XLOC_031299



Basic Information


Item Value
gene id XLOC_031299
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 40228288 ~ 40230908 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00062058
GGATGTCAAGACCTTTCGCTAGGGTGGAGACATCAGTGGGTGGCAACTGAGTGACAGAGTCACTGGAAAGGGTTATTGGGCTTACTGTTGTACTTATATCCAGCTCCTTTTCAGGTTCACAACCAACAGAGATGTCTTTGGTTACTACCGCACTGGGAAGACCCATTTtgacataatttattttaatatctctgAAACATCCTTTAAAAGAACCTCCTCTAACACGTTTCCCTGCTACTGAAGCAAGGCCTACCTTTCTAACCTCAGAACGCGTGCTGTCATCGATTCCCCCAACAAAGAGGAAACCTTTCAGATGAAAGGTTTTTGATCTGGAGCTAATGGTGGACTTTACAGACTCTCCATCAACTGTGAGTTGGAGGCTTTTGGGGGTAAAAAAGAGCTTGACATTG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00062058 True 410 lncRNA 0.44 2 40228288 40230908

Neighbor


gene id symbol gene type direction distance location
XLOC_031298 si:dkey-193c22.1 coding downstream 17841 40200818 ~ 40210447 (-)
XLOC_031297 wdfy3 coding downstream 37339 40052930 ~ 40190949 (-)
XLOC_031296 cds1 coding downstream 187800 40009958 ~ 40040488 (-)
XLOC_031295 pimr200 coding downstream 241096 39981479 ~ 39987192 (-)
XLOC_031294 NA coding downstream 347215 39880658 ~ 39881073 (-)
XLOC_031300 snx18a coding upstream 41940 40272848 ~ 40292299 (-)
XLOC_031301 hspb3 coding upstream 65643 40296551 ~ 40297003 (-)
XLOC_031302 BX571674.1 coding upstream 105920 40336828 ~ 40388543 (-)
XLOC_031303 fsta coding upstream 274002 40504910 ~ 40510399 (-)
XLOC_031304 NA coding upstream 326324 40557232 ~ 40713992 (-)
XLOC_031290 AL935062.1 non-coding downstream 903404 39324768 ~ 39324884 (-)
XLOC_031288 NA non-coding downstream 1182934 39042054 ~ 39045354 (-)
XLOC_031287 BX571800.2 non-coding downstream 1198363 39029811 ~ 39029925 (-)
XLOC_031286 BX571800.1 non-coding downstream 1335529 38892622 ~ 38892759 (-)
XLOC_031306 NA non-coding upstream 579880 40810788 ~ 40829833 (-)
XLOC_031309 BX470118.1 non-coding upstream 773240 41004148 ~ 41004262 (-)
XLOC_031312 CR753861.2 non-coding upstream 952228 41183136 ~ 41183252 (-)
XLOC_031314 NA non-coding upstream 1233185 41464093 ~ 41474260 (-)

Expression



Co-expression Network