XLOC_031242 (BX927323.1)


Basic Information

Item Value
gene id XLOC_031242
gene name BX927323.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 36934568 ~ 36943975 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060669
TGACCACAGGACCAGTAGAGGGAGCTGTTTCTTTCCTACGGGATTCAACAACCGCGAGACATAGCACCTGGAATTTGTGGTCGAGGCAGTCCACAGTGCTGAAGTTGAGCTTCCAGGCCTGCTGGTCCTTGTAGTCAAGGCAGTCTACCGAACTGAAGCCCAACGACGCAGTGCTGTATCCCTGGGAGGAGAGAGAGGGCGACTGGCTGAGCGAGCCGCCCATGGAGGGCACGGTGAGGGGGGAGAGGGCGCCTCCACTTGCTGACAGCTGGGTGGTCATGGGAGAAAGGTACGGGCTGCAATCCAATCCGCTGAAGTAAGGAGAAGAGCCATAGCCCTGGCTGTAGGAAGAGGGCTGACCGTAGCTCATGGGATATGGAGCAGGACGCTGCACGCAGGGGGTGCCTGAACCACACAGTGGATCAGGGAGGGGGGAAAGAGAAGTGGGACTCCATACAGAAACTGGTGCTGTGCCTGCGCTCACACTAGGGGGCACGGTCGGGGTCGGGGCAGCCACCACCGAGGAGCTAGTGCCAGGGTCAGAGGTCAGATCAGGGGGAGGGGAGGACTTCTTTTTGGGGGGACGGGGCTTGGGCTGACCGCtggtctgctgctgctgctggcggCATTTAGCACGACGGTTCTTAAACCACAcctgaaaaaaaacaatggagTTATTGATGGATTGTTTTAAgacaaatttgggtaaaatataaaaatacaaacttttttgtgttaaaaattagtttagaaatttaACCAAATGGCTGGCTTATTTCATTGCAGATCAAGGAATGAATATACTATAGAAACTATCATCTCATG

Function

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0022402 cell cycle process biological_process
GO:0051128 regulation of cellular component organization biological_process
GO:0022607 cellular component assembly biological_process
GO:0006974 cellular response to DNA damage stimulus biological_process
GO:0006996 organelle organization biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0007017 microtubule-based process biological_process
GO:0007049 cell cycle biological_process
GO:0007088 regulation of mitotic nuclear division biological_process
GO:0033043 regulation of organelle organization biological_process
GO:0000226 microtubule cytoskeleton organization biological_process
GO:1903047 mitotic cell cycle process biological_process
GO:0032506 cytokinetic process biological_process
GO:0010564 regulation of cell cycle process biological_process
GO:0006281 DNA repair biological_process
GO:0016338 calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules biological_process
GO:0000278 mitotic cell cycle biological_process
GO:0016043 cellular component organization biological_process
GO:0005657 replication fork cellular_component

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097813

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060669 True 825 lncRNA 0.53 2 36934568 36943975

Neighbor

gene id symbol gene type direction distance location
XLOC_031241 kptn coding downstream 10059 36913423 ~ 36924509 (-)
XLOC_031240 NA coding downstream 27189 36903146 ~ 36907379 (-)
XLOC_031239 ckma coding downstream 96722 36832079 ~ 36837846 (-)
XLOC_031238 NA coding downstream 105495 36821874 ~ 36829073 (-)
XLOC_031237 BX005407.1 coding downstream 260429 36641200 ~ 36674139 (-)
XLOC_031243 h3f3c coding upstream 558 36944533 ~ 36949476 (-)
XLOC_031244 ftr99 coding upstream 96878 37040853 ~ 37047166 (-)
XLOC_031245 il13ra2 coding upstream 157418 37101393 ~ 37117778 (-)
XLOC_031246 lrch2 coding upstream 188041 37132016 ~ 37264495 (-)
XLOC_031247 NA coding upstream 322969 37266944 ~ 37272311 (-)
XLOC_031231 BX005476.1 non-coding downstream 1111020 35823418 ~ 35823548 (-)
XLOC_031229 NA non-coding downstream 1393588 35523409 ~ 35540980 (-)
XLOC_031221 BX530075.3 non-coding downstream 2100475 34833978 ~ 34834093 (-)
XLOC_031249 NA non-coding upstream 536472 37480447 ~ 37483020 (-)
XLOC_031250 NA non-coding upstream 648301 37592276 ~ 37603735 (-)
XLOC_031251 NA non-coding upstream 764727 37708702 ~ 37711850 (-)
XLOC_031259 BX640520.1 non-coding upstream 1091362 38035337 ~ 38038217 (-)

Expression


Co-expression Network