LOC110511354 (LOC106575893)


Basic Information

Item Value
gene id LOC110511354
gene name LOC106575893
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 7742795 ~ 7753724 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951397.1
TGTGTTGTTATTATCACAGTGGTATGGTGATCCACGTCTATGTGGAGGTGCTGGAGAGGGCCAGCCTGGGGTGCAGGgacacagaggagaacagagtcaCTCTGGTTCTGGGCAAAGGTGGCAGGATCCCATGCCCTGGGATCAAATGTCGgacacagaggtcagaggtcacatgGTACAAGGATGCCAGGCCTGTGTGTGAGATACAGGATAAGAGGACTATCTCTGTGGTAGACAGGTATACTCTTCTGCTGGGCACTGTCTATGTGAGTGATGCTACAGTGTATTTCTGTGACTACACCTACGAAGAAAACGGGATCCCCTGGACAGTCAGGAGATCTGTTAACGTCTCGGTCATACCCGCTGACACCAAAGACCCTCCACAGATCACTTATCCCCATGGCAACGAGGAGGGCGTGGAGCTGGGGGAGCCTCATAATCTGAGCTGTCAGGTGCATTTTGGGTTCCAGAGGACCTTTGACCCAGTGGTCCAGTGGTGGATcagttcccatagcaacgatgaAGGCATGATGAATCTGATGGAGATGGAAGCACAGCAGGTGTGGGAAAGGAGTATTGAAGAGTTTGAGTTCACGGTCACCAGGACAGCTCAAATCCCAGAGGTGACCCAGCTACACCTGGACTCCACCTTCACCTGTCTGGCCCAGAACTCTGTAGGCAACAGCAGCGCCACCATCAGGCTGACAAGGAAATCTGCAGTTTCCCGTGTGCTGGTGATAGTGTGTCCGGTGGTGTCTCTGCTGTTTGTAGCTGGGATGGGCATTACAGTGCACGTCTACTGGCTAGAGATCTCTATTCTCTACAGAATCTACCTCCCATACAAACAGACCACCACAGATGACAAGGAATATGATGCCTTTGTGTCCTACGTGCCCAGCTCTTCCTCTGAGGAGgcggggagaggaggaagagaggaggcgcTGGAGGTGCTCCTGCCCAAGGTTCTGGAGGGGCAGTGGGGCTACCACCTCTTTCTGCTAGAGAGAGACCTGCTGCCGGGCGGAGCGTATACAGAGGATGTGGTGTGTGCGATCCGCAGCAGCAGGCGACTGGTGTGTGTCCTGAGTCCTGACTACCTGGCCAGTACCTGTCTGTTTGAACTGGAGACAGGCATCAGAGCCTTACAACAAGACCCACACTTCAGACTCATCCTCATCTggaccagccccaaccccagcaccaccagccccaaccccagcaccaccagccccaaccctagcaccaccagccccaaccccaaccccagcacCACCAGCCCCAGCACCAGTCCTAGCCCCACCAGCCCCAACCTCATTCCTAGCCCCAGCACCACCAGCCCCAGCACCAGTCCTAGCCCCACCAGCCCCAACCTCAGTCCTAGCCCCAGCACCACCAGCAggcctctatctctacccctgtCTCACACCCTGGGCATGGTGACTCCAGCCTCACCGATGCCCCCACTAGTTCGGAGGGCCATCAGAGTCCTGCCTGCTCTGCACTGGACCCCCCAGGACCAGGGAAGGATGATAACTAGCTCCAACTCTGGATCACGGTTCTGGAGATCCCTCCACAAGGCCATGCCAGCCCAGAGTGGGActgggacagacacacagacactgttagacagacacacagacacccaggACAGAGGGACTGTTTTGTAG

Function

NR:

description
PREDICTED: interleukin-18 receptor accessory protein-like isoform X1

GO: NA

KEGG:

id description
K05174 IL18RAP, ACPL, CD218b; interleukin 18 receptor accessory protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951397.1 True 1667 mRNA 0.56 8 7742795 7753724

Neighbor

gene id symbol gene type direction distance location
LOC118941082 LOC106594224 coding upstream 8985 7716195 ~ 7733810 (+)
LOC110518829 LOC106592802 coding upstream 30827 7708674 ~ 7711981 (+)
LOC110495404 LOC106574906 coding upstream 125483 7600419 ~ 7617337 (+)
LOC110496984 LOC106595027 coding upstream 145407 7585227 ~ 7597388 (+)
LOC110495403 LOC106595176 coding upstream 161494 7534691 ~ 7581314 (+)
LOC110511355 LOC106592813 coding downstream 4312 7758036 ~ 7801058 (+)
LOC110516423 LOC106574939 coding downstream 47899 7801623 ~ 7888704 (+)
spag17 spag17 coding downstream 137463 7891187 ~ 7946810 (+)
LOC118941084 NA coding downstream 208859 7961999 ~ 7965688 (+)
LOC118941085 LOC106575914 coding downstream 715675 8469399 ~ 8472672 (+)
G1513948 NA non-coding upstream 2865 7738170 ~ 7739930 (+)
G1513970 NA non-coding upstream 31436 7711105 ~ 7711359 (+)
G1513958 NA non-coding upstream 54179 7686823 ~ 7688616 (+)
G1513956 NA non-coding upstream 58888 7682339 ~ 7683907 (+)
G1513978 NA non-coding downstream 7703 7761427 ~ 7761639 (+)
G1513987 NA non-coding downstream 50007 7803731 ~ 7804132 (+)
G1514003 NA non-coding downstream 77778 7831502 ~ 7832843 (+)
G1513922 NA other upstream 120854 7620296 ~ 7621941 (+)
G1513874 NA other upstream 315824 7426583 ~ 7426971 (+)
LOC110513752 LOC106575969 other upstream 645635 7032578 ~ 7102239 (+)
G1513452 NA other upstream 715985 7026208 ~ 7026810 (+)
LOC110516612 LOC106574917 other upstream 1032747 6705632 ~ 6710286 (+)
G1514045 LOC106574979 other downstream 260136 8013860 ~ 8015030 (+)
G1514180 NA other downstream 593503 8347227 ~ 8412799 (+)
LOC110528849 LOC105022557 other downstream 744826 8498352 ~ 8506254 (+)
G1514274 NA other downstream 822769 8576493 ~ 8576825 (+)

Expression


Co-expression Network