LOC118941088 (LOC106575836)


Basic Information

Item Value
gene id LOC118941088
gene name LOC106575836
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10146949 ~ 10149129 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951773.1
GCGAGAATATAGATTTTTCCACTTCCTCATAAGAAATCGTTCAGCGAGGTATGAATTTCAAGCTTACTAAaagttacatattatattacatttcCATGGTCTTCTTTTGACTATGGCGCTTGTACCATATGATGGGAATTATTTGCCCGTGCTCTCAAAACTACATAATTCGTCTGCCGAGTTCCATTTTGCTGACCACAATGTCAGACTAACTCAGGACTGGAATAAACTCGGAGTAGCTGCTGTCGTCTGGGATGCAGCGGTAGTGATGTGTATGTACCTGGAGCTGGGGCAGGTCGAGCTGACAGGGAAGGTTGCCATCGAGCTGGGGGCAGGCACTGGACTGGTGGGCATCGTGGCAGCTCTTCTAGGTGCCAAAAAAGTGACCATCACAGACCGTGAGCCTGCCTTGGGCTTCCTTGCAGCCAATGTGAAAGAGAACATTCCCCCGGATCGGCTAGGAGCAGTGAAGGTCTCAGAACTGACCTGGGGCCAGGGATTGGAGCGCTATCCCACAGGAGGCTTTGACATAGTGCTGGGAGCAGACATTGTTTACCTGGAAGACACATTTCCATCATTACTGCAAACGATGGAGCACCTCAGCTCAGAGAGTAGTGTAGTGCTACTGGCCTGCAAGATCCGCTACGAGCGAGACACTAACTTCCTGAGCATGCTGAACCAGCGCTTCACAGTACACGAGGTGCACTATGACAAGGAAAGAGACATTCACATCTACAAGGCTGTGAAGCTTCCAGCAAGGAGAGATCTGTAGGAACCAGTGACTGATGGGGGATGTGAGGGGTTTGAATCACAGTGGATGGATCAATGTGCTGTCAATCATTGATGGTTCAGGGAGCTACTACTCATGAATGGACAGTCAGTGAGATGGGTTCATGGAGGATGGTTTTGTTTCATGCAGGGTTGTGTCCAGTAGGGAGAAAATATGGAGCTACAACCCAGCTACTATGGGTGATTGTAATTGTCTTAATTTCATTCATCCTTTTTTGATAAAATGGATTTGAAAACAAATTAAGACATGTGAAAAATAATACCAGAAACACATTTATTAACAGCTGCCAAAAACAAATAGTAGAATCTGTAATATAATTGTTTTGCTTTTTTCATACAAGTGAATGCTGACATTAAGAAATACAACGTTTACAAAATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K21804 METTL21A; protein N-lysine methyltransferase METTL21A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951773.1 True 1168 mRNA 0.45 3 10146949 10149129

Neighbor

gene id symbol gene type direction distance location
LOC110495585 LOC106574888 coding upstream 12821 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 25139 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 253714 9887375 ~ 9893235 (+)
LOC110495581 LOC106575873 coding upstream 271055 9874710 ~ 9875894 (+)
LOC110495578 LOC106575871 coding upstream 282587 9863382 ~ 9864362 (+)
LOC118941089 LOC106574813 coding downstream 213441 10362570 ~ 10368578 (+)
LOC110510737 LOC106575810 coding downstream 240499 10389628 ~ 10856330 (+)
LOC118941090 LOC106575811 coding downstream 707240 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 795274 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 811615 10960744 ~ 10967479 (+)
G1515841 NA non-coding upstream 7373 10138975 ~ 10139576 (+)
G1515837 NA non-coding upstream 9352 10134606 ~ 10137597 (+)
G1515834 NA non-coding upstream 18437 10128259 ~ 10128512 (+)
G1515829 NA non-coding upstream 33073 10113609 ~ 10113876 (+)
G1515820 NA non-coding upstream 46225 10100350 ~ 10100724 (+)
G1515846 NA non-coding downstream 7337 10156466 ~ 10157258 (+)
G1515854 NA non-coding downstream 18962 10168091 ~ 10168751 (+)
G1515855 NA non-coding downstream 27822 10176951 ~ 10177404 (+)
G1515866 LOC107575789 non-coding downstream 61170 10210299 ~ 10210703 (+)
G1515871 NA non-coding downstream 74454 10223583 ~ 10223794 (+)
G1515776 NA other upstream 171643 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1143823 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1466739 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 other upstream 1470438 8623967 ~ 8676626 (+)
G1514274 NA other upstream 1570124 8576493 ~ 8576825 (+)
G1515853 NA other downstream 20973 10170102 ~ 10171956 (+)
G1516136 NA other downstream 170181 10310107 ~ 10327138 (+)
G1516637 NA other downstream 867636 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 936956 10978682 ~ 11092554 (+)
G1517015 NA other downstream 1483938 11633067 ~ 11634979 (+)

Expression


Co-expression Network