XLOC_030998



Basic Information


Item Value
gene id XLOC_030998
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 22453830 ~ 22455994 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00061991
TCAATTTCTCTCTGGTACTTCCTGTGAGCCAAGTTTCAGACACAGCATTGGGTTTCTTATCAGAATTTCTCCTTATCATTTCAGATGGCAAGTGGTTCACAGTCAGTTCTTCACGTTTGGTGGTTGAATGATAATGTAGGGTCAGTCTCTGCTGTTTGAAGGATTTCTTGGTGTCACTGAGATACTTGGCTGCTCCACTAACATTGATGAGTCCACTTAAAAAACTCAGTTTTAGACAATCATTAATGTTCAGTAATTGGCATTTTGCCTCAATAAAGTCTGAA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00061991 True 284 lncRNA 0.39 2 22453830 22455994

Neighbor


gene id symbol gene type direction distance location
XLOC_030997 BX546499.2 coding downstream 15235 22435786 ~ 22438595 (-)
XLOC_030996 GPR83 coding downstream 83914 22363015 ~ 22369916 (-)
XLOC_030995 NA coding downstream 218672 22230690 ~ 22235158 (-)
XLOC_030994 las1l coding downstream 322893 22115250 ~ 22130937 (-)
XLOC_030993 CR812469.1 coding downstream 356922 22087656 ~ 22096908 (-)
XLOC_031000 sptbn4a coding upstream 9092 22465086 ~ 22501663 (-)
XLOC_031001 NA coding upstream 50451 22506445 ~ 22510064 (-)
XLOC_031002 glra4b coding upstream 59353 22515347 ~ 22544151 (-)
XLOC_031003 aifm1 coding upstream 94620 22550614 ~ 22573673 (-)
XLOC_031004 casp22 coding upstream 129275 22585269 ~ 22602979 (-)
XLOC_030987 NA non-coding downstream 519552 21926822 ~ 21934278 (-)
XLOC_030984 NA non-coding downstream 601603 21609358 ~ 21852227 (-)
XLOC_031008 NA non-coding upstream 500901 22956895 ~ 22974641 (-)
XLOC_031012 BX640521.1 non-coding upstream 766707 23222701 ~ 23222819 (-)
XLOC_031015 CT025748.1 non-coding upstream 875159 23331153 ~ 23341623 (-)
XLOC_031017 NA non-coding upstream 990250 23446244 ~ 23456234 (-)

Expression



Co-expression Network