XLOC_031882


Basic Information

Item Value
gene id XLOC_031882
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 10865768 ~ 10867454 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064606
CAGCAAAGCGCACTACGAGGACATCTGTCtggatttttgtctgttttatcaTTTGTTCAGTCCAGAATATTTGACTTTATCtttatatttaaacttttatcttaatatttcagttttattttgtattacccGATTGCTTTATTATgggttacatttattattataaatgtatttaaagtattttttttacatcaaatgcgAACAGAGATGCCGAGCGCCGCTCAATCCCGGGGGAAAAATCAACAGGACTAAAATGCATGCACTTCTCTAACAATGAGCTAAAATTGTCTTGTAAATGTTTCTGAATGTATATTGAGATCTAATAAAAAGACAGTGTACAAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064606 True 342 lncRNA 0.31 2 10865768 10867454

Neighbor

gene id symbol gene type direction distance location
XLOC_031881 BX936397.2 coding upstream 131806 10727344 ~ 10733962 (+)
XLOC_031880 NA coding upstream 143680 10720042 ~ 10722088 (+)
XLOC_031879 NA coding upstream 151891 10708691 ~ 10713877 (+)
XLOC_031878 BX936397.1 coding upstream 172345 10691940 ~ 10693423 (+)
XLOC_031876 kcnh7 coding upstream 289111 10450000 ~ 10576657 (+)
XLOC_031884 mtx2 coding downstream 4205 10871659 ~ 10879963 (+)
XLOC_031885 NA coding downstream 21607 10889061 ~ 10890224 (+)
XLOC_031886 si:dkey-3d18.5 coding downstream 36040 10903494 ~ 10904582 (+)
XLOC_031887 NA coding downstream 63436 10930890 ~ 10931090 (+)
XLOC_031888 NA coding downstream 121191 10988645 ~ 11008430 (+)
XLOC_031877 BX005368.1 non-coding upstream 329073 10536332 ~ 10536695 (+)
XLOC_031889 BX548046.3 non-coding downstream 150962 11018416 ~ 11018532 (+)
XLOC_031897 AL929243.2 non-coding downstream 907163 11774617 ~ 11774732 (+)

Expression


Co-expression Network