LOC110495584 (LOC106574807)


Basic Information

Item Value
gene id LOC110495584
gene name LOC106574807
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 9887375 ~ 9893235 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951759.1
GATAGGCTACTTGCACTGAGAGCTGACACTTCCTCCAGCTTTGGCAACATCCGGATTCCAGTCGAGATGGTCATGGCGGAGGGTGCAGCTGTTATGAGGAGGAATCGACCAGGGACTAAAGAAAAGGACTTCTACAACTGGCCCGATGAGTCATTCGAGGAGATGGACAGCACACTGGCTGTGCAGCAGTACATCCAACAGAACATCCGTACAGACTGCTCCAACATGGACAAGATCCTGGAGCCCCCAGAGGGTCAGGATGAGGGGGTCTGGAAGTACGAACACCTCAGGCAGTTCTGTTTGGAGCTGAACGGACTTGCTGTGAAACTACAGGGAGAATGCCACCCAGACACATGCACCCAGATGACGGCAACAGAGCAGTGGATCTTCCTCTGTGCTGCACACAAGACTCCCAAAGAGTGTCCAGCCATCGACTACACCAGACACACTCTGGACGGAGCCGCCTGCCTCCTCAACAGTAACAAGTACTTCCCTAGCAGAGTGAGCATTAAAGAGTCCTCCGTAGGGAAACTGGGTTCAGTTTGCCGGCGGATCTACAGGATATTCTCCCACGCTTACTTCCACCATCGTCAGATCTTTGACAAGTATGAGAACGAGACGTTCCTGTGCCATCGGTTCACACGCTTCGTGATGAAGTACAACCTGATGTCCAAGGACAACCTGATCGTACCCATCATGGAGGATGAGACTAACCCTAACGAAGCAGAGGGCGAGAGTGACGCCTGAGGACTGGGATCTGAAGAGGATCTGCTACACCCTGCCAAACTATTTCAAACACATGGCTGtctcacacacccacccacaaccACACAATACACTAAAGTACACTAAAGTACACTAAAATCACCAGTTTTTAAGTAGAATATTTTCAATATTGTATGAACATCCTAATTTAGCTTGTATGTTTCAGAGAACAAGACAATGTTGTGGTTAAATGACTAACCAATATACACTGTGGCCAGTtaattaggtacacccatctagtaccgggtcaaACCCCGCTTTGCCACCAAAACAGCGTGAATTTTtcagggcatggattctacaaggtgtcagaaacGTTCCACATGGATGTCGGTCCATGCAGACAGGATGGCATCACGCCGTAGCTGCAGATTGGACGGCGGGAACATTGATGCTGCAAACAGCCTGGTCTACCTCATCCCAAAGATGCTCTCTCTATTGGGTTTGGTCAGCAACAATGTTCAGATACGCTGTGACGTTCGATCGTTGCtaaattggtatcaagggacctaatgtgtgccaggaaaacgttccccacaccagtacaccaccgccaccagcctgtaccgttgacaccaggcaggatgggtaaacgcactcatgctgcttacgccaaaacCTGACTCTGTCATCAGCATGAAatgggattcatcagaccaggcaaggtttttccactcctcaattgtccagtgttggtaaTTGCGTTCCCACTAGTGCTTCTTCTTGGTGGAACCCCGTGTGGTCGTCTGCTACagtagcccatccgtgacaaggagcgacgagttgtgcgttccgagatgtcgttctgcacaccactgttgtactgtgccGTTAGTGGCCAGCCTGTTAGCTTgtacgattcttgccattctccttcgacctctcatcaacgagctgttttcacccacagaaCTGCCACTGagtggatgttttttgtttgtcgcaccattcacAGTAAACTCTAGACATTCGTGCGTGAAAATCGCAGGAAGCCGGCTCTTTCAGAGATATTGGATCCGGTGTTCCTAGCAGACGATAACCACGCTCAAAGTCACTTAGGCCGCTAGTTTGACACATTCTAGCATTCAATCAAACAGTTACTGAATGGCTCGATTCCTGTCAGACTACTTTATAGAGCAAGCCacagccacgtgactcactgtaggAGCAAATCATTttggtgaacagggtggtgtaccTGATAAACTGTGACACCCTTTGCTAGTTACTTTATCATGTGCTTTCTGTTTGGTCCTTGGGCAGCGTTTACACAGGCAACCAAATTCTTATGGGCAAAATAATTGCTCtggttggtcaaaagaccaattggtGGCAAAAGATCATAATTGGGCtgtctgtgtaaatgcagcctttgTTGGGTTCTAGGTGTCAGGaactctggtctaatgtagagcTACAAGTTAATATAACAGGTATTTAATaaacaggctacattatacaggttGATATAACAGGTATTTAATAGTCCTGATATTTCtgactatactgtatatagaaccATGTCAGTCTTCCATCCTAGATTTAAGGAAGTGGAAGGACATGATTAATTGCAGACTATAACAAAAATGGTTTTTAGGGTTTTATTCCACTAATGGCTGAGTTTAGGATTAGGGGAGggcaagctgatcctagatcggcTGAGGTTAAGATTAGGGGAGggcaagctgatcctagatcggcTGAGGTTAAGATTAGGGGAGGGCAAgctgatctgtacctaggggaagctTCAACCCAGAGCCATAAAAGGCAACATTGCCGCAGGATAGCCTGTTTACTGGGCCAGAGTTCCTACATCTTTGACACGGCACAAGGACTGCTTTCCTAATAACTGGTTTCTATAGAAGGGGATGGGGGGTGTTTTACGTTCATGCCATTTAGGGCAACAATCTCTCACTGTATTTATTTCAAATAAAGGAATTTGATGTTTTCATTATTGGTGAAAATTAATGACAGCTACTCAGAAATGCCTTAGGTTTTCAAAGCACAATTATGTCTCATTCACTTTCTATATTCTTGTCAAATGATGAACTATTACTCAGGCAACACAACGATGTGTTTGACTGTGTTGCCATTTTGTCCCTGGTGGATATCCATTCACTGTTTCTTATTAAAATATCTGATATATTTACAATCAA

Function

NR:

description
MOB-like protein phocein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951759.1 True 2924 mRNA 0.46 8 9887375 9893235

Neighbor

gene id symbol gene type direction distance location
LOC110495581 LOC106575873 coding upstream 11481 9874710 ~ 9875894 (+)
LOC110495578 LOC106575871 coding upstream 23013 9863382 ~ 9864362 (+)
LOC110497036 LOC106575870 coding upstream 28121 9856851 ~ 9859254 (+)
LOC110527266 LOC106595105 coding upstream 33303 9851453 ~ 9854072 (+)
LOC110527263 LOC106598167 coding upstream 41963 9843565 ~ 9845412 (+)
LOC118941061 NA coding downstream 225425 10118660 ~ 10121810 (+)
LOC110495585 LOC106574888 coding downstream 238295 10131530 ~ 10134128 (+)
LOC118941088 LOC106575836 coding downstream 253714 10146949 ~ 10149129 (+)
LOC118941089 LOC106574813 coding downstream 469335 10362570 ~ 10368578 (+)
LOC110510737 LOC106575810 coding downstream 496393 10389628 ~ 10856330 (+)
G1515722 NA non-coding upstream 43987 9843182 ~ 9843388 (+)
G1515699 NA non-coding upstream 79634 9806954 ~ 9807741 (+)
G1515697 NA non-coding upstream 80740 9805706 ~ 9806635 (+)
G1515694 NA non-coding upstream 89534 9797318 ~ 9797841 (+)
G1515693 NA non-coding upstream 90592 9796519 ~ 9796783 (+)
G1515750 NA non-coding downstream 23090 9916325 ~ 9916610 (+)
G1515751 NA non-coding downstream 26658 9919893 ~ 9920098 (+)
G1515754 NA non-coding downstream 29177 9922412 ~ 9922765 (+)
G1515771 NA non-coding downstream 60266 9953501 ~ 9959326 (+)
G1515773 NA non-coding downstream 66403 9959638 ~ 9959841 (+)
G1515005 cbs other upstream 884249 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1207165 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 other upstream 1210864 8623967 ~ 8676626 (+)
G1514274 NA other upstream 1310550 8576493 ~ 8576825 (+)
LOC110528849 LOC105022557 other upstream 1383039 8498352 ~ 8506254 (+)
G1515776 NA other downstream 81293 9974528 ~ 9975306 (+)
G1515853 NA other downstream 276867 10170102 ~ 10171956 (+)
G1516136 NA other downstream 426075 10310107 ~ 10327138 (+)
G1516637 NA other downstream 1123530 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 1192850 10978682 ~ 11092554 (+)

Expression


Co-expression Network