XLOC_030996 (GPR83)


Basic Information

Item Value
gene id XLOC_030996
gene name GPR83
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 22363015 ~ 22369916 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060224
ATGACATTCAGAAACACCTCTGTGGATTTATTTTCGCAGTTTTACATCTTGCAAAATTTCTCCACGTTCTTTAATTTCTCCCTGGACTCGATGTACGACAGAGGATCGAATTACGAGTCTGAATCCCACAGACCGACCATCAGAGCGCTGCTCATCGTCGCGTATTCCGTAATCATCATCATCTCGCTTTTCGGAAACGTGGTCGTTTGTCACGTTGTTATTAAGAATAAACGGATGCACTCAGTGACAAGTTTGTTCATTATGAATTTAGCCATTGCTGACATTCTCATAACTCTCCTCAACACGCCTTTTACTCTGGTTCGATTTGTTTACAGCACATGGGTGTTTGGGAAGGTGATGTGCCATGTGAGCCGCTTTGCACAGTATTGTTCTGTCCATGTCTCTGTTCTCACACTGGTTGCCATCGCCATTGACAGACACCAGGTGGTGATGCATCCAATGAAGCAGCGGATGTCTCGGCTTCAGGGCATTGCCTGGATCGGCGTCATCTGGGTCATGGGCTCCTGCTTCTCTCTACCTCATGCCATTTACCAGAAACTGCTGCGCTTTGAATTTGGCAATAACAGAGTGCGGATGGTTTGCTGGCCCAGTTTCCCTCATCCCTCCGATCTCTTCTGGAAGTATCTGGATCTAGCCTCATTTGTCCTCCTCTACGTATTGCCTTTAGCGATTATCTCCATATCATATCTTGTGGTGGCCAAGAAGGTTTGGTTCCAGAATGCTGTTGGTGACGTTACACTGGCTCAGTCAGCCGCTCAGCGCAGGAGAAAGAAAACCACTTTGAAGATGCTGATTGCGGTGGTGGCCGTGTTTGCCGTCTGCTGGTTTCCTCTGAACTGCTACATCGTGCTGCTGTCAAGTAAAGTGATCCAAGCTAACAATGCTGTGTATTTTACATTCCACTGGCTGGCCATGAGCTCTACTTGCTATAATCCTTTCATATACTGCTGGCTCAATCACAGCTTTCGAGCAGAACTCCGAGCTCTGCCTGTGATTGGACGGATAGCCAAAGGCAATGCCATCCAGCAATCCTAA

Function

symbol description
gpr83 Predicted to enable neuropeptide receptor activity. Predicted to be involved in neuropeptide signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human GPR83 (G protein-coupled receptor 83).

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04030 G protein-coupled receptors

Ensembl:

ensembl_id ENSDARG00000058120

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060224 True 1056 mRNA 0.47 4 22363015 22369916

Neighbor

gene id symbol gene type direction distance location
XLOC_030995 NA coding downstream 127857 22230690 ~ 22235158 (-)
XLOC_030994 las1l coding downstream 232078 22115250 ~ 22130937 (-)
XLOC_030993 CR812469.1 coding downstream 266107 22087656 ~ 22096908 (-)
XLOC_030992 zc4h2 coding downstream 280097 22073710 ~ 22082918 (-)
XLOC_030991 mtmr8 coding downstream 310163 22027588 ~ 22052852 (-)
XLOC_030997 BX546499.2 coding upstream 65870 22435786 ~ 22438595 (-)
XLOC_030998 NA coding upstream 83914 22453830 ~ 22455994 (-)
XLOC_030999 NA coding upstream 85650 22455566 ~ 22457289 (-)
XLOC_031000 sptbn4a coding upstream 95170 22465086 ~ 22501663 (-)
XLOC_031001 NA coding upstream 136529 22506445 ~ 22510064 (-)
XLOC_030987 NA non-coding downstream 428737 21926822 ~ 21934278 (-)
XLOC_030984 NA non-coding downstream 510788 21609358 ~ 21852227 (-)
XLOC_030985 CR848717.1 non-coding downstream 625670 21736359 ~ 21737345 (-)
XLOC_031008 NA non-coding upstream 586979 22956895 ~ 22974641 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000339_01242435_01246985 NA coding CI01000339 null 1241131 ~ 1246985 (-)