XLOC_031264 (gucy2d)


Basic Information

Item Value
gene id XLOC_031264
gene name gucy2d
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 38123633 ~ 38161033 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060712
CTGAGAGGCTCTTGCTCCCCTGGCTTTCCCCAATAGACTCTTCAAAGTGGGGCAGGACTCGGGCCTCCAACCTCCAGGGACACCACACCAAGAAGAACTCTCCACCATAAAAAGGAAAAAGGATTTTTACGGCTCTAATATTTGTACTATTCTGTCCAAAGGCTTATCTACCTTTCCATCAGGTTTTTAATGGAATATCTGTCTTTTCTCTACGTGATATTTGGACTTTTCCATTTTTGATTTGGATTTTGTTATTTCTTTCTGCTATTTCTTCTGTGGGAGTGCAGTTCTGGTGTCCGTCTGGTTCCTCCCAGACTTTCTGTCTGTTCAATGGAGGCAGAACTCATCATGGCTCTTAATTAGCCACGCTTGGCAGACAGTGATGGCTGGTTATTGTGCAATAGTTTTGGGCTAGTGCCCCTCAGTGGGTAGAACCCAAACCGAGAGCTAAGTATTTCAGCCTTCACACTGACAAAACACTCACCAAACACACAACATCTCTCAGTGCCACCTGTTCTCTCTTCGTCTCTGAtattcaacaataaaacaaagataaaatgaatgacCACACAAGCTTTCTCTGCCAGTCCCACCACCCTCGATGGCAAACACAGTCTTCTGCTGGAAAGAGACGACGGAAACAATCCTCATCGCAAAAATCTGAAACCCCAGCGAGCCCAGTGTCCTCGTCCCCAGTGCTACGCAGCCACAGCTGGTGGGGAAACTGCTTTCTCCTTCCTCTAGTCATGCTTTCATACTTTCCCTGTGAAGCCTGGGGCACCACCTTCAAAATTGCCATTGTAGGACCGTGGGCATGTGACCCCATGTACTCTAAAGCCCTGCCAGATCTGGCTGCCCGATTAGCCATGAGCCGCATCAACAAAGACCCCGAACTCAATAAAGGCTACTGGTATGATTACACAGTCATTAACGAGGATTGCTCCAGCTCCAGAGGCCTGGCACGCTTTGCCGAGCTGGAGGGTTACGGTTCGGCTTTTCTAGGACCGGCAAACCCTGGCTACTGCACGGCTGCCACACTGCTGGCAAAGAACTGGAACAAAGGCATCCTATCCTGGGGTTGCCTGAAGGCTGAGATGGATGAAGAGATGTATCCCACCTTTCTGCGGCCGCTGCCGTTGTCCTCCCGGGTGCTTTTCTCTGTGCTGCGGTTCTTCCGTTGGGCACATGTTGGGATTGTAACTGCTGAGGGCGACATGTGGGAGGCAACTGGGCATGAGCTTGCAGCATCCCTGCGTGCTCTTGGCTTGCCCGTTGGTAAGGTTGTTACGATGGAACAGGACAAAGAGGGGCCACGGCAAGCCCTACAGGCAATACGGGACACAGATCGAGTAAGGGTTGTCATCATGTGCATGCACTCTgccctgattggtggagaggaacaGTATCAGTTGCTGACTACAGCATTGGAAATGAGAATGATTGACCGAGGGTACATCTTCATTCCATACGACACCCTGCTCTATTCACTGccatatgaaaatgtaaaatatccAATCCTGGCCAATGACAGCAAACTGCGACGAGCATACGATGGGGTCTTAACAGTAACCATGGACCAAGGGGAACAAAACTTTTATGAGGCCTTTAATGCAGCACAGGAATCCTTTGAAATCCGCGGCAGCACATCAGCTGAAGAGGTTTCTCCATTTTTTGGGACCATATATAACATGATCTATTATACAGCCATGGCTGCAGAGCAAAGCCGAGCTTCGAGTGGTGGGCGATGGGTATCGGGCGATTTACTGTCTCAAAACGAGGGTGGATTTGAATTTGATGGCTTTAACCAGCGGATATCGGGAGGTACTAACGGAGAGGGAATGCAGGTCCGCTATGCTGTCCTGGATTCAGACGGCTCTGGGTCCAGCCTGTATCGCACACACGCCCTGGAAGCTTCACACACATATGGAAAATATGGAGGGTTAAAATACTTGGGGAAGTCAATTCATTTTGCTGGAGCGTCTCCGAGCAGTGACGCGAACTGCTGGTTTAGTCCTTATATCGCATGTAGTGGAGGTAACAAAAACAACAGATTGGATGGAGTGACGCTTTTCTTCTTGCTCATGTTTTTCATAGTGTTGATAGCGGGTGCAGGCATCCTTTTTCTACAAGTTAGAAAATATGGGGCTGGAGGTTTTTTTGGTGCGTTTATTGGAGGAGGAGGAAGCCCCACTAAGATAGTGCTGACGCTGGATGACTTGGTCTTCATCAACACCACACTCAGCAGAAGGAAACTGAATGACGAGAGTATGCTGAAGAGTCAGCTAGATGTTAAAACCCCGCGCCACTCAGTCTCTGGTCGCAGTTACATCACATCAACCCCAGAAACATCCAATGTTGCTGTATTTGAGGTGTGGGAAATTTGTGAGTTTTTGTGTACTGGCATTGTGTTCGGTTCTATGATGAAGCAATATTACATGAGAAAGTGTGATTTTTTAACTGGATACCAGAAGGGTGACTGGGTCTGGTTAAAGAAATGCCCCTGTGCAGATTCTATTACAGAGATCAGTGAAAGCACACAGACCATCTTTGTCAAGCTGAGAGATATGCGTCATGAGAATCTGAACTTGTTCCTGGGTCTGTTTATGGATACTGGTATATTCGGCATTGTTACAGAGCACTGCACCAGAGGCAGTCTGGAAGACCTGCTCAACAATGAGGAAATGAGGCTTGACTGGATGTTCAAATCCTCTCTTCTCCTCGACCTGATTAGGGGAATGAAGTACTTGCATAATCGGGGCATTATTCATGGACGCCTGAAGTCTCGGAACTGTGTGGTGGATGGTCGATTTGTTTTGAAGGTTACAGATTATGGCTTCAATGAAATCCTCAACTGCCAAAACATCATCCTGGAGGACAACGCACCAGAGGATCAGTTCTGGACAGCTCCGGAGATCCTGAGGAATCCTGATCTGAAGAAGAAGGGAACATATCCAGGAGATGTATACAGCTTTTCTATCATCATGCAGGAGGTGATCTCTCGCTGCGCACCCTTCTGCATGTTGGATATGCCTCCTGAAGAAATCATAGAAAAGGTGCGCTCTCCTCCACCACTGTGCCGACCCACTGTGTCTATGGATGAAGCTCCGCTAGATGTGATTCAGCTCATGAAGCAGGCCTGGAGTGAGGAGCCTGAACAGAGGCCTACGTTTGAGGATATATTCAGACAGTTTAAGAGCATGAACAAAGGAAAGAAGACTAACATAATAGACTCAATGTTGAGGATGCTGGAGCAGTACTCCTCAAACCTGGAGGATCTGATCCGAGAGAGGACCGAAGAACTGGAGGTAGAGCGACAGAAAACTGATGCTCTTCTAGCCCAGATGCTGCCCAAGTCGGTGGCCTTGGCATTAAAAACAGGGAAGCCAGTGAAGCCAGAGCATTTCGCTGAAGTCACACTGTATTTCAGTGATATCGTGGGTTTCACCACCATCTCTGCCCTCAGTGAACCCATCGAAGTGGTCGATCTGCTTAATGACCTCTACACACACTTTGATGGAATCATCGCTATCCACGATGTCTATAAGGTGGAGACTATTGGTGATGCGTACATGGTGGCATCAGGAGTTCCCAATCGCAATGGTACCCGCCACGCTGCAGAGATGGCCAACATGTCCCTGGACATTCTCCACTGCATCGGTACATTTAAAATGAGGCACATGCCTGACGTCAAAGTCAAAATTCGCATTGGACTACATTCTGGTCCAGTGGTCGCAGGTGTAGTTGGCTTAAAGATGCCTCGATACTGTCTGTTCGGGGACACAGTAAACACAGCCTCCCGAATGGAATCCACAGGGTTGCCTTACAGAATTCATGTCAACCAGAGTACAGTTGATGTCCTAAACAGTCTCAAACTTGGCTACAAAATAGATACTCGGGGCAGGACCGAGCTCAAgGGTAAAGGTGTAGAAGAAACATTTTGGTTGGTTGGGAGGGATGGATTTGACAAGCCGTTACCTATACCGCCAGACCTTACTCCTGGGGCGAGCAACCATGGTATCAGCTTGGATGAGATCCCGACTGATAGGCGACAGAAATTCTTGGATCGACAGAAGAGGATGGGCAATTGAGGTTGTGATGCTCATGTTTCTGCACCAGCCTATCGAGTTAGGAGAAAGTGGGGCAAGGGGATGAAAAGGGTGAATTGAGGTGTTCAAAAACCCCTCGGCTACCCTTTTTCTACTTAAATACATTCCCGAAAAAGAATGGAAAGCCCCACTAGGACATCTGACAAGAACACAAACATATGAACTCTGAACGCCAGCCTGTCAAACCCACCGGCTCAACAAGACGCCATGTACCAACTGCTATGGATGGATACAGAGGACTCTTTGACATTTGTAAAGAGTTTATAATGCAGGTTTATTCCACTAAATTAAAGACACTGCTGAGATAATCGCTCAtcgagagagagaatgagaacaGCAGCACACGGCTGATTCATCTCTGCAGTTCTACGAAGATATGTTTTCTAAATTACTttgttgtttataaaacaaaagaa
>TCONS_00060713
TGCCACCTGTTCTCTCTTCGTCTCTGAtattcaacaataaaacaaagataaaatgaatgacCACACAAGCTTTCTCTGCCAGTCCCACCACCCTCGATGGCAAACACAGTCTTCTGCTGGAAAGAGACGACGGAAACAATCCTCATCGCAAAAATCTGAAACCCCAGCGAGCCCAGTGTCCTCGTCCCCAGTGCTACGCAGCCACAGCTGGTGGGGAAACTGCTTTCTCCTTCCTCTAGTCATGCTTTCATACTTTCCCTGTGAAGCCTGGGGCACCACCTTCAAAATTGCCATTGTAGGACCGTGGGCATGTGACCCCATGTACTCTAAAGCCCTGCCAGATCTGGCTGCCCGATTAGCCATGAGCCGCATCAACAAAGACCCCGAACTCAATAAAGGCTACTGGTATGATTACACAGTCATTAACGAGGATTGCTCCAGCTCCAGAGGCCTGGCACGCTTTGCCGAGCTGGAGGGTTACGGTTCGGCTTTTCTAGGACCGGCAAACCCTGGCTACTGCACGGCTGCCACACTGCTGGCAAAGAACTGGAACAAAGGCATCCTATCCTGGGGTTGCCTGAAGGCTGAGATGGATGAAGAGATGTATCCCACCTTTCTGCGGCCGCTGCCGTTGTCCTCCCGGGTGCTTTTCTCTGTGCTGCGGTTCTTCCGTTGGGCACATGTTGGGATTGTAACTGCTGAGGGCGACATGTGGGAGGCAACTGGGCATGAGCTTGCAGCATCCCTGCGTGCTCTTGGCTTGCCCGTTGGTAAGGTTGTTACGATGGAACAGGACAAAGAGGGGCCACGGCAAGCCCTACAGGCAATACGGGACACAGATCGAGTAAGGGTTGTCATCATGTGCATGCACTCTgccctgattggtggagaggaacaGTATCAGTTGCTGACTACAGCATTGGAAATGAGAATGATTGACCGAGGGTACATCTTCATTCCATACGACACCCTGCTCTATTCACTGccatatgaaaatgtaaaatatccAATCCTGGCCAATGACAGCAAACTGCGACGAGCATACGATGGGGTCTTAACAGTAACCATGGACCAAGGGGAACAAAACTTTTATGAGGCCTTTAATGCAGCACAGGAATCCTTTGAAATCCGCGGCAGCACATCAGCTGAAGAGGTTTCTCCATTTTTTGGGACCATATATAACATGATCTATTATACAGCCATGGCTGCAGAGCAAAGCCGAGCTTCGAGTGGTGGGCGATGGGTATCGGGCGATTTACTGTCTCAAAACGAGGGTGGATTTGAATTTGATGGCTTTAACCAGCGGATATCGGGAGGTACTAACGGAGAGGGAATGCAGGTCCGCTATGCTGTCCTGGATTCAGACGGCTCTGGGTCCAGCCTGTATCGCACACACGCCCTGGAAGCTTCACACACATATGGAAAATATGGAGGGTTAAAATACTTGGGGAAGTCAATTCATTTTGCTGGAGCGTCTCCGAGCAGTGACGCGAACTGCTGGTTTAGTCCTTATATCGCATGTAGTGGAGGATTGGATGGAGTGACGCTTTTCTTCTTGCTCATGTTTTTCATAGTGTTGATAGCGGGTGCAGGCATCCTTTTTCTACAAGTTAGAAAATATGGGGCTGGAGGTTTTTTTGGTGCGTTTATTGGAGGAGGAGGAAGCCCCACTAAGATAGTGCTGACGCTGGATGACTTGGTCTTCATCAACACCACACTCAGCAGAAGGAAACTGAATGACGAGAGTATGCTGAAGAGTCAGCTAGATGTTAAAACCCCGCGCCACTCAGTCTCTGGTCGCAGTTACATCACATCAACCCCAGAAACATCCAATGTTGCTGTATTTGAGGGTGACTGGGTCTGGTTAAAGAAATGCCCCTGTGCAGATTCTATTACAGAGATCAGTGAAAGCACACAGACCATCTTTGTCAAGCTGAGAGATATGCGTCATGAGAATCTGAACTTGTTCCTGGGTCTGTTTATGGATACTGGTATATTCGGCATTGTTACAGAGCACTGCACCAGAGGCAGTCTGGAAGACCTGCTCAACAATGAGGAAATGAGGCTTGACTGGATGTTCAAATCCTCTCTTCTCCTCGACCTGATTAGGGGAATGAAGTACTTGCATAATCGGGGCATTATTCATGGACGCCTGAAGTCTCGGAACTGTGTGGTGGATGGTCGATTTGTTTTGAAGGTTACAGATTATGGCTTCAATGAAATCCTCAACTGCCAAAACATCATCCTGGAGGACAACGCACCAGAGGATCAGTTCTGGACAGCTCCGGAGATCCTGAGGAATCCTGATCTGAAGAAGAAGGGAACATATCCAGGAGATGTATACAGCTTTTCTATCATCATGCAGGAGGTGATCTCTCGCTGCGCACCCTTCTGCATGTTGGATATGCCTCCTGAAGAAATCATAGAAAAGGTGCGCTCTCCTCCACCACTGTGCCGACCCACTGTGTCTATGGATGAAGCTCCGCTAGATGTGATTCAGCTCATGAAGCAGGCCTGGAGTGAGGAGCCTGAACAGAGGCCTACGTTTGAGGATATATTCAGACAGTTTAAGAGCATGAACAAAGGAAAGAAGACTAACATAATAGACTCAATGTTGAGGATGCTGGAGCAGTACTCCTCAAACCTGGAGGATCTGATCCGAGAGAGGACCGAAGAACTGGAGGTAGAGCGACAGAAAACTGATGCTCTTCTAGCCCAGATGCTGCCCAAGTCGGTGGCCTTGGCATTAAAAACAGGGAAGCCAGTGAAGCCAGAGCATTTCGCTGAAGTCACACTGTATTTCAGTGATATCGTGGGTTTCACCACCATCTCTGCCCTCAGTGAACCCATCGAAGTGGTCGATCTGCTTAATGACCTCTACACACACTTTGATGGAATCATCGCTATCCACGATGTCTATAAGGTGGAGACTATTGGTGATGCGTACATGGTGGCATCAGGAGTTCCCAATCGCAATGGTACCCGCCACGCTGCAGAGATGGCCAACATGTCCCTGGACATTCTCCACTGCATCGGTACATTTAAAATGAGGCACATGCCTGACGTCAAAGTCAAAATTCGCATTGGACTACATTCTGGTCCAGTGGTCGCAGGTGTAGTTGGCTTAAAGATGCCTCGATACTGTCTGTTCGGGGACACAGTAAACACAGCCTCCCGAATGGAATCCACAGGGTTGCCTTACAGAATTCATGTCAACCAGAGTACAGTTGATGTCCTAAACAGTCTCAAACTTGGCTACAAAATAGATACTCGGGGCAGGACCGAGCTCAAgGGTAAAGGTGTAGAAGAAACATTTTGGTTGGTTGGGAGGGATGGATTTGACAAGCCGTTACCTATACCGCCAGACCTTACTCCTGGGGCGAGCAACCATGGTATCAGCTTGGATGAGATCCCGACTGATAGGCGACAGAAATTCTTGGATCGACAGAAGAGGATGGGCAATTGAGGTTGTGATGCTCATGTTTCTGCACCAGCCTATCGAGTTAGGAGAAAGTGGGGCAAGGGGATGAAAAGGGTGAATTGAGGTGTTCAAAAACCCCTCGGCTACCCTTTTTCTACTTAAATACATTCCCGAAAAAGAATGGAAAGCCCCACTAGGACATCTGACAAGAACACAAACATATGAACTCTGAACGCCAGCCTGTCAAACCCACCGGCTCAACAAGACGCCATGTACCAACTGCTATGGATGGATACAGAGGACTCTTTGACATTTGTAAAGAGTTTATAATGCAGGTTTATTCCACTAAATTAAAGACACTGCTGAGATAATCGCTCAtcgagagagagaatgagaacaGCAGCACACGGCTGATTCATCTCTGCAGTTCTACGAAGATATGTTTTCTAAATTACTttgttgtttataaaa

Function

symbol description
gucy2d Predicted to enable guanylate cyclase activity and peptide receptor activity. Predicted to be involved in cGMP biosynthetic process and receptor guanylyl cyclase signaling pathway. Predicted to act upstream of or within several processes, including cyclic nucleotide biosynthetic process; protein phosphorylation; and visual perception. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in head. Human ortholog(s) of this gene implicated in Leber congenital amaurosis 1; choroidal sclerosis; cone-rod dystrophy 6; congenital stationary night blindness; and retinitis pigmentosa. Orthologous to human GUCY2D (guanylate cyclase 2D, retinal).

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0006468 protein phosphorylation biological_process
GO:0006182 cGMP biosynthetic process biological_process
GO:0009190 cyclic nucleotide biosynthetic process biological_process
GO:0007165 signal transduction biological_process
GO:0007168 receptor guanylyl cyclase signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0016829 lyase activity molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0016849 phosphorus-oxygen lyase activity molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004383 guanylate cyclase activity molecular_function
GO:0001653 peptide receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-011128-9 Predicted to enable guanylate cyclase activity and peptide receptor activity. Predicted to be involved in cGMP biosynthetic process and receptor guanylyl cyclase signaling pathway. Predicted to act upstream of or within several processes, including cyclic nucleotide biosynthetic process; protein phosphorylation; and visual perception. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in head. Human ortholog(s) of this gene implicated in Leber congenital amaurosis 1; choroidal sclerosis; cone-rod dystrophy 6; congenital stationary night blindness; and retinitis pigmentosa. Orthologous to human GUCY2D (guanylate cyclase 2D, retinal).

Ensembl:

ensembl_id ENSDARG00000026820

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060712 False 4522 mRNA 0.48 20 38123633 38161033
TCONS_00060713 True 3892 mRNA 0.48 19 38123641 38155005

Neighbor

gene id symbol gene type direction distance location
XLOC_031263 si:ch211-284e13.6 coding downstream 1507 38110384 ~ 38122126 (-)
XLOC_031262 si:ch211-284e13.14 coding downstream 15892 38104901 ~ 38107741 (-)
XLOC_031261 si:ch211-284e13.4 coding downstream 29503 38088594 ~ 38094130 (-)
XLOC_031260 si:dkey-111e8.5 coding downstream 59568 38060959 ~ 38064065 (-)
XLOC_031259 BX640520.1 coding downstream 85416 38035337 ~ 38038217 (-)
XLOC_031265 si:ch211-284e13.12 coding upstream 6777 38167810 ~ 38170996 (-)
XLOC_031266 si:ch211-284e13.11 coding upstream 15007 38176040 ~ 38179220 (-)
XLOC_031267 si:ch211-284e13.9 coding upstream 32420 38193453 ~ 38197080 (-)
XLOC_031268 slc12a9 coding upstream 54891 38215924 ~ 38248462 (-)
XLOC_031269 NA coding upstream 89011 38250044 ~ 38255744 (-)
XLOC_031251 NA non-coding downstream 411783 37708702 ~ 37711850 (-)
XLOC_031250 NA non-coding downstream 519898 37592276 ~ 37603735 (-)
XLOC_031249 NA non-coding downstream 640613 37480447 ~ 37483020 (-)
XLOC_031247 NA non-coding downstream 851322 37266944 ~ 37272311 (-)
XLOC_031276 NA non-coding upstream 453835 38614868 ~ 38633719 (-)
XLOC_031277 NA non-coding upstream 459924 38620957 ~ 38622971 (-)
XLOC_031280 BX640512.1 non-coding upstream 536463 38697496 ~ 38705831 (-)
XLOC_031284 NA non-coding upstream 629699 38790732 ~ 38791845 (-)

Expression


Co-expression Network