XLOC_031288


Basic Information

Item Value
gene id XLOC_031288
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 39042054 ~ 39045354 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062055
CAATACAAACACAGAGTATAATTGGAAATCATTTCCCATTCAAAACGGCCGAGGAGTGTTTCCCACTGAGAGAAGTGGTCATTGTGGGATAACTTGAATGCTTCGATACAGTGAAGGTGAAGTCATCGGAGTGAATCTCGTCTTCACTGGTGTGCACATACTGAATGCTGCGAGAGGCCAGGTCAGCCTGGGTAAACGAGCTGATCCGTGTTCCTGCAACAACATCACATATTGTGCAACTCTCCAGGTCAACTGAAATTGATGAATAAAACATGCGCTGCTCCGGAAATCCCATTGAGTGCAATCCATGAAACACCAAGAGGGACAGAGcggaaaataaaaactgctcttCGCCCATGAAACTACCTTATCTGACACCTTGATAGAGATCTATAGGCAGGTTCCCAACTAATGAGTTCTGCCATGAGTTCTGTAGGTCATGAACATTGCCTGGCAATTGTGGCCAGCTTTTATAAATGCACTAGGACCacaaactataaatatatattatgatcTTTAACGCTCTAGAGATTAAATCTTCAATAGAGAGCAGAATAGCAATGATGTTATGCTTGTGCATGTAGGTGTTTTCTTGTATATGACAGATTTGTGAGTCTTGGAATTATGGCTATATGTAATTTTGAGTGAAACTTCCCCAGTGACCCGGCAGCCCGACATTTACAGCACATCTACAGAAGTTGCCTTTAAATAATGATGTAAAGTCATCTGCCACCATTATAAATACCCCACAGATCAACTTAAATGGCTCTCTACACACTACAGACATGCTTTCAAAGCATTGTCTGCAGAGCTACAATGTCTCTGTATCCAAGTTACACTATAAAATATTAGCTGCAAATGAAAAGTACATAACGGCACTAAAACTACTTAAGGGGGCTacatcattttaaatgtgtaaccaGTGCATGCATACCTGAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062055 True 939 lncRNA 0.41 3 39042054 39045354

Neighbor

gene id symbol gene type direction distance location
XLOC_031287 BX571800.2 coding downstream 12129 39029811 ~ 39029925 (-)
XLOC_031286 BX571800.1 coding downstream 149295 38892622 ~ 38892759 (-)
XLOC_031283 cnot6l coding downstream 217588 38786481 ~ 38824466 (-)
XLOC_031285 BX640512.5 coding downstream 243736 38798204 ~ 38798318 (-)
XLOC_031284 NA coding downstream 250209 38790732 ~ 38791845 (-)
XLOC_031289 paqr3a coding upstream 109263 39154617 ~ 39171302 (-)
XLOC_031290 AL935062.1 coding upstream 279414 39324768 ~ 39324884 (-)
XLOC_031291 antxr2a coding upstream 340871 39386225 ~ 39474235 (-)
XLOC_031292 prkg2 coding upstream 634413 39679767 ~ 39702345 (-)
XLOC_031293 rasgef1ba coding upstream 660991 39706345 ~ 39805874 (-)
XLOC_031280 BX640512.1 non-coding downstream 336223 38697496 ~ 38705831 (-)
XLOC_031294 NA non-coding upstream 835304 39880658 ~ 39881073 (-)
XLOC_031299 NA non-coding upstream 1182934 40228288 ~ 40230908 (-)
XLOC_031304 NA non-coding upstream 1511878 40557232 ~ 40713992 (-)
XLOC_031306 NA non-coding upstream 1765434 40810788 ~ 40829833 (-)

Expression


Co-expression Network