LOC118941061


Basic Information

Item Value
gene id LOC118941061
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10118660 ~ 10121810 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951407.1
ATGGGGAATAAGGAGAAGGTGTCCACtacccaccccaccaccacccctctcaaCCTCAGTGTCCACTACCCaccccaccaacacccctacCAACCTCAGTGTCCACTACCCACCCTAccaacacccctctcaacctcAGTGTCCACTACCCACCCCATcaacacccctctcaacctcAGTGTACACTACCCACCCTAccaacacccctctcaacctcAGTGTCCACTACCCACCCTAccaacacccctctcaacctcAGTGTACACTACCCACCCCATCAACACCCCTCTCAACGTCAGTGTCCACTACCCaccccaccaacacccctacCAACCTCAGTTGTACACTACCCACCCCATcaacacccctctcaacctcAGTGTCCACTACCCaccccaccaacacccctacCAACCTCAGTGTACACTACCCACCCTAccaacacccctctcaacctcAGTGTCCACTACCCACCCCACCAACACCCCTATCAACCTCAGTGTCCACTACCCACCCCAccaacacccctctcaacctcAGTGTACACTACCCACCCTAccaacacccctctcaacctcAGTGTCCACTACCCACCCCATcaacacccctctcaacctcAGTGTCCACTACCCACCCCAccaacacccctctcaacctcAGTGTACACTACCCACCCCAccaacacccctctcaacctcAGTGTCCACTACCCACCCCAccaacacccctctcaacctcGGTGTACACTACCCACCCCATcaacacccctctcaacctcAGTGTACACTACCCACCCCAccaacacccctctcaacctcGGTGTACACTACCCACCCCATcaacacccctctcaacctcAGTGTACACTACCCACCCCAccaacacccctctcaacctcGGTGTACACTACCCACCCCATcaacacccctctcaacctcAGTGTCCACTACCCaccccaccaacacccctacCAACCTCAGTGTACACTACCCACCCTAccaacacccctctcaacctcAGTGTCCACTACCCACCCTACCAACGCCCCTACCAACCTCAGTGTACACTAACCACCCCATcaacacccctctcaacctcAGTGTCCACTACCCaccccaccaacacccctacCAACCTCAGTGTACACTACCCACCCTAccaacacccctctcaacctcAGTGTCCACTACCCaccccaccaacacccctacCAACCTCAGTGTACACTACCCACCCTAccaacacccctctcaacctcAGTGTCCACTACCCACCCCACTAACACCCCTATCAACCTCAGTGTCCACTACCCACCCTAccaacacccctctcaacctcAGTGTCCACTACCCaccccaccaacacccctacCAACTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951407.1 True 1380 mRNA 0.57 3 10118660 10121810

Neighbor

gene id symbol gene type direction distance location
LOC110495584 LOC106574807 coding upstream 225425 9887375 ~ 9893235 (+)
LOC110495581 LOC106575873 coding upstream 242766 9874710 ~ 9875894 (+)
LOC110495578 LOC106575871 coding upstream 254298 9863382 ~ 9864362 (+)
LOC110497036 LOC106575870 coding upstream 259406 9856851 ~ 9859254 (+)
LOC110527266 LOC106595105 coding upstream 264588 9851453 ~ 9854072 (+)
LOC110495585 LOC106574888 coding downstream 9720 10131530 ~ 10134128 (+)
LOC118941088 LOC106575836 coding downstream 25139 10146949 ~ 10149129 (+)
LOC118941089 LOC106574813 coding downstream 240760 10362570 ~ 10368578 (+)
LOC110510737 LOC106575810 coding downstream 267818 10389628 ~ 10856330 (+)
LOC118941090 LOC106575811 coding downstream 734559 10856369 ~ 10862119 (+)
G1515829 NA non-coding upstream 4784 10113609 ~ 10113876 (+)
G1515820 NA non-coding upstream 17936 10100350 ~ 10100724 (+)
G1515819 NA non-coding upstream 23922 10094404 ~ 10094738 (+)
G1515794 NA non-coding upstream 71426 10039133 ~ 10047234 (+)
G1515796 NA non-coding upstream 73637 10044533 ~ 10045023 (+)
G1515834 NA non-coding downstream 6449 10128259 ~ 10128512 (+)
G1515837 NA non-coding downstream 12796 10134606 ~ 10137597 (+)
G1515841 NA non-coding downstream 17165 10138975 ~ 10139576 (+)
G1515846 NA non-coding downstream 34656 10156466 ~ 10157258 (+)
G1515854 NA non-coding downstream 46281 10168091 ~ 10168751 (+)
G1515776 NA other upstream 143354 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1115534 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1438450 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 other upstream 1442149 8623967 ~ 8676626 (+)
G1514274 NA other upstream 1541835 8576493 ~ 8576825 (+)
G1515853 NA other downstream 48292 10170102 ~ 10171956 (+)
G1516136 NA other downstream 197500 10310107 ~ 10327138 (+)
G1516637 NA other downstream 894955 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 964275 10978682 ~ 11092554 (+)
G1517015 NA other downstream 1511257 11633067 ~ 11634979 (+)

Expression


Co-expression Network