XLOC_031887


Basic Information

Item Value
gene id XLOC_031887
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 10930890 ~ 10931090 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064607
aaattatttggcggttcattccgctgtggcgaccccagattaataaaaggactaagccgaaaataaaataaatgaataaatatttgatttaaaaaaattatttattcattcattcagtcattttcattcggcttagtccttgattatcaggggtccccacagtggaatggaccaccaactattctggcatatgttatACAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064607 True 201 lncRNA 0.34 1 10930890 10931090

Neighbor

gene id symbol gene type direction distance location
XLOC_031886 si:dkey-3d18.5 coding upstream 26308 10903494 ~ 10904582 (+)
XLOC_031885 NA coding upstream 40666 10889061 ~ 10890224 (+)
XLOC_031884 mtx2 coding upstream 50927 10871659 ~ 10879963 (+)
XLOC_031882 NA coding upstream 63436 10865768 ~ 10867454 (+)
XLOC_031883 dre-mir-10d coding upstream 63749 10867024 ~ 10867141 (+)
XLOC_031888 NA coding downstream 57555 10988645 ~ 11008430 (+)
XLOC_031889 BX548046.3 coding downstream 87326 11018416 ~ 11018532 (+)
XLOC_031890 abcc6a coding downstream 95264 11026354 ~ 11067995 (+)
XLOC_031891 atg9a coding downstream 318616 11249706 ~ 11267002 (+)
XLOC_031892 zgc:112416 coding downstream 438045 11369135 ~ 11396429 (+)
XLOC_031881 BX936397.2 non-coding upstream 196928 10727344 ~ 10733962 (+)
XLOC_031880 NA non-coding upstream 208802 10720042 ~ 10722088 (+)
XLOC_031897 AL929243.2 non-coding downstream 843527 11774617 ~ 11774732 (+)
XLOC_031915 NA non-coding downstream 2328992 13260082 ~ 13267143 (+)
XLOC_031917 NA non-coding downstream 2413585 13344675 ~ 13348236 (+)

Expression


Co-expression Network