XLOC_030935 (si:ch211-130h14.6)


Basic Information

Item Value
gene id XLOC_030935
gene name si:ch211-130h14.6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 17599870 ~ 17602206 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060141
atttattagagcagctgtcgatgtgggcaggtgttcataaaacgtgatttttatagttttgcgtgactcctttttcattgcccgggatttagcaggcagacgcagcttctgcaatggtcgacattaactgctcccagcagcggatctgattaacacgataccaaagtgattttgttacctgtggatcttcaaacttcacatccagagttgtgaggaatcagaggtgcatgcggctgcccacgggaaaaatttgccatcagcccaacacagtttggattatcataggactgtcagaggtttgccaaacctgtcaaatgcatgatggctcctgtttggacttaccgatgtcctcgacttcaagtatccatcaaaactgtatacatttgagatatattagagactctttgtgggactggacattatgcatcctaaatcttcatcaaaatatgcaaatctcctcactgagttgccttggatgatttctcaataggatctggtattattaatgtttttatttatgtattgtgtatgtgtagccacattaatggcctattttgtagtcactattaaaaggaacattgattgatattgaatacatgttatggtctttaatccatcttcccattcttatttaattgttattgacaggaaagtctgtttatctgtttttactagtgtatattgtgcttacaatatagaaacgaagatttattttctgaggttacagccagaagtcaattaaattagttttaaatgacatatgcatggttaattttatttagatcattaagttcataatacttaattaaaatgagtacagtcaacatatagcaatgtataagtaagttaagttt
>TCONS_00060142
gtgtgggggttcagtttgctagcgctaacttagctaaagttagctcacctaagttatagcagcacattaaggatggatattaaatgcagaaacgtatgcaacagttaagtagtttgtgtttaacgtaagagaaagtataacttaaagtttgtgttttagagatttagtccataagttttttaatgctgcatagtgaataaattacagatttacaatttattttaacttaaattacatttactactgatgtttacagaaccatttaaattgtatgcacctcattctaaaatgcatgttcttggtctttagataccaaagtgattttgttacctgtggatcttcaaacttcacatccagagttgtgaggaatcagaggtgcatgcggctgcccacgggaaaaatttgccatcagcccaacacagtttggattatcataggactgtcagaggtttgccaaacctgtcaaatgcatgatggctcctgtttggacttaccgatgtcctcgacttcaagtatccatcaaaactgtatacatttgagatatattagagactctttgtgggactggacattatgcatcctaaatcttcatcaaaatatgcaaatctcctcactgagttgccttggatgatttctcaataggatctggtattattaatgtttttatttatgtattgtgtatgtgtagccacattaatggcctattttgtagtcactattaaaaggaacattgattgatattgaatacatgttatggtctttaatccatc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092687

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060141 False 854 processed_transcript 0.36 3 17599870 17602206
TCONS_00060142 True 770 mRNA 0.35 2 17600106 17601759

Neighbor

gene id symbol gene type direction distance location
XLOC_030934 CR759970.1 coding downstream 558582 17040621 ~ 17041288 (-)
XLOC_030932 galnt9 coding downstream 603388 16797209 ~ 16996482 (-)
XLOC_030933 CR392021.1 coding downstream 700823 16898923 ~ 16899047 (-)
XLOC_030931 atad1a coding downstream 808647 16677264 ~ 16791223 (-)
XLOC_030929 piwil2 coding downstream 1124188 16428411 ~ 16475682 (-)
XLOC_030936 si:dkey-112e17.1 coding upstream 246459 17848665 ~ 17876709 (-)
XLOC_030937 zdhhc8b coding upstream 278868 17881074 ~ 18007077 (-)
XLOC_030938 rnf215 coding upstream 437848 18040054 ~ 18046053 (-)
XLOC_030939 NA coding upstream 686604 18288810 ~ 18289576 (-)
XLOC_030940 NA coding upstream 715697 18317903 ~ 18424637 (-)
XLOC_030930 CR450719.1 non-coding downstream 1154405 16445349 ~ 16445465 (-)
XLOC_030927 NA non-coding downstream 1242930 16352997 ~ 16356940 (-)
XLOC_030926 NA non-coding downstream 1248564 16279240 ~ 16351306 (-)
XLOC_030942 NA non-coding upstream 1181532 18783738 ~ 18784434 (-)
XLOC_030949 NA non-coding upstream 1406440 19008646 ~ 19008774 (-)
XLOC_030951 NA non-coding upstream 1710569 19312775 ~ 19315648 (-)

Expression


Co-expression Network