTGATGTTTTTTCTTCTACAACGTTActgaagatttttagctgaatcttACAGTTAACCTATATACAGTTAACCTatatcaggcatgtccaaactcagttctggagggccagtgtcctgctgactttagctccaacttgcctcaacacaccagccaggaagtttctagtttaCCTACTAGGAGCTTgataagctggttcaggtgtgtttgattagagttggaactaaactctccaggacaccggccctcctggaccaagtttggacaaccCTGTATAACAGTATATAACATTGTTATGCACTCATTTAGGACTTCTTTGTGCTCTAGAACCCAAATAGATGTTTTTCACAGGTTTACCAGTAAAGAACCGGTCGAACACAGCATTTCTTTTCTCAAGGCTGAAAAGATTAAGCACATACAAGCTGATATTCAGGTTATTTCTTAATAATTGTAGTTTCTTATTATTTGAAATGTCATGCAACCCCCGTCTGATCAACATTTAAGGAACACCTTTAAAGTCAAAATGTGCCGTTTTTAAAAgagttattaaagttattttgCACAGATAAAGTTAACGCAATACTATGTGAATCCAattgtttatactgtaaaaaatgatatgatcaattagtcctggcagcgtatgtttttagttcattagaacttattaaactaagctaATAATGTTCTAACTTGATTTTATAAGTTACCTAAGctgttaagtcagtttaacatactataagttcaatggacttaaTTTGATCCAGCTTAAAAGTTTAAGGCAaacaggattttttacagtgtagaattaCTAACACATTAATCAGAAAATATGGATGCAATATTAAAAGCATGAACATTTAAGGACTGATTTCAAACATTACGGTCTCaggtagttttattttttaccttattttatttGTGATAGAAGGTGCTTTGAAAGTTTGCATGGGGAAAACAAGTAACATCACTAACATCTGAATATAACTTGAGAATTTAAgactttgtttttattcattccattgtggcgacctctgataaatcagagactaagctgaaggaaaaccaTGTCCACATTTTTTCACCAAGCAGTCACAGTTATCATATAATACCTTTATTGCTGTTTTGTCATTGTTTCACTTTAATGATAGCAAAAACACTCTCAGGACTGATTATTTCACTTTATAAGACCTCAGTGTATCCCTAGGAGTCACAGACATTCATATTTGAAGCACTTTAactttagttaatatatttactaacatgaataaacaatgataaatacatttattatggcatttattcatcttcgttaacattagttaatgaaaatacagttgtttattgttagttcatgttaactaatgttaacaagctttTGGACTTTAATAATGCaacagtaaatgttgaactaagaTTTATAAATGCTGTACGAGATTGTTCCTTCttagttcatgctagtaaatacattaaaggggacctattatgaaaaaatcccttttataaggggtttaaacagttgtgtggcaatagtgtgtaaatataaccagcttctattAGAAAAAGgaatttgttctgtttttataatcacacttgataaagacagtctgcagaaacactttatttaacattctccctttgtacgtgtcaagAGAAGGgtaaagccccgcccattagtgacgacctctccctcattagcataaacagccctgggtGAGCAGCAGCCATCTACCATTAGATTTTACACGAGTATGTCAGACTATTTGGATAAAAGTCTAACAggggcagttttaaagagttataaatcatttttgtgtggtattttgagctgaaacttcacatacaggACATAAGAGACTTATTTTACGTCTTGTAAAAATGGGGATAATACGTCccctttaaataacattaactaatggaaactTATTGAAAAGTGTGATCACAATTTCAGCTAATATTCTTTCAGTATTGTAGCACATAACAAAAATCAATATAGTGTATGGCCTGAGAGTGCATAAATTAATAGCAAATTTGAATTTTTGTTTCAGCTATCACTTTAAAACAAaacttcaacccaggctcattctgaaaatgtacccctatatacatttttggagagcaccaaatacatccctgTAGCtagtttttttgccatttttgttttcacgaatccaccagaggtcaccgtgtacactttttcagatttttctgactttgtcaaatttctctcgcaagtgtcATTCCTGCCTGTTGTTCTCCCGTAAACCCACCAGATGCCGCagtccactgactgactgactaattgattgacccaccctcctccttccctaaacccagtcaatagtttttttaaaagcaccgattgaccagtgcCCATCTACTTTTcataaacccaaccgtcagtgtttttaaaagcaatccaaaaaatgaaaaaccttcatctgattttaccacattttcagattttaccacattttcaccgttatttacaagtttatttttattttggcttttgttttacctgctttctacaACTGTTCTTCACCGGATTCGAACCccatcattgtggtcaactcctctctgcgtgtGAAGTCATACTTCAACTGGTAAaagtggaaaagccatccatacagtaAGTAGTCAGCTTgttagcgtgaaaaggaacggcgtcacaccgcctgtagcgtttcttttaaaaatgaaatgcagccacgggtacttctagctacataattcgcattctccagaaatatatatagggctacgttttcagaatgagaccatgttgttgttgttttttaaataagcagCCTTTTTTGTGTTAGTTATTATAGtggtattttaattttaaaatggaataaatataattatttcagGTTTAAAAGAGATCCAAGGCACATTACATTTCATAAAAATTTCAATGTATTCACAGAATATGTGGTCTAATGTAGTTTCAACTATCAATATAattcgatttttttatttactactaAACAAATCAAAAGTATAAATAGACTGTTTTCTGAATCGCTACATGGGACGTACGATTGAGTTTTGGTAATCTGCACTGTTTGTCATAGGTTTTTCTAGTTAGTGTATTTCAGTCACAGTTATTTGAGAATATGGATCAGAcggagtgaatagtgtattgcaGAGGCTCACGGGAGCTTTGTGGTGCTGTAGACTGACGGTGCTCTGTGCTCATGAAGCATTATAGAGGTGCTCAAGACTTTGTACATTGTGAGGTATTGCAGGTCAATCCTCTCTGCCCTTTAAAACAGGCCTGAAAGTTTTATACTGCTCATCTGTACTGCTGGAATgattataaataaatgcagtcatgATGTGTGCA
>TCONS_00059985
TGGATTTAAGTGAAAATATCTAATAGAAATCTAATAAAGAACTGTCTCGTTTTCATTTCTAGAGCACTTCGTCAAGCAGCACTCTGAGTTTTATGTGGATCATCCTGAAAAAGTAAATGGAGAAGGGAAGTTCATCTCTTATGCTTTATCACATCACTTCACCAGGCGGCGTCAGAAGAGAGACCTGAATTCAGCAGAGAGGCGAGTGTATTACAAACTCAACTACAGAGGTCGAGAGCTGACTCTTAATCTGACCACCAATGACAATCTGCTGTCCAACGAATTTATTGTGGAGAAACGCAACGGGAGTTTAGCAGAGAAGTGGCCACAATCATCTGATAGCGGTTCCTGCCATCTTATTGGCACAGTGACGGATGACAACGTACAAGCGACCGCCGCCATCAGCACCTGTGAGGGACTGAGAGGGCTGTTAAATTTACCAGAGGGGCCATTATTGATCGAGCCGGTCCGTGGACGCAGCCCAAACCTCACTCATCCACAACACCCGCATGTTCTCTACCAGAGCTCAACCTGGAGCAGATTCAGACAGAGACGCAGCATAGACGCACACCAACAGAGTCCCTGTGGGGTCAAAGGTCAGACCAACAGCAAATATATTTATGATAATGGCTGTGTGtaggcgtaggtttcctcca

Function

symbol description
adamts12 Predicted to enable metal ion binding activity and metalloendopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in extracellular region. Is expressed in several structures, including digestive system; eye; heart; pleuroperitoneal region; and thymus. Orthologous to human ADAMTS12 (ADAM metallopeptidase with thrombospondin type 1 motif 12).

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008237 metallopeptidase activity molecular_function

KEGG:

id description
ko01002 Peptidases and inhibitors

ZFIN:

id description
ZDB-GENE-070705-471 Predicted to enable metal ion binding activity and metalloendopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in extracellular region. Is expressed in several structures, including digestive system; eye; heart; pleuroperitoneal region; and thymus. Orthologous to human ADAMTS12 (ADAM metallopeptidase with thrombospondin type 1 motif 12).

Ensembl:

ensembl_id ENSDARG00000067549

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059984 False 8713 mRNA 0.43 24 8832299 8910703
TCONS_00059985 True 656 mRNA 0.47 2 8891244 8907819

Neighbor

gene id symbol gene type direction distance location
XLOC_030837 fgf10b coding downstream 14458 8769069 ~ 8817841 (-)
XLOC_030835 mybbp1a coding downstream 66871 8712798 ~ 8765428 (-)
XLOC_030836 BX897662.2 coding downstream 109256 8722928 ~ 8723043 (-)
XLOC_030834 paip1 coding downstream 121142 8684652 ~ 8711157 (-)
XLOC_030833 zgc:153352 coding downstream 149709 8661414 ~ 8682590 (-)
XLOC_030839 AL928901.1 coding upstream 49025 8959728 ~ 8963775 (-)
XLOC_030840 NA coding upstream 119537 9030240 ~ 9031751 (-)
XLOC_030841 atp5meb coding upstream 159679 9070382 ~ 9073433 (-)
XLOC_030842 kcnv2b coding upstream 167495 9078198 ~ 9090178 (-)
XLOC_030843 NA coding upstream 196382 9107085 ~ 9127559 (-)
XLOC_030832 NA non-coding downstream 188116 8640678 ~ 8644183 (-)
XLOC_030831 BX897662.3 non-coding downstream 192299 8637804 ~ 8640000 (-)
XLOC_030830 BX897662.1 non-coding downstream 196907 8635268 ~ 8635392 (-)
XLOC_030826 NA non-coding downstream 415466 8409461 ~ 8416833 (-)
XLOC_030844 NA non-coding upstream 233664 9144367 ~ 9146777 (-)
XLOC_030845 AL845369.1 non-coding upstream 255692 9166395 ~ 9170534 (-)

Expression


Co-expression Network