XLOC_031950 (pimr28)


Basic Information

Item Value
gene id XLOC_031950
gene name pimr28
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 16895685 ~ 16896994 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062537
GAATTCTgactgcatataaaaacaatcaaacccatcgcaatctgttggttgagagacgaggcgactttgcagagcatttctgtgcgaatcctgagatttctgaagctgttggaggatttctgagagaaaaagacttattttaaagagcacaatttctctaatcatctttattttagttatttttctgattatttttttaaatacaattttgttgctgttttttcattccttcttcttcttcttcttcttcttttttctttactttgttttacatttattttcatatttgtctgtatttgtctgttttattgcaggttggaggagattgtccatgtcccacatgggtgaagaaagaggagaagatacacgggacggcaccactgagcttcctggttttttggctcctctgccttcacatttggctgattctgcatccacagaccagaggaacagcaagaggaaaaggcagagcagcagccagcaaacggcgtccacctcgtccagcagaccagccaaacgctctcgcagagacttgtacctgaagggcccgttgctgggacgaggtggattcggctctgtgtttgctgggatgcgcaggtctgatggactgccagtggccatcaagtacgtgtcgaaggaccggacccccgaacgactgaaagttgatggtCTGGGTCGGCTGCCGCTTGAGGTGGCATTGATGACCCGTGTTGCgtcagctcctgcctgccccagtgtcctgcagctgctggactggtttgaccgtcccagacgctacatcctgatcctggagcgaccggatccttgccaagatctccagagcttctgtgaggagaacggctgtctggatgagcgtctggccaagaaa

Function

symbol description
pimr28 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096880

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062537 True 868 mRNA 0.48 5 16895685 16896994

Neighbor

gene id symbol gene type direction distance location
XLOC_031949 pimr21 coding upstream 24363 16870004 ~ 16871322 (+)
XLOC_031948 NA coding upstream 86459 16799202 ~ 16809226 (+)
XLOC_031947 pimr12 coding upstream 158077 16736871 ~ 16737608 (+)
XLOC_031945 NA coding upstream 221001 16591985 ~ 16674684 (+)
XLOC_031946 NA coding upstream 226539 16667458 ~ 16669146 (+)
XLOC_031951 pimr13 coding downstream 52741 16949735 ~ 16951160 (+)
XLOC_031952 pimr8 coding downstream 85619 16982613 ~ 16983924 (+)
XLOC_031953 BX511311.5 coding downstream 154045 17051039 ~ 17051135 (+)
XLOC_031954 pimr16 coding downstream 156656 17053650 ~ 17054966 (+)
XLOC_031955 NA coding downstream 161198 17058192 ~ 17274417 (+)
XLOC_031941 NA non-coding upstream 498160 16394629 ~ 16397525 (+)
XLOC_031939 NA non-coding upstream 901721 15990935 ~ 15993964 (+)
XLOC_031958 BX511311.8 non-coding downstream 308198 17205192 ~ 17205289 (+)
XLOC_031961 CABZ01041996.1 non-coding downstream 420563 17317557 ~ 17317653 (+)
XLOC_031962 BX470083.5 non-coding downstream 484491 17381485 ~ 17381582 (+)

Expression


Co-expression Network