XLOC_031900 (si:dkey-276j7.2)


Basic Information

Item Value
gene id XLOC_031900
gene name si:dkey-276j7.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 12316438 ~ 12321901 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062462
CAGAGATGTCGACGACACACACACTGAAGATGAGCGCTTCTGTACAATACATCAGAAAACTACTGGGCAAAAGCAGCTGCGCCACAAACAACTTGCTAAACACTGGACACAAAATACAAAGGAAAACTAGTGACTGTAAAACTACCAAAAACAAAGACGGAAAAACCCTTACAAGAAAGGTTGTGCAAACTCAAGATAAGACAGCAGAGCAGTGCATAAGGAAAAGTGTGATATTACGAAGAACAGAAAATGAAACTTTTGGCTTTGAAATCCAGGATCTGGTcccttgtgtgtgttttgtgaaggAGGACAGTCTTGCGGAGAGCAGTGGGTTAATGACCGATGATGTTATTATCGCAGTCAACAGTGTGTCCATTGCTGAATTCACTCAACAGCAGCTCAAGGATCTGTTTCAGAAGGCATCCATCTTAATGCTGGAGATTGTCAGAAGCTCTACAGAAAAGCAGAGACAGTTGCTCATCAGACTTTATCTCCTTCAGCGAGAGTTTGCAGAGAAAAGCGCTGAGCTCCAGACACTCAACACAGAGGAAGTGCGTCTCATAGGAGATGCCATGAATCACATTCAGCAGCCTGATGTACTTTCTAAAGGATCTTCTGCTGCACTTTCTGAAAGAACAGATTGATTTAACacacatttgaacaaaaacaaataaaggttGTGGGCTTCACTTCAGATGATGCGCTGGTGGATTACAGTAGGACCGAGTATCTACTCTGTGGGCACCTGGACTTTAACACGGTGTTTGTGAATTCAAAAAACTACTC

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-131127-420 No description available

Ensembl:

ensembl_id ENSDARG00000097743

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062462 True 786 mRNA 0.43 8 12316438 12321901

Neighbor

gene id symbol gene type direction distance location
XLOC_031899 wdsub1 coding upstream 283734 12006557 ~ 12032704 (+)
XLOC_031898 baz2ba coding upstream 313503 11829867 ~ 12002935 (+)
XLOC_031897 AL929243.2 coding upstream 541706 11774617 ~ 11774732 (+)
XLOC_031896 zswim2 coding upstream 552100 11760749 ~ 11764338 (+)
XLOC_031895 calcrlb coding upstream 611758 11680726 ~ 11704680 (+)
XLOC_031901 si:dkey-276j7.3 coding downstream 4366 12326267 ~ 12332105 (+)
XLOC_031902 nr4a2b coding downstream 140178 12462079 ~ 12466550 (+)
XLOC_031903 stk24b coding downstream 160698 12482599 ~ 12551359 (+)
XLOC_031904 fam117ba coding downstream 531754 12853655 ~ 12865827 (+)
XLOC_031905 cxcr4a coding downstream 600101 12922002 ~ 12923727 (+)
XLOC_031889 BX548046.3 non-coding upstream 1297906 11018416 ~ 11018532 (+)
XLOC_031888 NA non-coding upstream 1308008 10988645 ~ 11008430 (+)
XLOC_031887 NA non-coding upstream 1385348 10930890 ~ 10931090 (+)
XLOC_031885 NA non-coding upstream 1426214 10889061 ~ 10890224 (+)
XLOC_031915 NA non-coding downstream 938181 13260082 ~ 13267143 (+)
XLOC_031917 NA non-coding downstream 1022774 13344675 ~ 13348236 (+)
XLOC_031925 dre-mir-153b non-coding downstream 1659044 13980945 ~ 13981092 (+)
XLOC_031933 NA non-coding downstream 2983864 15305765 ~ 15308585 (+)
XLOC_031935 CR956630.1 non-coding downstream 3222154 15544055 ~ 15544170 (+)

Expression


Co-expression Network