XLOC_030939


Basic Information

Item Value
gene id XLOC_030939
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 18288810 ~ 18289576 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061967
AGCGACTCCAGATGTGCCAAATCTCCCTCTGAATTATCAGTAATTCCACTCTTTCCTCTGCTAATCACAAGGAGATTGGACACATCAGAATGACTTGAGGGAGAGAAATCATCTACTGCCATGTTTGCTTCGCATCAAACTGTGAGATTGGCACAAACAGAGTTCATCGTGGGCTGTTCTGAGTACCGGGAGCCATTGTGTAGTTCTGCGATGGATTTCATGACAACGACTCCCCTTTGTGATTGTTTATGCCAGTGCAATTGAGGTCAGCACAAACACTCTAATCAAATGGTTGTGATGCAATGGAAGATTAGCCATGATTGTTTTTCTGTTCATAATTGTGCATTTTAGATGGCGTGATTTTTAATACAGCAATGTAAAATCAGCAGCGGCTCTGTTGCTAAACTGTGCTTTCAGCTTGTGGTTTGTAGGGAATTAACACTTTTGAATAAATCATATACCCTGAGAGCAAAGTGGAGTATACAAGTGTGCTTAAGGACATCTTGTTTACTAGCTGTTAAGTATCTTAAAATTCTCAGACACACTTTAAAGATTCAATGGCATTT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061967 True 566 lncRNA 0.40 2 18288810 18289576

Neighbor

gene id symbol gene type direction distance location
XLOC_030938 rnf215 coding downstream 242757 18040054 ~ 18046053 (-)
XLOC_030937 zdhhc8b coding downstream 281733 17881074 ~ 18007077 (-)
XLOC_030936 si:dkey-112e17.1 coding downstream 412101 17848665 ~ 17876709 (-)
XLOC_030935 si:ch211-130h14.6 coding downstream 686604 17599870 ~ 17602206 (-)
XLOC_030934 CR759970.1 coding downstream 1247522 17040621 ~ 17041288 (-)
XLOC_030940 NA coding upstream 28327 18317903 ~ 18424637 (-)
XLOC_030941 TMEM132C coding upstream 141825 18431401 ~ 18513950 (-)
XLOC_030942 NA coding upstream 494162 18783738 ~ 18784434 (-)
XLOC_030943 aacs coding upstream 537738 18827314 ~ 18897482 (-)
XLOC_030944 bri3bp coding upstream 615392 18904968 ~ 18911114 (-)
XLOC_030933 CR392021.1 non-coding downstream 1389763 16898923 ~ 16899047 (-)
XLOC_030930 CR450719.1 non-coding downstream 1843345 16445349 ~ 16445465 (-)
XLOC_030927 NA non-coding downstream 1931870 16352997 ~ 16356940 (-)
XLOC_030926 NA non-coding downstream 1937504 16279240 ~ 16351306 (-)
XLOC_030949 NA non-coding upstream 719070 19008646 ~ 19008774 (-)
XLOC_030951 NA non-coding upstream 1023199 19312775 ~ 19315648 (-)
XLOC_030952 NA non-coding upstream 1044630 19334206 ~ 19336527 (-)

Expression


Co-expression Network