XLOC_031268 (slc12a9)


Basic Information

Item Value
gene id XLOC_031268
gene name slc12a9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 38215924 ~ 38248462 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060717
GAGGTGGTACAGGCTCTGAGAGGCCTGACACAGGAGCGCGTTTCACCATCCGTCATCATGATGATGATGTCCCGGAGGTTTGACGGTCACGAGATCTGAGGCTGCGGAAGAAACTTTCTACACGCGAGTCTTTGGACAAACGAAAGCTGCTCGGCGTGATGCTCTTATCGAACAGATAGGAGTCAGGACATCCCGGGTCCACATTATCAAAACGAGTATTTTGGTTTCCGTTGTTTTGTGCAGCTTCTTGAAAGCGGAAGTAAAACACCGCTTTTTTGGATTTGTCTTGGCGCTGTTATACGGACAGATCATGGCAAATGAGCACTCGCCTCTTCTGGTTCATGGGGTTTACAGCATGATGGGAAATGCTGAAGACTCCAGGGGTGGATCAGCAGGAACAGGAGAGGCGTCAAACCCCAAAACAGACCCCCGAAAACTCAACACCTTCTTTGGCGTCATGGTGCCCACCATTCTCTCCATGTTCAGCATTGTGCTCTTTCTTCGTACAGGTTTTGTTGTGGGACATGCTGGTCTTCTGCATGGTCTCCTCATGCTGTTTGTGGCTTACTTCATCATCTCATTGACAATCCTGTCTATATGTGCCATTTCAACTAATGGGGCTGTGGAAGGAGGTGGAGCTTATTTCATGATCAGTCGTTCTCTGGGTCCAGAGTTTGGCGGGAGCATCGGCCTGATGTTTTACCTTGCgaaggtgtgtgcgtgtggtGTGTATGTTCTCGGGCTGGTGGAGGCCATAATGGACGTCTTCGGTCAGGATCCAGGCTCTTCTGTGGCACAGGGGCTGCGTGTGTTGCCGCAGGGCTACTGGTACACCGTGTTGTACTCCTCTGTAGTGTTGTTGCTGTGTATGCTGGTGTGTCTGGTCGGTGCTCACATCTACGCCAAAGCCTCTTTTCTCATTCTGCTGGTGGTGACGGTGTCTCTGATCTCCATTATCATCAGCCCACTGATAGTCAGTCCACAGGGCTTTAACATCACGCACACGTACGGCAACAACCACAGTGTTACGGTCAGTCCAAGCTACACGGGCTTTAACAGCACCACTCTGAAGAACAACCTTGGACCTCGCTACTCTTTGGACTACAGTACCAACACAATGATGTCTTTCGCCACTGTGTTTGCTGTGATGTTCACCAGCTGCACAGGCATCATGGCAGGAGCCAACATGTCGGGTGAGCTCAAGAATCCCAGTGAATCAATACCTAAAGGGACCATTATGGCGGTGGCGTACACCTTCACTGTCTATGTGCTTCTCTATCTCCTGCTGAGCTCTACCTGTGACAGGTCGTTGTTACTCAATGATTACGCAGTGTTTCAGAGAGTGAACGTGTGGCCTCCATTCGTGACCATCGGCGTTTACTGCGCTTCTCTCTCAGCTGCCATGTGCTCTATGATAGGAGCCTCTCGAATCCTCCATGCTCTTGCCCTGGACCAACTCTTTGGTCTTCCTTTGGCTCCAGCTGCTGTCACCTCCAGTTCGGGGAACCCATGGGTCTCTGTGCTCTACACCTGGGCTCTGGTGCAGtgtACGCTGTTTGCAGGGCAGCTGAATGTGATTGCTGGTATTGTGACAGTGTTTTATCTGTTGGCGTATGCTGCGGTTGATTTGGCCTGTCTTGCTCTGGAATGGGCATCTGCTCCAAACTTCAGGCCGACGTTCCAGTTTTTCTCCTGGCACACGTGTCTGTTGGGTATCATCAGCTGTGTGGTGATGATGTTCGTGATTAACCCTGTGTATTCCTCAGCCAGTATTGTGCTGCTGCTGCTCCTGCTGCTCTTCCTGCATTACCGATCTCCCACCAGCAGCTGGGGCTACATCAGCCAAGCCCTCATCTTCcatcagGTGAGGAAGTACCTTCTGATGTTGGACTCTCGGAAGGATCATGTGAAGTTCTGGCGGCCGCAGGTGTTACTGATGGTGTCCAACCCACGCTCCTCCTGTCAGCTCATCTGCTTTGTCAACCAGCTGAAGAAAGGGGGCCTGTTTGTCCTTGGACACGTGCAGATTGGAGATCTGGATGTGCTGCCAGCAGACCCGGTGCAGCCGCAGTATAATTTCTGGTTGAGTCTGGTGGATAAGCTGGGTGTGAAGGCCTTTGTGGATCTGACTCTTTCTCCCTCGGTCAGGCAGGGCACTCAACATCTGCTCCGCATCACTGGACTTGGAGGAATGAAGCCTAATACCCTGGTGTTGGGCTTTTATGACAACTCCTATCCAGAGGACTACTTCCTCCAGGACCCTGTCTTTTGCAAGGGCGACAGATCTGAAGGGGATAATTTCGGTGTGGACCTCCCATCCCTCCAGGCTCATTTTCCACCGGTGCGCCATGCCGAGAGCCCTCGCGCACTGCAGCCTCAGGAGTACGTCAGCATCATTCAGGATGCCATCAAAATGGGCAAGAACATTTGCTTGGCGCGCTACTTCTTCCAGCTGCCGCCCGAGAGCAAAGGTGCAACGTACATGTGGGGAAAAGACAGCATGGACACCATCGACGTGTGGCCGACAAACCTCTTGACTCCAGGTAGTGCCAGTTACGCTGACGTGGGCAGTCTGTTCCTGCTTCAGATGGCGTGTGTGTTGAACATGGCCAGCGGGTGGCGCCGTGCGAGATTGCGTATATTCGTGTGTGTGGAGTCTGAATCGGAAGATCAGGGCTGGCTGGCCAAAGAGGAGCAGTTTAGAGAGTTGCTGGGAAAGCTGAGGATTCGTGCTGCTATTAAGATCGTGGCGTGGGATAATGTCGCACGCATGGTTAGAGGGCCAAACACAGAGAGCCAACCGGTGTCAGAAGACTTCCTCTGTGCTGTGAATGGCCTTCTGAAGGAGCACAGCTCGACTGCCGCCGTGCGCTTTCTGTATTTGCCCGATCCCCCATCTAGTTGTGAGCTGTCCCAACAGTACCTCACCCAGCTAGACACACTGACCCGGGATCTGGGCCCGACGCTCTTGATTCATGGGGTTACCCCAGTCACGTGCACTGAGCTCTGAGAAaccaaaatgtgtttgtgtgataGAGAGGAACATCATGTTAGTGAGCAGAAGTGTGTTTGAGTCCTCACGCTCTTAAACACCACATCATGTATGGGTGGATGACTCCTTCAATGTGTTTTGGGATTTCTAGGTAAACGCTGCCTGATCTTGTGCGCCGCTATGTTGGTGTTGTTCTCTACGCATCATCGTTTGTCGTCTGAAAGAGCGGGTTTAGTGTTCTTGGAAAAGGAAGTGACTGCATTAAATTGGAGTTGCTGTTAATGTTCATTCATGTGTCACGCtgtaaagctttaaataggatcttgtgatgggtttgttttgtatGGGTGAAATGCAGTTTGTTGACTGTGTAGGGTGGAAAGAGTATCCTTGAATGAGATGTCCATGGTTATATTTGGCACCGTAATATGGGGCGAAGTGACTCACTTTTTGTTATTGTGCTTCGTTAATCATTTCTGCTTTTTTCTTGGCATAAACCAGACTTTGAACTCATTTTGTCCCAATTATAGTTTGTGAAGCTGTGAGGAGCCCTCACGGGTTTGGGTCATTGTTCGTTTCTTGGCGAAAAATCCGCTGTCCACTTTCTGATTGGAGTATGGATGTATTTACGGTCACTCGAGTAGTTCTATATAGACATGTTATTTATAATTGTGACATTTTGTGAATGTGTTTTCGTTTGTGTTTCAGATTGTGGGCCATTTGCTGCTTACGCGTCCTATTCGTTTGTATGTTTGTTGTCAATTTTACAGTTCAAGTGTATTTATAATTGTGTTAACCAACTAGAGGCGGAGCTCATCAGTGTCATCTGAATGGTCAAGACTGATGATGATGTTTGTGTTAAGTCTTTGGGAACTGAAAAGGGACACTTTTCTTAAATAATACTTGAATATTTTGCACCTCTGTGCGTGTGTTCTGTCGTTAGCATTAACAATGCTGATATCCAAGAACGATAGTTGGACCTTTATGATGGCTGTACAATAATAGAAGTACTATGCTAAATTAGCAATGTGTGAAATTCTGTACATTTATCATCATAGAAAAAGAGGTTTGTTCAACATCGCTTTGAGGATGCACAAATTGCGTTACACAATCCAGATTTCATGTATTCCAAAGAAGATTAGAAATCATTTAGGCGCATAATAACCATTAATGTACTTTTTAAAGTATGTGCGCACATGTACATGTTACTGTTAAATACAGAAAAGGATGGTACACAGGCATGATCTCAGAACTGGTGTTTCCTGAATGAAGAGTCTGTAAACGGAAGCCTAAGATTAAACAAAATATGTCAGTCATCTTTTTCCGtaattcactttttttattgCTGAAATTCTGATTTTGTTCAGTCTAAAGTGTGTTCAAGTCATCttatataaaagtaataaatacatCATGTAAGCAACAGTCATAACCTTTAGTGTAAAcacattgttttttaataaattggttaATT
>TCONS_00060718
CCTGACACAGGAGCGCGTTTCACCATCCGTCATCATGATGATGATGTCCCGGAGGTTTGACGGTCACGAGATCTGAGGCTGCGGAAGAAACTTTCTACACGCGAGTCTTTGGACAAACGAAAGCTGCTCGGCGTGATGCTCTTATCGAACAGATAGGAGTCAGGACATCCCGGGTCCACATTATCAAAACGAGTATTTTGGTTTCCGTTGTTTTGTGCAGCTTCTTGAAAGCGGAAGTAAAACACCGCTTTTTTGGATTTGTCTTGGCGCTGTTATACGGACAGATCATGGCAAATGAGCACTCGCCTCTTCTGGTTCATGGGGTTTACAGCATGATGGGAAATGCTGAAGACTCCAGGGGTGGATCAGCAGGAACAGGAGAGGCGTCAAACCCCAAAACAGACCCCCGAAAACTCAACACCTTCTTTGGCGTCATGGTGCCCACCATTCTCTCCATGTTCAGCATTGTGCTCTTTCTTCGTACAGGTTTTGTTGTGGGACATGCTGGTCTTCTGCATGGTCTCCTCATGCTGTTTGTGGCTTACTTCATCATCTCATTGACAATCCTGTCTATATGTGCCATTTCAACTAATGGGGCTGTGGAAGGAGGTGGAGCTTATTTCATGATCAGTCGTTCTCTGGGTCCAGAGTTTGGCGGGAGCATCGGCCTGATGTTTTACCTTGCgaaggtgtgtgcgtgtggtGTGTATGTTCTCGGGCTGGTGGAGGCCATAATGGACGTCTTCGGTCAGGATCCAGGCTCTTCTGTGGCACAGGGGCTGCGTGTGTTGCCGCAGGGCTACTGGTACACCGTGTTGTACTCCTCTGTAGTGTTGTTGCTGTGTATGCTGGTGTGTCTGGTCGGTGCTCACATCTACGCCAAAGCCTCTTTTCTCATTCTGCTGGTGGTGACGGTGTCTCTGATCTCCATTATCATCAGCCCACTGATAGTCAGTCCACAGGGCTTTAACATCACGCACACGTACGGCAACAACCACAGTGTTACGGTCAGTCCAAGCTACACGGGCTTTAACAGCACCACTCTGAAGAACAACCTTGGACCTCGCTACTCTTTGGACTACAGTACCAACACAATGATGTCTTTCGCCACTGTGTTTGCTGTGATGTTCACCAGCTGCACAGGCATCATGGCAGGAGCCAACATGTCGGGTGAGCTCAAGAATCCCAGTGAATCAATACCTAAAGGGACCATTATGGCGGTGGCGTACACCTTCACTGTCTATGTGCTTCTCTATCTCCTGCTGAGCTCTACCTGTGACAGGTCGTTGTTACTCAATGATTACGCAGTGTTTCAGAGAGTGAACGTGTGGCCTCCATTCGTGACCATCGGCGTTTACTGCGCTTCTCTCTCAGCTGCCATGTGCTCTATGATAGGAGCCTCTCGAATCCTCCATGCTCTTGCCCTGGACCAACTCTTTGGTCTTCCTTTGGCTCCAGCTGCTGTCACCTCCAGTTCGGGGAACCCATGGGTCTCTGTGCTCTACACCTGGGCTCTGGTGCAGtgtACGCTGTTTGCAGGGCAGCTGAATGTGATTGCTGGTATTGTGACAGTGTTTTATCTGTTGGCGTATGCTGCGGTTGATTTGGCCTGTCTTGCTCTGGAATGGGCATCTGCTCCAAACTTCAGGCCGACGTTCCAGTTTTTCTCCTGGCACACGTGTCTGTTGGGTATCATCAGCTGTGTGGTGATGATGTTCGTGATTAACCCTGTGTATTCCTCAGCCAGTATTGTGCTGCTGCTGCTCCTGCTGCTCTTCCTGCATTACCGATCTCCCACCAGCAGCTGGGGCTACATCAGCCAAGCCCTCATCTTCcatcagGTGAGGAAGTACCTTCTGATGTTGGACTCTCGGAAGGATCATGTGAAGTTCTGGCGGCCGCAGGTGTTACTGATGGTGTCCAACCCACGCTCCTCCTGTCAGCTCATCTGCTTTGTCAACCAGCTGAAGAAAGGGGGCCTGTTTGTCCTTGGACACGTGCAGATTGGAGATCTGGATGTGCTGCCAGCAGACCCGGTGCAGCCGCAGTATAATTTCTGGTTGAGTCTGGTGGATAAGCTGGGTGTGAAGGCCTTTGTGGATCTGACTCTTTCTCCCTCGGTCAGGCAGGGCACTCAACATCTGCTCCGCATCACTGGACTTGGAGGAATGAAGCCTAATACCCTGGTGTTGGGCTTTTATGACAACTCCTATCCAGAGGACTACTTCCTCCAGGACCCTGTCTTTTGCAAGGGCGACAGATCTGAAGGGGATAATTTCGGTGTGGACCTCCCATCCCTCCAGGCTCATTTTCCACCGGTGCGCCATGCCGAGAGCCCTCGCGCACTGCAGCCTCAGGAGTACGTCAGCATCATTCAGGATGCCATCAAAATGGGCAAGAACATTTGCTTGGCGCGCTACTTCTTCCAGCTGCCGCCCGAGAGCAAAGGTGCAACGTACATGTGGGGAAAAGACAGCATGGACACCATCGACGTGTGGCCGACAAACCTCTTGACTCCAGGTAGTGCCAGTTACGCTGACGTGGGCAGTCTGTTCCTGCTTCAGATGGCGTGTGTGTTGAACATGGCCAGCGGGTGGCGCCGTGCGAGATTGCGTATATTCGTGTGTGTGGAGTCTGAATCGGAAGATCAGGGCTGGCTGGCCAAAGAGGAGCAGTTTAGAGAGTTGCTGGGAAAGCTGAGGATTCGTGCTGCTATTAAGATCGTGGCGTGGGATAATGTCGCACGCATGGTTAGAGGGCCAAACACAGAGAGCCAACCGGTGTCAGAAGACTTCCTCTGTGCTGTGAATGGCCTTCTGAAGGAGCACAGCTCGACTGCCGCCGTGCGCTTTCTGTATTTGCCCGATCCCCCATCTAGTTGTGAGCTGTCCCAACAGTACCTCACCCAGCTAGACACACTGACCCGGGATCTGGGCCCGACGCTCTTGATTCATGGGGTTACCCCAGTCACGTGCACTGAGCTCTGA

Function

symbol description
slc12a9 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within ion transport and transmembrane transport. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human SLC12A9 (solute carrier family 12 member 9).

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0006811 ion transport biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG:

id description
ko02000 Transporters

ZFIN:

id description
ZDB-GENE-050208-222 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within ion transport and transmembrane transport. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human SLC12A9 (solute carrier family 12 member 9).

Ensembl:

ensembl_id ENSDARG00000060366

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060717 False 4466 mRNA 0.48 15 38215924 38248462
TCONS_00060718 True 2987 mRNA 0.53 14 38217380 38248347

Neighbor

gene id symbol gene type direction distance location
XLOC_031267 si:ch211-284e13.9 coding downstream 18844 38193453 ~ 38197080 (-)
XLOC_031266 si:ch211-284e13.11 coding downstream 36704 38176040 ~ 38179220 (-)
XLOC_031265 si:ch211-284e13.12 coding downstream 44928 38167810 ~ 38170996 (-)
XLOC_031264 gucy2d coding downstream 54891 38123633 ~ 38161033 (-)
XLOC_031263 si:ch211-284e13.6 coding downstream 93798 38110384 ~ 38122126 (-)
XLOC_031269 NA coding upstream 1582 38250044 ~ 38255744 (-)
XLOC_031270 mink1 coding upstream 53444 38301906 ~ 38384755 (-)
XLOC_031271 pld2 coding upstream 139981 38388443 ~ 38438613 (-)
XLOC_031272 chrne coding upstream 191637 38440099 ~ 38451082 (-)
XLOC_031273 atp1b2b coding upstream 227069 38475531 ~ 38506981 (-)
XLOC_031259 BX640520.1 non-coding downstream 177707 38035337 ~ 38038217 (-)
XLOC_031251 NA non-coding downstream 504074 37708702 ~ 37711850 (-)
XLOC_031250 NA non-coding downstream 612189 37592276 ~ 37603735 (-)
XLOC_031249 NA non-coding downstream 732904 37480447 ~ 37483020 (-)
XLOC_031247 NA non-coding downstream 943613 37266944 ~ 37272311 (-)
XLOC_031276 NA non-coding upstream 366406 38614868 ~ 38633719 (-)
XLOC_031277 NA non-coding upstream 372495 38620957 ~ 38622971 (-)
XLOC_031280 BX640512.1 non-coding upstream 449034 38697496 ~ 38705831 (-)
XLOC_031284 NA non-coding upstream 542270 38790732 ~ 38791845 (-)

Expression


Co-expression Network