G1365099


Basic Information

Item Value
gene id G1365099
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 32634465 ~ 32635511 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1559908
gtcctagggctcaggtcctccgagagagagaaagagagaaggagagaattagagaacgcacacttagattcacacaggacaccgaataggacaggagaagtactccagatataacaaactgaccctagccccccgacacataaactactgcagcataaatactggactgtccacagactgtccaggagttggcggatgctttagtccaggtctgggaggacatccctcaggagaccatccgccacctcatcaggagcatgcctagGCATGGTAGGGAGGTCCTACAGGCACATTgggggccacacacactactgagcctcattttgacttgttttaaggacattacatcaaagttggatcagcctgtagtgtggttttccactttaattttgagtgtgactccaaatccagacctccatgggttgataaattagatATCCATtgatagttgaatgtgctgacaacaaaatcacacaaattatgtaaagaaaaaagtatttaataagaatatttcattcattcagatctaggatgtgttactttagtgttccctttatttttttgagcagtgtgtaatGCATAATGCACTTGACTGGTGACGATGAATGGACATGTATTGGGCTTGACATCCATACAAGCGTTGTACTCCAATTTGTACCTCGACATAGGCTATTGTTTACATGTGTATTTCACACTTAAGTGTAGGATCATTTTGCTGGGGGGTAATGATGAGATTCGGGAATGTTCCCCATATGTTTACATGGCatttccattgacctctttaccgcaTCTATGGTCAAGATTTCTGATTCCTGATTTCTGTCACGTGCTGGTTTTTGATGACGAGCAGAAACAATATATTGTATGTCAGTGTGTTATTGTGCTGACTGTATGTCATTTCAAATCATCAGTGAATGATGACTCATGATTGAAACAAATGGAGGGAGGGGTAGTATTTTGTTCTTTCAAGAGAGAAACCTTGTGTTTGTATATATAAATGTGATCAAATGCATTGGCTTTTTGTGACACTCTTCCTTGTACTGCGTC
>TU1559909
gtcctagggctcaggtcctccgagagagagaaagagagaaggagagaattagagaacgcacacttagattcacacaggacaccgaataggacaggagaagtactccagatataacaaactgaccctagccccccgacacataaactactgcagcataaatactggactgtccacagactgtccaggagttggcggatgctttagtccaggtctgggaggacatccctcaggagaccatccgccacctcatcaggagcatgcctagGCATGGTAGGGAGGTCCTACAGGCACATTgggggccacacacactactgagcctcattttgacttgttttaaggacattacatcaaagttggatcagcctgtagtgtggttttccactttaattttgagtgtgactccaaatccagacctccatgggttgataaattagatATCCATtgatagttgaatgtgctgacaacaaaatcacacaaattatgtaaagaaaaaagtatttaataagaatatttcattcattcagatctaggatgtgttactttagtgttccctttatttttttgagcagtgtgtaatGCATAATGCACTTGACTGGTGACGATGAATGGACATGTATTGGGCTTGACATCCATACAAGCGTTGTACTCCAATTTGTACCTCGACATAGGCTATTGTTTACATGTGTATTTCACACTTAAGTGTAGGATCATTTTGCTGGGGGGTAATGATGAGATTCGGGAATGTTCCCCATATGTTTACATGGCatttccattgacctctttaccgcaTCTATGGTCAAGATTTCTGATTCCTGATTTCTGTCACGTGCTGGTTTTTGATGACGAGCAGAAACAATATATTGTATGTCAGTGTGTTATTGTGCTGACTGTATGTCATTTCAAATCATCAGTGAATGATGACTCATGATTGAAACAAATGGAGGGAGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1559908 False 1047 TUCP 0.42 1 32634465 32635511
TU1559909 True 949 TUCP 0.42 1 32634563 32635511

Neighbor

gene id symbol gene type direction distance location
LOC110491830 LOC106567378 coding downstream 5485 32618748 ~ 32628980 (-)
pigt LOC106567380 coding downstream 168154 32436227 ~ 32466311 (-)
LOC110491825 LOC100380856 coding downstream 283612 32230287 ~ 32350853 (-)
LOC110491822 LOC106567384 coding downstream 538332 32056948 ~ 32096133 (-)
LOC110491823 NA coding downstream 547679 32081707 ~ 32086786 (-)
LOC110491831 LOC106567377 coding upstream 1035 32636546 ~ 32735446 (-)
LOC110491834 NA coding upstream 333333 32968844 ~ 32970270 (-)
LOC110491838 LOC106567371 coding upstream 558025 33193536 ~ 33195476 (-)
LOC118939522 LOC106572132 coding upstream 735865 33371376 ~ 33416495 (-)
LOC110491041 LOC106572132 coding upstream 783911 33419422 ~ 33483836 (-)
G1365154 NA non-coding downstream 760 32633476 ~ 32633705 (-)
G1365135 NA non-coding downstream 26277 32607910 ~ 32608188 (-)
G1365134 LOC106613263 non-coding downstream 26800 32607393 ~ 32607665 (-)
G1365133 NA non-coding downstream 27163 32607098 ~ 32607302 (-)
G1365125 NA non-coding downstream 36414 32597729 ~ 32598051 (-)
G1365182 NA non-coding upstream 44817 32680328 ~ 32680547 (-)
G1365184 NA non-coding upstream 46909 32682420 ~ 32682633 (-)
G1365238 NA non-coding upstream 108763 32744274 ~ 32744756 (-)
G1365668 NA non-coding upstream 268225 32903736 ~ 32903953 (-)
G1365669 LOC106567375 non-coding upstream 270076 32905587 ~ 32906331 (-)
G1364348 NA other downstream 614967 32018794 ~ 32019498 (-)
G1364105 NA other downstream 748353 31885749 ~ 31886112 (-)
G1363836 NA other downstream 983768 31639437 ~ 31650697 (-)
G1361619 NA other downstream 2709311 29923871 ~ 29925154 (-)
G1361290 NA other downstream 3136910 29497113 ~ 29497555 (-)
G1366703 NA other upstream 1048500 33684011 ~ 33684473 (-)
G1366756 NA other upstream 1111889 33747400 ~ 33751407 (-)
LOC110491043 NA other upstream 1227995 33863087 ~ 33870055 (-)
LOC110491862 tnfrsf6b other upstream 2442590 35077807 ~ 35079706 (-)
G1369101 NA other upstream 3112465 35747976 ~ 35780436 (-)

Expression


Co-expression Network