LOC118941089 (LOC106574813)


Basic Information

Item Value
gene id LOC118941089
gene name LOC106574813
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10362570 ~ 10368578 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951775.1
CCACAGTATTTCTTATACCAGTTATATTTCCTTTGAAATTAGcaaagggaagtgaacaagtgcacactttgggaggaaggagggatcaTTTGGGACGAAGCCCTGGTGGTTAATTAACAACCTCTGTGTCTGATGTTAGTGTCCCAGAGGTAGTCAGTGTcctcagatctctctctctcattctgactCAGCACGGCAACAGCACGGCAACAGCACGGCAACAGCACGGCAACAGCACGGTAACAGCACGGCAACAGCACGGCAACATGGCTCACCGTCGCTTTGAGGGCAAAGAGCACGTAGCCTCCTACCTGAGGTACAGGGTGTCCCCCCCACAGGAGCTGATCACAGAAATACTGGCATTTCTGGAGAATATGAAAGGAAGGCCGTTCGACCTTGCCGTGGACGTAGGCTGTGGCTCGGGACAGGGGACACTCCTACTGGCCCCTCACTTTACCCAGGTGATTGGGACAGACATCAGCCCCGCCCAGCTGGAGGTGGCTCTGGCCAATAGCAGCGCCCCAAATATCTTCTACAGGCAGTGTCCTGCAGAGGAGTTACCGTTCGCTGACGGCGAGGTAGACTTGGTGACGTCCATGACTGCGGCACAGTGGTTCCACCGACCACGGTTCCTCCAGGAGGCAGACAGGCTGCTGAAGCCCAGAGGGTGTCTGGCCCTGATCagttataccctggacatggaCCTGGAGTACGGACACCACTCCCACACCCTGACTGACATCTGTCATCAGTTCTACAAGAACCTGCTGCCATTTCGCAGTGCCCACATAGGTACTACCACGGTCCCTCTCTACAAACAGATGTATGACTCATGCCCGTACCCAGACAAAGAGTGGCATGAGTGTCTGCGGATGAGGAGACCAATGCCTCTGAGTAGCTACATCGGCATGGTGGAGACCTTCTCTAGCTATCGGGCGTTTCTGAAGCAGGATCCAGTGGAAGCCCACAGGTTCTCCCAGGACTTCAGGAACAGGTTGCTGTCTGAGATGGGGGAGTCGAATCCAGACACAGAGATCACAGTGGTGGTGAAGTATTTCTACTGGCTGGCCTACAAACCTGCTGCAGCCTGATCTGGGGCAAAGACGCAGCAAACCCCACAGACTCTTCCCTTGATGTTTTCTGTTGCATCTAATGGCAAAATGACATAACTAAAAGACAAGACAACAAATAAGACCACGAGTTACATACAACTTAAATCATTAGTCCATCAAAGTCAAAATGAAAAGTGAACCCACATGAACTCCAATACCACCTAAAGAAGATGTTTACGATGTTTCAGAATAGTCTGGATACCCGATGAGCTCAACCATTTCTTGTTTTATAAAGAAACAGCTTGTTAAAATACAA

Function

NR:

description
putative methyltransferase DDB_G0268948 isoform X1

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951775.1 True 1368 mRNA 0.51 6 10362570 10368578

Neighbor

gene id symbol gene type direction distance location
LOC118941088 LOC106575836 coding upstream 213441 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 228442 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 240760 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 469335 9887375 ~ 9893235 (+)
LOC110495581 LOC106575873 coding upstream 486676 9874710 ~ 9875894 (+)
LOC110510737 LOC106575810 coding downstream 21050 10389628 ~ 10856330 (+)
LOC118941090 LOC106575811 coding downstream 487791 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 575825 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 592166 10960744 ~ 10967479 (+)
LOC118941091 NA coding downstream 593207 10961785 ~ 10965666 (+)
G1516154 NA non-coding upstream 9908 10352358 ~ 10352662 (+)
G1516145 NA non-coding upstream 25548 10336778 ~ 10337022 (+)
G1516136 NA non-coding upstream 36705 10310107 ~ 10327138 (+)
G1516131 NA non-coding upstream 61545 10300579 ~ 10301025 (+)
G1516129 NA non-coding upstream 63745 10298545 ~ 10298825 (+)
G1516169 NA non-coding downstream 28704 10397282 ~ 10397546 (+)
G1516172 NA non-coding downstream 33881 10402459 ~ 10402750 (+)
G1516174 NA non-coding downstream 41956 10410534 ~ 10410752 (+)
G1516178 NA non-coding downstream 45863 10414441 ~ 10414717 (+)
G1516179 LOC106569275 non-coding downstream 46179 10414757 ~ 10415193 (+)
G1515853 NA other upstream 190614 10170102 ~ 10171956 (+)
G1515776 NA other upstream 387264 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1359444 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1682360 8677497 ~ 8682383 (+)
G1516637 NA other downstream 648187 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 717507 10978682 ~ 11092554 (+)
G1517015 NA other downstream 1264489 11633067 ~ 11634979 (+)
G1517019 NA other downstream 1274211 11642789 ~ 11643758 (+)
G1517150 NA other downstream 1571484 11940062 ~ 11941897 (+)

Expression


Co-expression Network