XLOC_031885



Basic Information


Item Value
gene id XLOC_031885
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 10889061 ~ 10890224 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00064818
TTTACATGtatttgttgcctcattacaaataAACACAggaaatatcacaatatttatttgttaaactgACAAAATATACCTCTAAACAGACGTTGTCTCTTTTGGAAGCACAGAATAAACTTATAATCTCACATTTTACATTCGGGAGAGCTGTGAACATTATGCGGTTGTCCTTGAATGCCTGCTTCACAAGACTGCTCCTTTTTACAATccctgtttttaaaataagagtcctcAATTCAATTAGACAGTAGCCTTAATGCATGATTGAAACCAGAAGCTAGAATGACGATGTCAGTCAAGTCAATAAAATCAACTAATCTGATCACAAGTGCTCATAGTATGTCATCAAGAGTTCATAAATAAGGCCCACAACATCTCAATAAACCACAGATAGAGTCGTTGAATTGTTATACAGCAACATTTAAATCCCCTGATGACATCTTGTTCTTGAGAGCTGTGTTACGAGGCAGCAGGTAAACCGTGCCGTCAGTGCTAAGCTGTAGTTTGTACTCTCTGGGATTGTAC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00064818 True 528 lncRNA 0.37 2 10889061 10890224

Neighbor


gene id symbol gene type direction distance location
XLOC_031884 mtx2 coding upstream 9098 10871659 ~ 10879963 (+)
XLOC_031882 NA coding upstream 21607 10865768 ~ 10867454 (+)
XLOC_031883 dre-mir-10d coding upstream 21920 10867024 ~ 10867141 (+)
XLOC_031881 BX936397.2 coding upstream 155099 10727344 ~ 10733962 (+)
XLOC_031880 NA coding upstream 166973 10720042 ~ 10722088 (+)
XLOC_031886 si:dkey-3d18.5 coding downstream 13270 10903494 ~ 10904582 (+)
XLOC_031887 NA coding downstream 40666 10930890 ~ 10931090 (+)
XLOC_031888 NA coding downstream 98421 10988645 ~ 11008430 (+)
XLOC_031889 BX548046.3 coding downstream 128192 11018416 ~ 11018532 (+)
XLOC_031890 abcc6a coding downstream 136130 11026354 ~ 11067995 (+)
XLOC_031879 NA non-coding upstream 175184 10708691 ~ 10713877 (+)
XLOC_031897 AL929243.2 non-coding downstream 884393 11774617 ~ 11774732 (+)
XLOC_031915 NA non-coding downstream 2369858 13260082 ~ 13267143 (+)

Expression



Co-expression Network