XLOC_031925 (dre-mir-153b)


Basic Information

Item Value
gene id XLOC_031925
gene name dre-mir-153b
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 13980945 ~ 13981092 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062509
GAGCGATGGAGCGCGGTAGCGAGGTATTGCACAGCTGTCTGTGTCATTTTTGTGGTTTGCAGCTAGTAGTCTGGTTCCAGTTGCATAGTCACAAAAATGAGCACAGACAGATGTGACTGCAGCAACGCTGATGAAACGCTCCATCGCC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000083395

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062509 True 148 miRNA 0.51 1 13980945 13981092

Neighbor

gene id symbol gene type direction distance location
XLOC_031923 dnpep coding upstream 60551 13896264 ~ 13920394 (+)
XLOC_031922 tmem198b coding upstream 110787 13779857 ~ 13870158 (+)
XLOC_031921 cdk5r2a coding upstream 236264 13742899 ~ 13744681 (+)
XLOC_031920 wnt6a coding upstream 246455 13726844 ~ 13734490 (+)
XLOC_031919 asic4b coding upstream 291954 13606410 ~ 13688991 (+)
XLOC_031926 tmem182b coding downstream 320122 14301214 ~ 14312611 (+)
XLOC_031927 pou3f3b coding downstream 968858 14949950 ~ 14957388 (+)
XLOC_031928 mrps9 coding downstream 999669 14980761 ~ 15029092 (+)
XLOC_031929 dph3 coding downstream 1146415 15127507 ~ 15131196 (+)
XLOC_031930 nck2b coding downstream 1164031 15145123 ~ 15246534 (+)
XLOC_031917 NA non-coding upstream 632709 13344675 ~ 13348236 (+)
XLOC_031915 NA non-coding upstream 713802 13260082 ~ 13267143 (+)
XLOC_031897 AL929243.2 non-coding upstream 2206213 11774617 ~ 11774732 (+)
XLOC_031889 BX548046.3 non-coding upstream 2962413 11018416 ~ 11018532 (+)
XLOC_031888 NA non-coding upstream 2972515 10988645 ~ 11008430 (+)
XLOC_031933 NA non-coding downstream 1324673 15305765 ~ 15308585 (+)
XLOC_031935 CR956630.1 non-coding downstream 1562963 15544055 ~ 15544170 (+)
XLOC_031937 CR759882.1 non-coding downstream 1914542 15895634 ~ 15902635 (+)
XLOC_031938 CR847983.1 non-coding downstream 1957529 15938621 ~ 15940105 (+)
XLOC_031939 NA non-coding downstream 2009843 15990935 ~ 15993964 (+)

Expression


Co-expression Network