XLOC_030914 (gnb1l)


Basic Information

Item Value
gene id XLOC_030914
gene name gnb1l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 15222011 ~ 15283509 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060101
CATCTGTTTCATGCTGCACGCGGGATTCCGCCGATCATTCAAGtttctgtAGGATACATATCAGGGATGTTGCATTTGCTGTGGTGATGGCCCGTCCTCCTCCTGACCCGTTGTACATCCTGAGGGGTTCGGGTGCCTCAGTGAATGCGCTTCACTTCTGCTGTGATGGAGATGGACCACCACTTCTCTACTCTGGGTCAGGTAAAGGTGCAGTCCATGTGTGGAACCTGAGCACCAGGAGAGCAGAACGTGTTTTAGAGAGCCATGCTGGGAACTCTGTAATCTGGCTTAACACCTTCAACAACAGCAGAAGCTGCCTCATCAGTCAGGGTCGGGACATGCGGGTGTGCGTGTGGGATCTGTCTGAAGGCCGCAGTGCAGTGACAGACTCTCTCCACACAGGCAGCGTGGGCTTCTGTCAGTGCTCTCTGCTGGAGTCCCGGCTCGGATCCACTCTCCTGGCCCACCCTACACAACACATGGAGGAGgTGAGTGTAGTGGAGATGAGCAGCTGGACTCAAGTGTGTTCTCTGAAACCAGATTCAAACCTGGGGATGCTCATGAGCATGAAGATGTGGCAGGCTGATTCTGGTCCAGTTCTATGTGCCGGTTATGAGGATGGCTCGGTGGTATTATGGGATGTTTCTCATCGCCGTCCATTCAGCCTTCTGAAGGTTCATCCGGAGCCAGTCATGAGTCTAGATGTTGACGTATGCAGACAGAAAGGCATTTCAGGGTCTTCAGAAAATATCCTTCAATCCTGGCGGCTTGACAATCAGCAGAGCCTTCAGATGCACGACTCTATTCAGATGACCAATCCTGGGGTCTCCCAGCTGCGGATCCGTGCCGACGGCAAGATCCTAGCTTCGGCAGGCTGGGACAACAACATTAGAGTATTTGGCTGGAAGAAACTAAAGCCACTGGCTGTTCTGCAACATCATACTGACATGGTGAATAGTGTTGCCTTCTCAGACCATCAGGACCCCACACAGAGACTTTTGGCCGCGGGGTCCAAGGACCAGCGGATAAGTGTGTGGTCTATATATAGTGAAAGTTGAGTTTGGAAGACAGAGGCCTGCTTTGCCATTTCCTTCAAACTGATTGTCGCAAATTACTCTGACAATATTTACATACTTGAACGTGGCGCTAACATCTTTTTCTTTAAATGAATGTGCCTAAATTAGTGGCTGGCTGCCATTAGGAGGCGGGGCTACAATAATCACATTCGGGATATCTGATTGACGAATTTTTTTGGGTGCAATTCTCCAAAATCAAACATAA
>TCONS_00060102
CTGATTTTCCAGGCAGAAACAGGAGCACGCCGACAAATTCTTCACTGTCTTCTCCCGCATGAGAGCCATTAGTCTCTCTGGACACCGCTTATGAAGTCAATTTTACGCTGTCCAGTTTGATTCCAGCTTCGGGACCAGATGCCTCCCATAGGGAGACATGCACGACTCTATTCAGATGACCAATCCTGGGGTCTCCCAGCTGCGGATCCGTGCCGACGGCAAGATCCTAGCTTCGGCAGGCTGGGACAACAACATTAGAGTATTTGGCTGGAAGAAACTAAAGCCACTGGCTGTTCTGCAACATCATACTGACATGGTGAATAGTGTTGCCTTCTCAGACCATCAGGACCCCACACAGAGACTTTTGGCCGCGGGGTCCAAGGACCAGCGGATAAGTGTGTGGTCTATATATAGTGAAAGTTGAGTTTGGAAGACAGAGGCCTGCTTTGCCATTTCCTTCAAACTGATTGTCGCAAATTACTCTGACAATATTTACATACTTGAACGTGGCGCTAACATCTTTTTCTTTAAATGAATGTGCCTAAATTAGTGGCTGGCTGCCATTAGGAGGCGGGGCTACAATAATCACATTCGGGATATCTGATTGACGAATTTTTTTGGGTGCAATTCTCCAAAATCAAAC
>TCONS_00060103
ACATATCAGGGATGTTGCATTTGCTGTGGTGATGGCCCGTCCTCCTCCTGACCCGTTGTACATCCTGAGGGGTTCGGGTGCCTCAGTGAATGCGCTTCACTTCTGCTGTGATGGAGATGGACCACCACTTCTCTACTCTGGGTCAGGTAAAGGTGCAGTCCATGTGTGGAACCTGAGCACCAGGAGAGCAGAACGTGTTTTAGAGAGCCATGCTGGGAACTCTGTAATCTGGCTTAACACCTTCAACAACAGCAGAAGCTGCCTCATCAGTCAGGGTCGGGACATGCGGGTGTGCGTGTGGGATCTGTCTGAAGGCCGCAGTGCAGTGACAGACTCTCTCCACACAGGCAGCGTGGGCTTCTGTCAGTGCTCTCTGCTGGAGTCCCGGCTCGGATCCACTCTCCTGGCCCACCCTACACAACACATGGAGGAGgTGAGTGTAGTGGAGATGAGCAGCTGGACTCAAGTGTGTTCTCTGAAACCAGATTCAAACCTGGGGATGCTCATGAGCATGAAGATGTGGCAGGCTGATTCTGGTCCAGTTCTATGTGCCGGTTATGAGGATGGCTCGGTGGTATTATGGGATGTTTCTCATCGCCGTCCATTCAGCCTTCTGAAGGTTCATCCGGAGCCAGTCATGAGTCTAGATGTTGACGTATGCAGACAGAAAGGCATTTCAGGGTCTTCAGAAAATATCCTTCAATCCTGGCGGCTTGACAATCAGCAGAGCCTTCAGATGCACGACTCTATTCAGATGACCAATCCTGGGGTCTCCCAGCTGCGGATCCGTGCCGACGGCAAGATCCTAGCTTCGGCAGGCTGGGACAACAACATTAGAGTATTTGGCTGGAAGAAACTAAAGCCACTGGCTGTTCTGCAACATCATACTGACATGGTGAATAGTGTTGCCTTCTCAGACCATCAGGACCCCACACAGAGACTTTTGGCCGCGGGGTCCAAGGACCAGCGGATAAGTGTGTGGTCTATATATAGTGAAAGTTGAGT

Function

symbol description
gnb1l Orthologous to human GNB1L (G protein subunit beta 1 like).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component

KEGG:

id description
ko04990 Domain-containing proteins not elsewhere classified

ZFIN:

id description
ZDB-GENE-050320-77 Orthologous to human GNB1L (G protein subunit beta 1 like).

Ensembl:

ensembl_id ENSDARG00000036293

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060101 False 1281 mRNA 0.50 7 15222011 15283509
TCONS_00060102 False 643 processed_transcript 0.47 2 15222015 15223457
TCONS_00060103 True 1005 mRNA 0.53 6 15222232 15264007

Neighbor

gene id symbol gene type direction distance location
XLOC_030913 CR936518.1 coding downstream 6227 15186823 ~ 15215784 (-)
XLOC_030911 NA coding downstream 45913 14780842 ~ 15176098 (-)
XLOC_030912 NA coding downstream 222015 14999622 ~ 14999996 (-)
XLOC_030910 sema4c coding downstream 573578 14529101 ~ 14648433 (-)
XLOC_030909 si:ch211-244o22.2 coding downstream 699299 14477282 ~ 14522712 (-)
XLOC_030915 NA coding upstream 24030 15307539 ~ 15310108 (-)
XLOC_030916 txnrd2.1 coding upstream 28082 15311591 ~ 15350252 (-)
XLOC_030917 taok3a coding upstream 76486 15359995 ~ 15494297 (-)
XLOC_030918 CU694999.1 coding upstream 239499 15523008 ~ 15524782 (-)
XLOC_030919 CR384085.1 coding upstream 407130 15690639 ~ 15692030 (-)
XLOC_030905 CR388049.1 non-coding downstream 976731 14245149 ~ 14245280 (-)
XLOC_030896 AL954191.1 non-coding downstream 1689023 13532874 ~ 13532988 (-)
XLOC_030920 BX649391.1 non-coding upstream 451016 15734525 ~ 15734580 (-)
XLOC_030921 NA non-coding upstream 530266 15813775 ~ 15817557 (-)
XLOC_030926 NA non-coding upstream 995731 16279240 ~ 16351306 (-)
XLOC_030927 NA non-coding upstream 1069488 16352997 ~ 16356940 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000071_03414821_03439810 GNB1L coding CI01000071 null 3414821 ~ 3439810 (+)