XLOC_031259 (BX640520.1)


Basic Information

Item Value
gene id XLOC_031259
gene name BX640520.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 38035337 ~ 38038217 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060704
TTCAAAGAAGACAAAAGGACtccagtttgatcaggtgtggcTGAAACTCAACTGCGCAGAGCTCCGTCTCTTCAGGAACTGAGTCGCCTGTGGCCTAGATTATAAATTTGCTTTCACTTTCTTATTCTTTCAACCTCAACCCCTTCCTTGGTTAAGTGTATAGCGTTAAGGTGATCAACCTTTGTTCAGTAAGATTTCTTGGAACAACTGTAGGCTACTCAAGATATAAGCGAACGTTTTTTATCCCTTCACTTCAGAATATAATGTTGAGTAGAATTTTTTATACAATCGTAACACCTAAAAATGTGGAACAAACAGCTCAAGAATTCAAGAAAAATCTAAAGAAGAAGATAAAAAATGTTAGATTAAAAAACCCTGAGGAGGGACATCGCAAAAAGACAAGAGAAACGCCCAGTGATGTTTACCTGGCTTTCTGTCCAGTAGTTTCTGACACTAAAACTAACATTGATGCAACACTCAAGAATATTAAAGACGATAAGCCGACCATTTTAGTGGTGCTTCATCAAACACTTGAGAAGGAGGCTGTTGTGTCAAAAAGCAGTACATTTGTGGAAAGGGAGAATATGCTTGTTCTTGACTGTCTGTTCTACGAGGGTAAAGGCTTGCTTGCCTGTAAAAAAAATGAGGAGGCTTATAAAGAAGCTGCAAACCGTTCTTCAAAGAAAAACCAAAAAGTAGCTGATGACAATTCAAGCCGCAAGCAGGACACATCCTCCCCAGATGTCCGGTCTAGTAGAAATGATCATAATAGAGATGAACGCAAAAAACGTGATGCCTCCAAGAAAAAAACGAAAACTTGTGTTTTTCTCTGAACAGTGGAATTGATCACATCAGGCAAGCAACGCAAAATGCGACaaactttaaaattttaaattctgCACATCTTTATTGGAAAACAACATGGtggataaatttttttattgtttcatatgtttta

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093036

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060704 True 958 processed_transcript 0.38 6 38035337 38038217

Neighbor

gene id symbol gene type direction distance location
XLOC_031258 si:ch211-139a5.1 coding downstream 37528 37981800 ~ 37997809 (-)
XLOC_031257 mpzl2b coding downstream 71574 37948283 ~ 37963763 (-)
XLOC_031256 scn4bb coding downstream 99716 37918810 ~ 37935621 (-)
XLOC_031255 tmprss13b coding downstream 134942 37888095 ~ 37900395 (-)
XLOC_031254 si:ch211-139a5.9 coding downstream 149260 37884022 ~ 37886077 (-)
XLOC_031260 si:dkey-111e8.5 coding upstream 22742 38060959 ~ 38064065 (-)
XLOC_031261 si:ch211-284e13.4 coding upstream 50377 38088594 ~ 38094130 (-)
XLOC_031262 si:ch211-284e13.14 coding upstream 66684 38104901 ~ 38107741 (-)
XLOC_031263 si:ch211-284e13.6 coding upstream 72167 38110384 ~ 38122126 (-)
XLOC_031264 gucy2d coding upstream 85416 38123633 ~ 38161033 (-)
XLOC_031251 NA non-coding downstream 323487 37708702 ~ 37711850 (-)
XLOC_031250 NA non-coding downstream 431602 37592276 ~ 37603735 (-)
XLOC_031249 NA non-coding downstream 552317 37480447 ~ 37483020 (-)
XLOC_031247 NA non-coding downstream 763026 37266944 ~ 37272311 (-)
XLOC_031242 BX927323.1 non-coding downstream 1091362 36934568 ~ 36943975 (-)
XLOC_031269 NA non-coding upstream 211827 38250044 ~ 38255744 (-)
XLOC_031276 NA non-coding upstream 576651 38614868 ~ 38633719 (-)
XLOC_031277 NA non-coding upstream 582740 38620957 ~ 38622971 (-)
XLOC_031280 BX640512.1 non-coding upstream 659279 38697496 ~ 38705831 (-)
XLOC_031284 NA non-coding upstream 752515 38790732 ~ 38791845 (-)

Expression


Co-expression Network