XLOC_031926 (tmem182b)


Basic Information

Item Value
gene id XLOC_031926
gene name tmem182b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 14301214 ~ 14312611 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062510
CCTGATATCACTACAGTAACAGGATAGAAAATTGAGATCAAAAATGAATTCAGTcacttaaaacaatattttattagttgtCTTTTAAATTTGTTGAACTGTGTCAGACTTCCTGAAGTCCTGGACTCTAAAAATAGTGGCATCCGGTTTTTTTTTAGTCTTTGGTCATAGTGACCACACTGGTGGAAGATACAGTAGAGCGTTTTGCCTGAAGGAATACATATAATGTAGACCGATTGTTAAAAGAAAAGCTGGACAGTGTTAGTAACACAAACTAAAAAGTAATGAGCATTTTGAAGCGAGTGGCTGTTTAGAGTTTGCAGTATGCATCTGGTAGTTTTAAGCTTCCTGGCTGGATTTTTTGGAGCTTTAAGTTCAGTGCTCCTCCTGGGGTCTCTTGGGTCTGATTATTGGCTTATGGTGTTTGAATCGTGTGGTGATTCGGCCACTGAGgATATCTCTCAAACATACCCAGGCAGTAAAGAACAGACAGAAAACCCCCTTCTGTTCTATCATGAGGGTCTCTTTTGGAGATGTTCTTACCATAGCAGAGTATTTGGAGAGAAGGACAGCATGTTGGCTTTGTGGATCACTAATCTGCCATCCCAGAAACTTTGTGTCCCAGCCTACTTGTCTCATGCTCCCAGTTCAGGACATCTCAACAGCATTCAAACCTCAGTTTCTGTCACAGTGCAAAGGGCCTTCTGGTGTGCTATATTTGTGGTGGGTGTCTTCTTAGTGATGATTGGTGGTTTCATCACTATCTGTGCAACACCAGGAACCAGCCGCCGGCTTTATGAGGCTGGAGGGGTTTTCTTTATAACCGGTGGTGTCTTAATTATGTCTGTAGTGCTGCTGTTTGCTGTGTGGGTACAGGTCTCGGACTCTTTGGAGCGGTACGGCCTCCAGCGCAGGCGTTTCGTGTGCCCTAGTCTGCAGCTCCACGTTCACTATGGTCCGTCTTTTATGTTGGCTCCCACCGCTGCTTTCCTCTGCCTGCTCACCGGCCTGCTTCTCCTGCTTATTCCCTCAGCCAGCAGAGcatcagacacaaacacacagatccGGCTGTCAGCACTCAGAGAAGACGATGTGTAGTGTTGTCTCGTGGACATGACGGTGACTCTTTTCCAATGTTCATGACAATCAAGATTCTTTCATCATTAAACGGATAGTGAACTCAAAAATGGAAAAAATCCCCTCTCACCCCCAAGCCACCATCTGTGTTTATGACCTTTTTTTAGATACAAAAACGGTCTTTATAtagtatttatacattttttcctGACTCCACCAACTTTACTGTCTTGACCTTAtacttgtttattgtttttgtcattgttttcgAATTTCCTaatc

Function

symbol description
tmem182b Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM182 (transmembrane protein 182).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-131121-565 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM182 (transmembrane protein 182).

Ensembl:

ensembl_id ENSDARG00000087285

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062510 True 1359 mRNA 0.43 5 14301214 14312611

Neighbor

gene id symbol gene type direction distance location
XLOC_031924 ptprnb coding upstream 313475 13920479 ~ 13987739 (+)
XLOC_031925 dre-mir-153b coding upstream 320122 13980945 ~ 13981092 (+)
XLOC_031923 dnpep coding upstream 380820 13896264 ~ 13920394 (+)
XLOC_031922 tmem198b coding upstream 431056 13779857 ~ 13870158 (+)
XLOC_031921 cdk5r2a coding upstream 556533 13742899 ~ 13744681 (+)
XLOC_031927 pou3f3b coding downstream 637339 14949950 ~ 14957388 (+)
XLOC_031928 mrps9 coding downstream 668150 14980761 ~ 15029092 (+)
XLOC_031929 dph3 coding downstream 814896 15127507 ~ 15131196 (+)
XLOC_031930 nck2b coding downstream 832512 15145123 ~ 15246534 (+)
XLOC_031931 si:ch73-23l24.1 coding downstream 938061 15250672 ~ 15259419 (+)
XLOC_031917 NA non-coding upstream 952978 13344675 ~ 13348236 (+)
XLOC_031915 NA non-coding upstream 1034071 13260082 ~ 13267143 (+)
XLOC_031897 AL929243.2 non-coding upstream 2526482 11774617 ~ 11774732 (+)
XLOC_031889 BX548046.3 non-coding upstream 3282682 11018416 ~ 11018532 (+)
XLOC_031933 NA non-coding downstream 993154 15305765 ~ 15308585 (+)
XLOC_031935 CR956630.1 non-coding downstream 1231444 15544055 ~ 15544170 (+)
XLOC_031937 CR759882.1 non-coding downstream 1583023 15895634 ~ 15902635 (+)
XLOC_031938 CR847983.1 non-coding downstream 1626010 15938621 ~ 15940105 (+)
XLOC_031939 NA non-coding downstream 1678324 15990935 ~ 15993964 (+)

Expression


Co-expression Network