XLOC_030922 (si:dkey-1k23.3)


Basic Information

Item Value
gene id XLOC_030922
gene name si:dkey-1k23.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 15841523 ~ 15851953 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060113
GTTTGGTAAGTGTTAAAAACTCGAGGCCTCTATATAAGCAGACTCCTCAATGTCCACCAGCCACATTCGACTTCGCTTTTATCTCTACAGCATCTCTTTTTGTACACtatttctctatctctctctcttaatctttcaaaagcaaaaaaataaataaatcgcccTCACTATGGCGGATGCTAAATCACCTCAATATTGTCAAGATGTTTCCTGGATCCCCCTGAGCTGCCGGTGGCCCAGTGTAATCTTTAACCAACATTTCGGCATGCCTCCGTTATTGGAGCCCCGAGACCTCAGCTGGATGGAGGACATCTTTAGGAGGCTGGGAACGTCGTCCTGGCCCGGGTATGTGCGCTCTGGTTTTCTCGCCCCGCTCCTCCAGGCCTCTGGACCGGCCGTCTTCTCGAAGCCGCACCGGGAGTTGAGTGGAGGAGTGTCGGAAGTGGCCGCTGAGACGTGCAGGTGGAAAATTAGTTTGGATGTCAATCACTTCGCTCCCGCGGAGATCAGCGTCAAAATACAACATGGCTTTTTGGAAATTGCAGGAAAGCATGAGGAAAGACAAGACGGGCATGGCTTCATTGCTAGAAGTTTCACAAGAAAATACAATCTTCCAGGTGGCATTGAAGTTGAAAACCTCCAGACAAGTCTGTCCGCTGATGGGATTCTTACAGTGGAAGCACCCTTTCCCAGCATCCCCCTTCCTGCTGATGTCATCAtccctatccagGTGGAGTCAGGAGCGCAAACCATTGCAGGAAAGCAACAAGACGGTGACAAGCCTCAAGACGACATTAAACCGGAATCATTTGATGGAAAAACACCTGAATCCTCAGTCTCGGCTGGGCATCCAGATGCTGGAAAGGTCACCGAAAGAGACCAGCAGACTGTATCTGATGTAGATCCTTCCAGAGAAGCACAACCCCAGTCCATTGCAGAAGCTGCATCTGGTTTCTCTGTGTCTGGCAGAGAGCAGGTCGGCGAACCCCTGGCTGGCAGAGAGAAGGATAAAGAAGGCAGATTTCAAGAGACGGTCGAGGGCATCCAGCGAGACGGAGAGTCTGCAGACAAGCCTCTGGCTCCAGAGACTCCAGACACCATCACCTCCGAGCAAGCAGAGGTCATCCAGCTTGGGGATCTGGAGGGGGAAGAAGGATGTACAGGCCCTGCTGTGATGAGAGAGGAGCAATCAACCTTCGGGCAAAGCCAGGAGCTAATCAACCCTCAACTGGTGCTCCAAAAGAAAATTGATGCAGGAAAAATGTAggttcccagaaaaaaaaaaaagctacatcCCAAGCTTTATCCTTAGGGTATGTCATTAATCTGGATACATGTGAAAATGGCATTTCACCGTTTGTGCACGCTGGCATTTTCAAACTTTACCCAAAAGTTTCTCATCCACGTagaaatgcattgtttttttatgcaaCATAAGATGGATGTGTTTGACCAACAGAATCtcataactattttatgttttgatgACAGAAATTGATTTAAACAATCTAATTTGCGCACTTCTATAAGACCTGCACACACTAAAGTGAGCAGTTGTGTTCTTTGGCATGGATGAAGCAGGCATTCgtgcttgtttttttataaaaattcatAGTTAGTAGCATTTTTTTCTAGAAGATCCAGCTCTTTTGATCATGCTCTTGCATCTTTTGCTGTCTTTCATGCAAGGCATGTTCTGAAAACGTGCAGCTCAATTTAAAAGTCCCACTTCTAAATTGATACATctcatgaattattattattattattcattatttgacttattttaacTCATCTTTGCAGGAATGTTGTATAAAGAATGTATATAAAGTATCTTCTTTATCAACACTGTGAAAGAGACAGTCAAGCATGCAATATGcatcatattgaccttattcttcaatgtggaagtgcgttcgtttttgtgattgtttcaAAACTTCCGCTTTAGTCGCCTATGgaaaaaatgactaggaataataaacagcagaaaatggtcaaactacttgctctacaaacaagtgttagCAAGACTATAGAGACAAAGTAGATTAAGATAATACGAAAATATAAGTTTGCAACATCCAACAGCAGAACGAGCTGGTTTTAacctctaaaaatgaatggaagtgaacgaGACccgaagtctcgagccaaaaagattcaatttGCTGCGCCCCCTCATAcctgaagaataaggtgaatagtttGCAAATATCTCAGTTTTACAATATTAGAATGCCAATTTCGTCTTAAACTAAAGAACTAAAACACACTGCAAAAGCGATTAGTTgctttaattaacaaattaacaattGTGTAAACCCGTTATCTTAAAAATGACAAGTTGCTTGGAACTGTTACATTGACTTAATTTTGAAACTTATACACCTAATTATATATGcacaattttaaggcaacaggtttaccacttcgaatgttatcattctattgaatgggcattatcagtggttatcagctgatagatatggaccTTCTTTGCCTACTGGAGTGCTGTtgtccatccacatggttaatcagctgtaGTACGCAAGTACGCAAGCTGGCCTTGGGGTGGtagcttttcaaaaggtaaacatttgtacttaaaggggccatattggtacctcaaaagtaaatattagtaactaaaaatgtaaaaggaacacttttgtactttttaagtactaatatgtacccttgaggtattactacggaccttttaggtacatatttgtaccttttaaaaaggtaccacctcaaggacagcttgcgtacctttatttctgagagcgttgagaagactccagatccagatttgtttttacataacAGTGACAGCTGGGTTTAGAGTCGGGGTCggggtagacataaataaaaaacaattaattagaAATttgatgaataatataaataattaacttttttaaatgtgatctgtagctgattaatcatgtggatggatattaacagccttctgagccaatCAGTAGGCGCAGAAAATCCCCACTGGTCCATATCTATCAGATGATAACGCCCATTTAATGGAGTAATAACATTCGAATCagttggatttactcattttttgaAAGGAAGGTCAAATAATCATGATATATATGCACTTTCAATTGTATCCAGATTAAATATGCCTTAATTCCCACTTATGTTTTTTGAGTTTACTGTAACACGCACCCTCTTAGCACTAATAAAGACCTGAGCAAGA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-160113-121 No description available

Ensembl:

ensembl_id ENSDARG00000105422

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060113 True 3223 mRNA 0.41 4 15841523 15851953

Neighbor

gene id symbol gene type direction distance location
XLOC_030921 NA coding downstream 23966 15813775 ~ 15817557 (-)
XLOC_030920 BX649391.1 coding downstream 106943 15734525 ~ 15734580 (-)
XLOC_030919 CR384085.1 coding downstream 149493 15690639 ~ 15692030 (-)
XLOC_030918 CU694999.1 coding downstream 316741 15523008 ~ 15524782 (-)
XLOC_030917 taok3a coding downstream 347226 15359995 ~ 15494297 (-)
XLOC_030923 xbp1 coding upstream 92458 15944411 ~ 15948920 (-)
XLOC_030924 coq5 coding upstream 276261 16128214 ~ 16139600 (-)
XLOC_030925 kremen1 coding upstream 299991 16151944 ~ 16274058 (-)
XLOC_030926 NA coding upstream 427287 16279240 ~ 16351306 (-)
XLOC_030927 NA coding upstream 501044 16352997 ~ 16356940 (-)
XLOC_030915 NA non-coding downstream 531415 15307539 ~ 15310108 (-)
XLOC_030913 CR936518.1 non-coding downstream 625739 15186823 ~ 15215784 (-)
XLOC_030911 NA non-coding downstream 665425 14780842 ~ 15176098 (-)
XLOC_030930 CR450719.1 non-coding upstream 593396 16445349 ~ 16445465 (-)
XLOC_030933 CR392021.1 non-coding upstream 1046970 16898923 ~ 16899047 (-)
XLOC_030934 CR759970.1 non-coding upstream 1188668 17040621 ~ 17041288 (-)

Expression


Co-expression Network