XLOC_031965


Basic Information

Item Value
gene id XLOC_031965
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 17707009 ~ 17707782 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064613
CTGTCCCTCCCCCTCCCCTTGTTATTTACAATATCCCTGCCTTTAGGGTTAAAAGGATCCTCCAGGCCAGACGCCGTGGACGGGGATTTCAATATCTAGTTGATTGGGAGGGGTATGGTCctgaggagaggagttgggtcccGGCTCGGGACATCCTGGACCCCTCGCTGATTGAGGAGTTCCATCTTCGCCAGTCTCTCTCTATCTCGGGCACGCCAAGTGGCGTGCCTGGGGGGAGGGGTACTGTCAGGACACTGGCTTGATCTTTCTCTTCTACCTCTTCCTGCTTTTCATTCTTGCAGCGTGCACTCAGCTGATCATTATTACGAATCAGTGCGCACACGGCTTGCTGCACCTGTTACTGGTCTCTGTTAATTTCCTTGCTATTTAAGCTCTCCTTTTCCCACTTTCTGGTCGCTAGTGTGTCCTGTCATTATTCAGGCTATCTCGCTGCGTTATCTTGATTCCTGTCATTGTCATGCATTACTTCATGTTCTGATTCTGTTTTTCTCTTCTGCCCAGTTTTTGCTCGGTTGCCTGTgttttttctgtttcattttggATTCTCCCCGGCCAGCCACCTACCTTCGACTTCGCCTGTCCGACGCTGAACTTGACTTTCCTCCGTTATCCCATCTGCCTCCCGATCGATGCTTGCCTGCCTGACCTCTCTCACGCCCGCTGATTTGGACACTGTTGCCGAGTTGCCTTTCGCTCCCACCGAGcgatttcattttcatttgagtCACGAGCCTTGGCTCGTCATTTGTTTTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064613 True 774 lncRNA 0.51 1 17707009 17707782

Neighbor

gene id symbol gene type direction distance location
XLOC_031964 CR391990.1 coding upstream 93807 17612044 ~ 17613202 (+)
XLOC_031963 NA coding upstream 173984 17532018 ~ 17533025 (+)
XLOC_031962 BX470083.5 coding upstream 325427 17381485 ~ 17381582 (+)
XLOC_031961 CABZ01041996.1 coding upstream 389356 17317557 ~ 17317653 (+)
XLOC_031960 pimr15 coding upstream 438012 17267681 ~ 17268997 (+)
XLOC_031966 CR376861.1 coding downstream 81699 17789481 ~ 17790513 (+)
XLOC_031967 si:dkey-237i9.8 coding downstream 434841 18142623 ~ 18181589 (+)
XLOC_031968 ccdc40 coding downstream 543358 18251140 ~ 18292410 (+)
XLOC_031969 BX005286.1 coding downstream 546618 18254400 ~ 18261416 (+)
XLOC_031970 card14 coding downstream 590662 18298444 ~ 18350267 (+)
XLOC_031955 NA non-coding upstream 432592 17058192 ~ 17274417 (+)
XLOC_031974 NA non-coding downstream 813077 18520859 ~ 18523946 (+)
XLOC_031978 NA non-coding downstream 1004980 18712762 ~ 18728431 (+)
XLOC_031979 NA non-coding downstream 1171675 18879457 ~ 18880664 (+)
XLOC_031981 CR925723.2 non-coding downstream 1339205 19046987 ~ 19049980 (+)

Expression


Co-expression Network