XLOC_031941



Basic Information


Item Value
gene id XLOC_031941
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 16394629 ~ 16397525 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00062529
CGTAGGTGTGACACTAGTAGGGTTTGTATCCAATAAAGGTTAAACATGTGCAGGTTTTACTGGCGAACAGACATGAACTTAAGGTGCACCCCTTTTATCTGGTGGAAGGAGTGCTTTCAACAAGATGATCCCTGCAACATTACACACGATATTCAGGGTTGCTTTGAAGACCATGATGAAAAGGTGTTGCCCTGACCTCCAGATTCCCAACTGAGCATCTGTGGGATGTGCTGAACCAACAAGTTTGATCCATGGCAGCTTCATCACGCAAGCTACAGGATCTGCTGCCAGTGGTGCCAGAAAACAGGGCACCTTCACAGTTCTCGTAGAGTCCATGCCTCACTAGGTCTGCGCTGTTTTGGCAGCATGCAAAAGACCAACAGCTTATTAGACAGGTGGTCATAATGTGTGCCTCATCTGTGTATAAACTGTCATTAAAGGGTTCActtcagcaacaaaaaaaaaatc

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00062529 True 468 lncRNA 0.46 2 16394629 16397525

Neighbor


gene id symbol gene type direction distance location
XLOC_031940 gbx2 coding upstream 360343 16031189 ~ 16034286 (+)
XLOC_031939 NA coding upstream 400665 15990935 ~ 15993964 (+)
XLOC_031938 CR847983.1 coding upstream 454524 15938621 ~ 15940105 (+)
XLOC_031937 CR759882.1 coding upstream 491994 15895634 ~ 15902635 (+)
XLOC_031936 iqca1 coding upstream 501580 15762647 ~ 15893049 (+)
XLOC_031942 ccdc80l1 coding downstream 9198 16406723 ~ 16423323 (+)
XLOC_031943 zgc:161969 coding downstream 71251 16468776 ~ 16475879 (+)
XLOC_031944 si:ch73-193c12.2 coding downstream 96230 16493755 ~ 16499599 (+)
XLOC_031945 NA coding downstream 194460 16591985 ~ 16674684 (+)
XLOC_031946 NA coding downstream 269933 16667458 ~ 16669146 (+)
XLOC_031935 CR956630.1 non-coding upstream 850459 15544055 ~ 15544170 (+)
XLOC_031933 NA non-coding upstream 1086044 15305765 ~ 15308585 (+)
XLOC_031948 NA non-coding downstream 401677 16799202 ~ 16809226 (+)
XLOC_031953 BX511311.5 non-coding downstream 653514 17051039 ~ 17051135 (+)
XLOC_031955 NA non-coding downstream 660667 17058192 ~ 17274417 (+)

Expression



Co-expression Network