LOC110496984 (LOC106595027)


Basic Information

Item Value
gene id LOC110496984
gene name LOC106595027
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 7585227 ~ 7597388 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951583.1
CCTGCCATTCTGCGGTAGGAAGCACCTGTCTACGTCACATACAGCACCTGTTTCGGGgtggggtctgtctgtctccgcaGCCAGCAAAGCAAATTCCCGAAAGGTGTCGGACAAGGAAGACAaaacacaagacagacagaaCAATGGGGAGTCTGTTTAGGAGGATAATTTAGGTCTTTCCTTTTTTTTAATAGATAATAAATTGGGCGAGATAATATTTATTAGTTTAATGGATCAATCATCAACGATGAGGAGGTTGATACTGGCCGCGTTCGTCCTCTCTTCCCTACCGACAGAGGTGCAGAGCGTCCAGGTGAATGTTCCTCAGACAGAGAGGAGTACAGCTCTGTTTGCCTCCGTCATCCTGAAGTGTGATTACTCCACCTCCGCTAACCAGCAGGATGTCCAGGTCACCTGGCGATACAAGTCCTTCTGCAAGGACCCCATCCTGGAGTATTACTCCCAAGCGTACCAGAATGCTCTGCAGCTGGGTCAGGACCCGGCCAATGACTGCCCCGACCGCCAGCGCACGGTTAGGATCATCGTCCAGAAGAGAGGCTCCAACGAGGCCATACTGGGCACAGAGTACCGGGAACGCAAGATCTCCGTCCAGAACAAGGCTGACCTGGTGATCAATGAGATCATGTGGTGGGACAACGGAGTTTACTACTGTTCTGTGGAAGCCACGGGAGACACCAGCGGCGGCTTGGATGGCGTGATCCAACTCATGGTCTACAACTGGCTGACGGTGCTGTTCATAGTGATTGGAGCTCTGCTCCTCATCCTGCTCTTCTGTATCTGCTGCTGCCAGTGTTGTCCTCAGAGGTGCTGCTGCTACGTCCGCTGCCCCTGCTGCCCACAGACCTGCTGCTGTCCTGAGAAAGcggtGATGCAGCACAGGATGATGAAGGATGCCCAGAGGGCCATGGGTCCATGGATGGGAGGTCAGCCCATCTACAGCCCCATGAGCCACGGATCCTCACAGATGAACCCTCTGCTGTATGCAGGCTCCCAATCAGGGAAGAGCATCGCCATGGCCCCCATGCCCCTACCCCCTCCCCCATCTGGCTACAACATGCCCCCCAGTGTCCACGCTGCCAGCATCTACGGCAACCAACATCCCGGCAACAAGCAGATGCTGGACTACCTGGAGAGCCAGGTGAGGGGCATGGATGGGACCAGCCCCATGATGCAGCCCCAACCCCACCACCAGCAGCTCCAGATGATACCCCCTCCCCCTCAGCACATGATGCCCCAGCACGTCCCCTTCTCAGCGGGTCCTCCCAGCATGCTCTCTGGCCTGGACGACGGGGCCGTGGAGTACCGGGGGGTCATCCAGATGCCTCCCATCATAGAGCAGCCTGGACGAGGAGGTCGGAGAGGGGGCCAGCCGCCGCTTGCTCCTAAAACACGTCCACCCAGCTCCAGAGGAAGCAGCCGCAGCGAGAGTCGCTTCACCAGTCACCGTGACGACCGCAGCGAAGCCAGCGGGCGCCGTTACCCGTCGCCGTCAAGGAGCCGTGGCATGCCAAGGAGCTACAGTGAAGTCTTTCTGGACGGGGAGAGCCGGGGGGCGCGGGGTCGAATGGGTTCACGTGACGACCTCAGCGACAGGGTccctcgatcccgctccagagacgACCTGTTCGAGGAGCAGCGTCGCGCCCCACCTCCCAGCAACTACTCCCGCTCCCGCAGAGGGTCGTTCAGTTCAGATGAGGATGAAaacagcaggagaggagagggcagaggtcacaggagaggaggaggaggagagatgtatTCAGACATTCCGCCCAGCTATTCTGAATACGAGCCGGGACAGAAACCACCAAGGAGGAATGAGCGTTACTCTGTTAAAACTCTGCTTTAGTTAGTACACTGAATACACACTCCtaaacacaaaccacacacacacacaaaccacacacacacacactcacacaaccccTTCAAAAACATTTACCATCTGACAATGGCATTTGATCCATGCCTTCAATTACACACAATCATATAATCACGCAGATATGAAAGAATCACTCACAGACACACTAGTGCACACTACTTGCTTTCATCACTTCTTCCATTCAGGGAGCCTTTAATTAATGTGTCCCGCTACAGGGCAAGAGTTCTGGCAGGGGCACTGTGGTCATCTGATCTGGGCTCTCACTggctacctctcctctccttctgctgAATGGCATTACAACAGCCCCCTCTGCTGGTTGAACGCTCTCAGTGCAGATAAGTGCCCAATCTTGACAATCTGTTGTGCAAACAAAAGCTGTGTGTGCAGTACAGTAGTCAGCCAGTGAGTCAGCCCTCAACAGTAGATGAGCAGTTTGAAAGGCTCAGCAATGGGAAATCAGAGACTGTAGAAAGAGCTGAGGTTGGGCAATTTTGCAGAGCTAAACAACTGTCTCAGGTCACACTGTCAtgtcctcctccaccctctatcTCCTCATATTGTGCTATtctaattagaggtcgaccgattatggtttttcaacaccgataccgattattggaggaccaaaaaaagacgataccgattattggagggccaaaaaaagacggtaccgattaa

Function

NR:

description
PREDICTED: immunoglobulin-like domain-containing receptor 1, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951583.1 True 2587 mRNA 0.54 7 7585227 7597388

Neighbor

gene id symbol gene type direction distance location
LOC110495403 LOC106595176 coding upstream 3926 7534691 ~ 7581314 (+)
LOC110495411 LOC106574896 coding upstream 53147 7514568 ~ 7532080 (+)
LOC110495412 vegfd coding upstream 136810 7431822 ~ 7448743 (+)
LOC110495413 pir coding upstream 155202 7406926 ~ 7430025 (+)
LOC110496985 LOC106563837 coding upstream 178342 7381975 ~ 7406885 (+)
LOC110495404 LOC106574906 coding downstream 3031 7600419 ~ 7617337 (+)
LOC110518829 LOC106592802 coding downstream 111286 7708674 ~ 7711981 (+)
LOC118941082 LOC106594224 coding downstream 118807 7716195 ~ 7733810 (+)
LOC110511354 LOC106575893 coding downstream 145407 7742795 ~ 7753724 (+)
LOC110511355 LOC106592813 coding downstream 160648 7758036 ~ 7801058 (+)
G1513892 NA non-coding upstream 91063 7493955 ~ 7494164 (+)
G1513889 NA non-coding upstream 93983 7490621 ~ 7491244 (+)
G1513887 NA non-coding upstream 104465 7480409 ~ 7480762 (+)
G1513880 NA non-coding upstream 128196 7456247 ~ 7457031 (+)
G1513921 NA non-coding downstream 9097 7606485 ~ 7607479 (+)
G1513930 NA non-coding downstream 38294 7635682 ~ 7635920 (+)
G1513931 NA non-coding downstream 41252 7638640 ~ 7639463 (+)
G1513934 NA non-coding downstream 53653 7651041 ~ 7651297 (+)
G1513874 NA other upstream 158256 7426583 ~ 7426971 (+)
LOC110513752 LOC106575969 other upstream 488067 7032578 ~ 7102239 (+)
G1513452 NA other upstream 558417 7026208 ~ 7026810 (+)
LOC110516612 LOC106574917 other upstream 875179 6705632 ~ 6710286 (+)
LOC110514219 LOC106594890 other upstream 1014748 6493403 ~ 6573608 (+)
G1513922 NA other downstream 22908 7620296 ~ 7621941 (+)
G1514045 LOC106574979 other downstream 416472 8013860 ~ 8015030 (+)
G1514180 NA other downstream 749839 8347227 ~ 8412799 (+)
LOC110528849 LOC105022557 other downstream 901162 8498352 ~ 8506254 (+)

Expression


Co-expression Network