XLOC_031263 (si:ch211-284e13.6)


Basic Information

Item Value
gene id XLOC_031263
gene name si:ch211-284e13.6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 38110384 ~ 38122126 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060709
CGGCTCGCGCTTGGCTCTGCTGTCACGCGCGTCAAAGCTGCGTCTGTCCGCGGCGCATCTCCTGCTCGCAGCGTTCAGGCTTTCGGCTTCAAACTGCGCGAACCGCCGCTCTTCCCCAACCCCCGTTCAGCGCTCCGGCAGCGAGGCGGGGCCAGCCCAAATAAATGTGGGGAGGGGAAAAACGAAGACAACAAACCTTAAAAATGTAGGCCACGGCGCGTGACCCAGTTCCTCGCGAACAACACAGCGAGTGTGAATGTGGAGCACGGTTATTATCCCCCACGCCCGGCACGGTTCCAGGGCGGCTTcaactgtCCTGGCCTGTGAGGAGCAAATTCACCCATCCACCCACCCGTTCATCCACCCACGCGGTGTGAAATCCACACCCCCTCAAGAGTGCAGCGAGGGAAACAAAAGTACCATTGTGCACTTACAGGGATGGAGGACAGGAGGCACCTGCCTCCAGATGGAGGTGGAAACCTCAAGCGCTCCTCCCCAGCAGAGTGTGGTACAGAGGAGAGAGCGGTCAGCAAGGAGCAGGGAGACCCTGAGACCTCCACACCAATGCGTGTGAGAAAAGATGATCTCTGTGACGTTCCCCGCAAGGTGCCTCGTTTCCAGTATGTGGATTTCCCTTCCCTGCACCAGTGCATCCAGCAGCTTTCTGTGCCTCCTCTGAACGGCTGGCTGGGATCCTGCTCGCTGGCAAAAGCCCCAAACTACAGGCCTGCCAGTCCCAAGGAGAAGGTGCCCAAGTTTAAATACGTGGATTATCCATCTCTCCACCACTGCATTCAGCAGCTGTCTGTGCCTCCACTTGAAAGCTGGAGCGCAGGGCTGGTCAGGTTTAATGCAGAGGGGGGACAACAGAGGCCCTCACAAGTTGGGACAGTGAAGAAGAGCCAGAGAAATGATGGAGGAGATCAAAACACCCAGGACAGAAGTAGAGGCACAGCATTTACTTTCGAGAGAGACACTCACAGCTCAGTCTCAGGCAGGGAGGAGGCCCAACAGAGGATGGAGAAAAGTAAACCAGAAGCTGGTCTGCGATCAGAGTACAGTTGCAGGTTTGAATCTGGTTCTGGATCTCAGAGCAACACGGCAGTGATGAGAAACGTCAGACCGTCTGTGATTAGCATGGTACACACAGATAAACAGAAGCACTGGACAAAGTCAGATCACTTGGAAGAACAGTTGAACTCTCCAGATTCAGTTGGACGGGTGCCGTGGAGTACCCTCCCAGAGTCAGTCTGCCCATTCTGCCAACAGATGTTCACAAACCCAGAGCAGTTCAGGGCTCACCAGCGGAGTCACAGAGATAAGAGACCAAACTGATGTGCAGAAACACTGAGAGAGAGCTGCATCTGGCGAACAGTTACCGCCACATCAGGAATCTCATCATCAGAGGCCTTCTCGTGTTGGCTGTAGTGGTGATCGCTGGCAGGATCAAAGACACGTTAAACACATTAGACAGTTTGGGTTCAGACCTTAGGGAGAATGCAAGCCTTAGTCTTGACTGACGGTGTGAAGTCTAAAAAGGCCCGACAGATACATACAAGCATACAATCTGGATGCTCgactgcacgcacacacatgctcacacacaaggGGGCTGACATACAAACACATAGCAAGCGTGTCCTATTTATGGTTCAGGAGAGGTCAATATTTACTGCCCACACAAGAACCCTCAGACATAATGGGGTTTCAGCTCAAGGCTGAGGATTAGAAGCAGATTTACAGTCTCTTCCGCTCATATCTGCGTGTTTACAGGGCTTGAAGGACTGGTGCTTAACAGGATGGCTTTTATTACATACATGTTCCCCACACTGTGTGCATGGCGGCAGGCTAAACATTTAGCTATGGGTGCCTACAGAATAATGGTTATGTTAATGCTGCACAAACAAACAGGCTTGttaataatttgttactttagctttttgttattttgtatttttatgttttttggaaGTTAATGTCTAGTGGCTTCAAGCTGGTAGCTTTCAATATTACAAATGTACCGCTTGTTTTCAAGTGTTTTAACTGTGTGAGTAAAAGTTTTTTCATACAAAAA
>TCONS_00060711
GTAAAGTGTCGCTGATACTAACACAGGATAATTCATACCGTGCCAACGTTGTTTTTAAATTGAAGACAAGCTCCTTCAAGAAACCAAACGCCTTATTTGACCATAGGAATAGTTTGCTTATGGTTTATTCCCAATTATGTGCAGCCGATAAAGCTCtttcttctttaaaaagacgAACACAATTTCGGCTAAATCGACGGAGAACTCACTTGACATGCACTTCACGGACTTCCACGGACTACTACTGTAACACAAGGAAACAAAAGTACCATTGTGCACTTACAGGGATGGAGGACAGGAGGCACCTGCCTCCAGATGGAGGTGGAAACCTCAAGCGCTCCTCCCCAGCAGAGTGTGGTACAGAGGAGAGAGCGGTCAGCAAGGAGCAGGGAGACCCTGAGACCTCCACACCAATGCGTGTGAGAAAAGATGATCTCTGTGACGTTCCCCGCAAGGTGCCTCGTTTCCAGTATGTGGATTTCCCTTCCCTGCACCAGTGCATCCAGCAGCTTTCTGTGCCTCCTCTGAACGGCTGGCTGGGATCCTGCTCGCTGGCAAAAGCCCCAAACTACAGGCCTGCCAGTCCCAAGGAGAAGGTGCCCAAGTTTAAATACGTGGATTATCCATCTCTCCACCACTGCATTCAGCAGCTGTCTGTGCCTCCACTTGAAAGCTGGAGCGCAGGGCTGGTCAGGTTTAATGCAGAGGGGGGACAACAGAGGCCCTCACAAGTTGGGACAGTGAAGAAGAGCCAGAGAAATGATGGAGGAGATCAAAACACCCAGGACAGAAGTAGAGGCACAGCATTTACTTTCGAGAGAGACACTCACAGCTCAGTCTCAGGCAGGGAGGAGGCCCAACAGAGGATGGAGAAAAGTAAACCAGAAGCTGGTCTGCGATCAGAGTACAGTTGCAGGTTTGAATCTGGTTCTGGATCTCAGAGCAACACGGCAGTGATGAGAAACGTCAGACCGTCTGTGATTAGCATGGTACACACAGATAAACAGAAGCACTGGACAAAGTCAGATCACTTGGAAGAACAGTTGAACTCTCCAGATTCAGTTGGACGGGTGCCGTGGAGTACCCTCCCAGAGTCAGTCTGCCCATTCTGCCAACAGATGTTCACAAACCCAGAGCAGTTCAGGGCTCACCAGCGGAGTCACAGAGATAAGAGACCAAACTGATGTGCAGAAACACTGAGAGAGAGCTGCATCTGGCGAACAGTTACCGCCACATCAGGAATCTCATCATCAGAGGCCTTCTCGTGTTGGCTGTAGTGGTGATCGCTGGCAGGATCAAAGACACGTTAAACACATTAGACAGTTTGGGTTCAGACCTTAGGGAGAATGCAAGCCTTAGTCTTGACTGACGGTGTGAAGTCTAAAAAGGCCCGACAGATACATACAAGCATACAATCTGGATGCTCgactgcacgcacacacatgctcacacacaaggGGGCTGACATACAAACACATAGCAAGCGTGTCCTATTTATGGTTCAGGAGAGGTCAATATTTACTGCCCACACAAGAACCCTCAGACATAATGGGGTTTCAGCTCAAGGCTGAGGATTAGAAGCAGATTTACAGTCTCTTCCGCTCATATCTGCGTGTTTACAGGGCTTGAAGGACTGGTGCTTAACAGGATGGCTTTTATTACATACATGTTCCCCACACTGTGTGCATGGCGGCAGGCTAAACATTTAGCTATGGGTGCCTACAGAATAATGGTTATGTTAATGCTGCACAAACAAACAGGCTTGttaataatttgttactttagctttttgttattttgtatttttatgttttttggaaGTTAATGTCTAGTGGCTTCAAGCTGGTAGCTTTCAATATTACAAATGTACCGCTTGTTTTCAAGTGTTTTAACTGTGTGAGTAAAAGTTTTTTCATACAAAAA
>TCONS_00060710
GTAAAGTGTCGCTGATACTAACACAGGATAATTCATACCGTGCCAACGTTGTTTTTAAATTGAAGACAAGCTCCTTCAAGAAACCAAACGCCTTATTTGACCATAGGAATAGTTTGCTTATGGTTTATTCCCAATTATGTGCAGCCGATAAAGCTCtttcttctttaaaaagacgAACACAATTTCGGCTAAATCGACGGAGAACTCACTTGACATGCACTTCACGGACTTCCACGGACTACTACTGTAACACAAGCCTGGCCTGTGAGGAGCAAATTCACCCATCCACCCACCCGTTCATCCACCCACGCGGTGTGAAATCCACACCCCCTCAAGAGTGCAGCGAGGGAAACAAAAGTACCATTGTGCACTTACAGGGATGGAGGACAGGAGGCACCTGCCTCCAGATGGAGGTGGAAACCTCAAGCGCTCCTCCCCAGCAGAGTGTGGTACAGAGGAGAGAGCGGTCAGCAAGGAGCAGGGAGACCCTGAGACCTCCACACCAATGCGTGTGAGAAAAGATGATCTCTGTGACGTTCCCCGCAAGGTGCCTCGTTTCCAGTATGTGGATTTCCCTTCCCTGCACCAGTGCATCCAGCAGCTTTCTGTGCCTCCTCTGAACGGCTGGCTGGGATCCTGCTCGCTGGCAAAAGCCCCAAACTACAGGCCTGCCAGTCCCAAGGAGAAGGTGCCCAAGTTTAAATACGTGGATTATCCATCTCTCCACCACTGCATTCAGCAGCTGTCTGTGCCTCCACTTGAAAGCTGGAGCGCAGGGCTGGTCAGGTTTAATGCAGAGGGGGGACAACAGAGGCCCTCACAAGTTGGGACAGTGAAGAAGAGCCAGAGAAATGATGGAGGAGATCAAAACACCCAGGACAGAAGTAGAGGCACAGCATTTACTTTCGAGAGAGACACTCACAGCTCAGTCTCAGGCAGGGAGGAGGCCCAACAGAGGATGGAGAAAAGTAAACCAGAAGCTGGTCTGCGATCAGAGTACAGTTGCAGGTTTGAATCTGGTTCTGGATCTCAGAGCAACACGGCAGTGATGAGAAACGTCAGACCGTCTGTGATTAGCATGGTACACACAGATAAACAGAAGCACTGGACAAAGTCAGATCACTTGGAAGAACAGTTGAACTCTCCAGATTCAGTTGGACGGGTGCCGTGGAGTACCCTCCCAGAGTCAGTCTGCCCATTCTGCCAACAGATGTTCACAAACCCAGAGCAGTTCAGGGCTCACCAGCGGAGTCACAGAGATAAGAGACCAAACTGATGTGCAGAAACACTGAGAGAGAGCTGCATCTGGCGAACAGTTACCGCCACATCAGGAATCTCATCATCAGAGGCCTTCTCGTGTTGGCTGTAGTGGTGATCGCTGGCAGGATCAAAGACACGTTAAACACATTAGACAGTTTGGGTTCAGACCTTAGGGAGAATGCAAGCCTTAGTCTTGACTGACGGTGTGAAGTCTAAAAAGGCCCGACAGATACATACAAGCATACAATCTGGATGCTCgactgcacgcacacacatgctcacacacaaggGGGCTGACATACAAACACATAGCAAGCGTGTCCTATTTATGGTTCAGGAGAGGTCAATATTTACTGCCCACACAAGAACCCTCAGACATAATGGGGTTTCAGCTCAAGGCTGAGGATTAGAAGCAGATTTACAGTCTCTTCCGCTCATATCTGCGTGTTTACAGGGCTTGAAGGACTGGTGCTTAACAGGATGGCTTTTATTACATACATGTTCCCCACACTGTGTGCATGGCGGCAGGCTAAACATTTAGCTATGGGTGCCTACAGAATAATGGTTATGTTAATGCTGCACAAACAAACAGGCTTGttaataatttgttactttagctttttgttattttgtatttttatgttttttggaaGTTAATGTCTAGTGGCTTCAAGCTGGTAGCTTTCAATATTACAAATGTACCGCTTGTTTTCAAGTGTTTTAACTGTGTGAGTAAAAGTTTTTTCATACAAAAA

Function

symbol description
si:ch211-284e13.6 Predicted to enable metal ion binding activity.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060526-163 Predicted to enable metal ion binding activity.

Ensembl:

ensembl_id ENSDARG00000092354

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060709 False 2074 mRNA 0.51 4 38110384 38121612
TCONS_00060711 False 1923 mRNA 0.47 3 38110384 38122126
TCONS_00060710 True 2015 mRNA 0.48 4 38110384 38122126

Neighbor

gene id symbol gene type direction distance location
XLOC_031262 si:ch211-284e13.14 coding downstream 2643 38104901 ~ 38107741 (-)
XLOC_031261 si:ch211-284e13.4 coding downstream 16254 38088594 ~ 38094130 (-)
XLOC_031260 si:dkey-111e8.5 coding downstream 46319 38060959 ~ 38064065 (-)
XLOC_031259 BX640520.1 coding downstream 72167 38035337 ~ 38038217 (-)
XLOC_031258 si:ch211-139a5.1 coding downstream 112575 37981800 ~ 37997809 (-)
XLOC_031264 gucy2d coding upstream 1507 38123633 ~ 38161033 (-)
XLOC_031265 si:ch211-284e13.12 coding upstream 45684 38167810 ~ 38170996 (-)
XLOC_031266 si:ch211-284e13.11 coding upstream 53914 38176040 ~ 38179220 (-)
XLOC_031267 si:ch211-284e13.9 coding upstream 71327 38193453 ~ 38197080 (-)
XLOC_031268 slc12a9 coding upstream 93798 38215924 ~ 38248462 (-)
XLOC_031251 NA non-coding downstream 398534 37708702 ~ 37711850 (-)
XLOC_031250 NA non-coding downstream 506649 37592276 ~ 37603735 (-)
XLOC_031249 NA non-coding downstream 627364 37480447 ~ 37483020 (-)
XLOC_031247 NA non-coding downstream 838073 37266944 ~ 37272311 (-)
XLOC_031269 NA non-coding upstream 127918 38250044 ~ 38255744 (-)
XLOC_031276 NA non-coding upstream 492742 38614868 ~ 38633719 (-)
XLOC_031277 NA non-coding upstream 498831 38620957 ~ 38622971 (-)
XLOC_031280 BX640512.1 non-coding upstream 575370 38697496 ~ 38705831 (-)
XLOC_031284 NA non-coding upstream 668606 38790732 ~ 38791845 (-)

Expression


Co-expression Network