XLOC_031938 (CR847983.1)



Basic Information


Item Value
gene id XLOC_031938
gene name CR847983.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 15938621 ~ 15940105 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00062526
AGTACATCAGAAGACGCGCACTTGAACAGTCATTTTTACGGCTAGTTCAGCAAGAGTCCGAAAAAAGCGAAGAGAAAACAGTTTACAGTGTTTTACTGCGTTTTACTTATGTCGATATTGTGTTCTACTGCAACAGCAATGGCTAACAGCTCAACAGaaacacAACCAAACACTATGAAGAACAGCCTTCGTGCATTCTTCAGGAATATATGGCTGGCTGTACAAAACGCCAATCAGTCCGGAAGTCGAGGCAGTAAAGTGTCTCCTTTTCAGCCTCCGTCTGAGACAGAACCAGCGGCTCCACAGCCAGGCCCATCAACAGATGATCCTCAGCCTGCTCTGTCCAGCTTTGAGTCTCTGGCTGTAGACGATCAGACTGATCCTCAGTCTTGTCTGTCCAGCTTTGAGCCTCAGGCTGTAGACGATCAGACTGATCTCCAGCTTAGTCCATCCAGCAACAAGCCAGCAAACTTTGAAGGAAATCCATCCATTGGAGAACCAGCTAAAGAAACTCAACCAAAAAGAAAGAAGAACAGCCTTCATGCATTCTTCAAAAGGAAATGGCTGTCTGTACAAAAAAG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097529

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00062526 True 581 lncRNA 0.46 3 15938621 15940105

Neighbor


gene id symbol gene type direction distance location
XLOC_031937 CR759882.1 coding upstream 35986 15895634 ~ 15902635 (+)
XLOC_031936 iqca1 coding upstream 45572 15762647 ~ 15893049 (+)
XLOC_031935 CR956630.1 coding upstream 394451 15544055 ~ 15544170 (+)
XLOC_031934 tmtops2a coding upstream 490625 15373153 ~ 15447996 (+)
XLOC_031933 NA coding upstream 630036 15305765 ~ 15308585 (+)
XLOC_031939 NA coding downstream 50830 15990935 ~ 15993964 (+)
XLOC_031940 gbx2 coding downstream 91084 16031189 ~ 16034286 (+)
XLOC_031941 NA coding downstream 454524 16394629 ~ 16397525 (+)
XLOC_031942 ccdc80l1 coding downstream 466618 16406723 ~ 16423323 (+)
XLOC_031943 zgc:161969 coding downstream 528671 16468776 ~ 16475879 (+)
XLOC_031925 dre-mir-153b non-coding upstream 1957529 13980945 ~ 13981092 (+)
XLOC_031917 NA non-coding upstream 2590385 13344675 ~ 13348236 (+)
XLOC_031945 NA non-coding downstream 651880 16591985 ~ 16674684 (+)
XLOC_031946 NA non-coding downstream 727353 16667458 ~ 16669146 (+)
XLOC_031948 NA non-coding downstream 859097 16799202 ~ 16809226 (+)

Expression



Co-expression Network