G1365238


Basic Information

Item Value
gene id G1365238
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 32744274 ~ 32744756 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1560053
ggcctcccgggtggcgcagtggttaagggcgctgtactgcagcgccagctgtgccatcagagtccctgggttcgggcccaggctctgtcgtaaccggccgcgaccgggaggtccgtgcgtcgtccgggttagggagggattggtcggtagggatctccttgtctcatcgcgcaccagcgactcctgtggcgggccgggcgcagtgcgcgctagccaaggttgccaggtgcacggtgtagcctccgacacattggtaaggctggcttccgggttggatgggcgctgtgttaagaagcagtacggctggttgggttgtgtatcggaggacgcatgacattcagccttcgtctctcctgagcccgtacgggagttgtagcaatgagacaagatagtagctactacaacaattggataccacaaaattggggagaaaaaggggtaaaattcaacaacaaaaaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1560053 True 461 lncRNA 0.58 2 32744274 32744756

Neighbor

gene id symbol gene type direction distance location
LOC110491831 LOC106567377 coding downstream 8828 32636546 ~ 32735446 (-)
LOC110491830 LOC106567378 coding downstream 115294 32618748 ~ 32628980 (-)
pigt LOC106567380 coding downstream 277963 32436227 ~ 32466311 (-)
LOC110491825 LOC100380856 coding downstream 393421 32230287 ~ 32350853 (-)
LOC110491822 LOC106567384 coding downstream 648141 32056948 ~ 32096133 (-)
LOC110491834 NA coding upstream 224088 32968844 ~ 32970270 (-)
LOC110491838 LOC106567371 coding upstream 448780 33193536 ~ 33195476 (-)
LOC118939522 LOC106572132 coding upstream 626620 33371376 ~ 33416495 (-)
LOC110491041 LOC106572132 coding upstream 674666 33419422 ~ 33483836 (-)
LOC118939523 NA coding upstream 739364 33484120 ~ 33531347 (-)
G1365184 NA non-coding downstream 61641 32682420 ~ 32682633 (-)
G1365182 NA non-coding downstream 63727 32680328 ~ 32680547 (-)
G1365154 NA non-coding downstream 110569 32633476 ~ 32633705 (-)
G1365135 NA non-coding downstream 136086 32607910 ~ 32608188 (-)
G1365134 LOC106613263 non-coding downstream 136609 32607393 ~ 32607665 (-)
G1365668 NA non-coding upstream 158980 32903736 ~ 32903953 (-)
G1365669 LOC106567375 non-coding upstream 160831 32905587 ~ 32906331 (-)
G1365671 NA non-coding upstream 163896 32908652 ~ 32908945 (-)
G1365678 NA non-coding upstream 166900 32911656 ~ 32911926 (-)
G1365673 NA non-coding upstream 176815 32921571 ~ 32922140 (-)
G1365099 NA other downstream 108763 32634465 ~ 32635511 (-)
G1364348 NA other downstream 724776 32018794 ~ 32019498 (-)
G1364105 NA other downstream 858162 31885749 ~ 31886112 (-)
G1363836 NA other downstream 1093577 31639437 ~ 31650697 (-)
G1361619 NA other downstream 2819120 29923871 ~ 29925154 (-)
G1366703 NA other upstream 939255 33684011 ~ 33684473 (-)
G1366756 NA other upstream 1002644 33747400 ~ 33751407 (-)
LOC110491043 NA other upstream 1118750 33863087 ~ 33870055 (-)
LOC110491862 tnfrsf6b other upstream 2333345 35077807 ~ 35079706 (-)
G1369101 NA other upstream 3003220 35747976 ~ 35780436 (-)

Expression


Co-expression Network