XLOC_031944 (si:ch73-193c12.2)


Basic Information

Item Value
gene id XLOC_031944
gene name si:ch73-193c12.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 16493755 ~ 16499599 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062533
GGACAGAAGAAAACAATGCCAAACAAATCACTAAACTAAAATGGGCTCAGAggaaatgatttttaaatGGACTGATGCCAACACGGCAGATCTGATTGTGTGGAGAGTCACTAACAACAGTCTGTTTACTGGCAGGAGAAATGCAGCCATTAAAGCATACGAGTTGTATGTGAAAGAGAAACAACTGCAAGGGAAAGTGGCACCTACGTGGGTTCGAAAGAAATGGGAGAATCTAAAACAGAAGTATAAGGACCTCAAAAGCCTTCGTACAGCGGATGGAGAGTCAGCATCTGCGACCTGGAAGTGGTATTCAGTGATGGATGGAGCGCTGAACAGCGAGAACCCAATCACCCACATCATCACACCCGTCCGCGTGACCATACCGGCCCCGGATGCTCCTCCCACCAAGCAGAGGAAGCAAGCGGATTGGCTGACGGCCCTGCAAGAATTGGAGAAGAGGCAGGAAGAGAGAGAAAGGCAAGCGGCAGAGAGAGAAGACGAGAGAGACCGACGGTCCACCGCCAGAGAAGACGAGAGAGACCGACGCGCTCTGGAGAGAGAAGCCGAAAGAGATCGAAGAGCTGCGGAGAGAGAAGAAATCAGAGAGAGACTGGTGCTGGAGAGAGAAGAGAGGAGAGAGCGGGAAATGTTTGCCCGAGAGGAGCGCTGGGAGAAAGAGATGCTAGCTAGAGAAGAGCGGCAGGAAAGAGACTACAGAGAAAGAGAGGAGAGGAGGGAAAGAGAAGCCGCTGCTAGAGAAGAAAGGCTCTTTAAAGTCCTCGAGACATTTCTGGCCAACAAGTAA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-131127-646 No description available

Ensembl:

ensembl_id ENSDARG00000076865

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062533 True 805 mRNA 0.51 4 16493755 16499599

Neighbor

gene id symbol gene type direction distance location
XLOC_031943 zgc:161969 coding upstream 17876 16468776 ~ 16475879 (+)
XLOC_031942 ccdc80l1 coding upstream 70432 16406723 ~ 16423323 (+)
XLOC_031941 NA coding upstream 96230 16394629 ~ 16397525 (+)
XLOC_031940 gbx2 coding upstream 459469 16031189 ~ 16034286 (+)
XLOC_031939 NA coding upstream 499791 15990935 ~ 15993964 (+)
XLOC_031945 NA coding downstream 92386 16591985 ~ 16674684 (+)
XLOC_031946 NA coding downstream 167859 16667458 ~ 16669146 (+)
XLOC_031947 pimr12 coding downstream 237272 16736871 ~ 16737608 (+)
XLOC_031948 NA coding downstream 299603 16799202 ~ 16809226 (+)
XLOC_031949 pimr21 coding downstream 370405 16870004 ~ 16871322 (+)
XLOC_031938 CR847983.1 non-coding upstream 553650 15938621 ~ 15940105 (+)
XLOC_031937 CR759882.1 non-coding upstream 591120 15895634 ~ 15902635 (+)
XLOC_031935 CR956630.1 non-coding upstream 949585 15544055 ~ 15544170 (+)
XLOC_031953 BX511311.5 non-coding downstream 551440 17051039 ~ 17051135 (+)
XLOC_031955 NA non-coding downstream 558593 17058192 ~ 17274417 (+)

Expression


Co-expression Network