LOC110527282 (acadl)


Basic Information

Item Value
gene id LOC110527282
gene name acadl
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10973828 ~ 10979399 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951793.1
CTTCAACAAATGAGACCGTAGCCTACGCTTGAAATACTAGAGAAGATACGCATTCAATTTTATTGTGTCAGTTGCGTAAAAGCGGTAACGTTACGGAGGAAAATGTTGTCAAAAGCTGTCAAAGCGTGTTATTCTGGTGTGAAACATGTATGTCGAGGTGGACAGGTACTTTCTTCTGCAAATGCCAGAATGCAGCACAGCCAGCCCCAGGAAGGGAAAGTTCCCCCGTCCAATCGGCCGGAGACGTCCAGCGCCAAGACTCTGATGGACATCGGCACCCGCAGAATCTTCAACGAGGATCATGACATGTTCAGGGAGAGTGTCCGACGTTTCTGGACAGAGGAGGTGGTGCCCTACCACAAGGAgtggGAGAAGGCAGGTATGGTGAGCAGGGAGCTGTGGCAGAAGGCTGGGGAGCAGGGTCTGTTGGGCATCCTCACTCCAGAGGAGCACGGGGGGATCGGAGGTGATCTGCTGTCTGCAGCTGTGATGTGGGAGGAGCAGATGTACTCTAACTGCTCTGGCCCAGGCTTTGCCCTCCACTCTGAGATCTGCATGCCCTACATCAGTAACTATGGCTCCAAGGAACAGATTGATCGCTTCATACCCCAGATGGCTGCTGGTACCTGCATCGGGGCTATCGCCATGACGGAGCCGGGAGCTGGCAGTGACCTCCAAGGTGTCAGGACGTACGCTAAGAAGGACGGCGATGACTGGATCCTCAACGGCAACAAGGTGTTCATCACCAACGGCTGTATGGCCGACATGGTGATCGTGGTGACCGTAACGAACCGCGAGGCGAAAACAGCGGCCCACGGGATCAGCCTCTTCCTGGTGGAGAAAGGAATGCCGGGCTTCCAGGCGGGCAAGAAGCTGGAGAAGATTGGCCTGATGGCACAGgACACGGCTGAGCTGTTCTTTGAGGACGTGCGTCTCCCTGCTTCTGCCCTGCTGGGACAGGCCAACAAGGGCTTCTACTACCTGATGAACGAGCTGCCACAGGAACGCCTGCTGATTGCAGACATGGCCATCGCCAGCAGTGAGTTCATGTTTGAGGAGACCAGGAACTATGTGACTCAGAGGAAGGCTTTCGGCAAGACCATCGCACACCTTCAGACTGTGCAGCACAAGCTGGCAGAGCTGAAGACTGAGATCTGTGTGGGCCGCTCCTTTTTAGACACCTGTCTCCAGCTTCACACAGAGAAACGCCTGGACTCTCAAACAGCCTCTATGGCCAAGTACTGgGCGTCTGACCTCCAGAACTCTGTGGCCACCCGGTGTCTGCAGCTCCACGGAGGCTGGGGCTACATGTGGGACTACCCCATCGCCAAgGCGTTTGTGGATTCCCGTGTCCAGCCCATCTATGGAGGCACCAATGAGATCATGAAGGAGCTGATCGCCCGCAGTATCGTCAGCCAGAAGTGAGGGAGACGTCCCAGTGACATCACCATGGAGGAGAACTGGGAAGTGGTTAACATAAGTCTCTTAACACCAACAGCAGTTTTGACTGGGTTAGCTACTGAGCTGGTTGTCCGTGCCTTTTTAAGTGATTGTCATGTTCACTGAAGGTAGGCTAGTGGTATTTCTGGGACAAATCTCAACTTCCACTTAAGTCAAATTTTTACTTATTCTCCCATAGAGATCAATGCATGACTGAGAGAAACATTTTACTTAAGTGGAACTTAGGATTCACTCCTCTTTGAATAAGCATGGAGTGAAATAATAGATATTCaggttttgtctttattttctaaTATTGCTGGGAATGTGTTTTTAACAATCTAGACGTAGGGTTGTTTATCCCTTTCCTCTTGGCTTCTACAAAGTCAACAATATGTTATTAAATCCGTCCATCCTTTCACACTTGAAATCTAAAAAGGTTTGAAACCATGATCAAATAAATGCACAGAGTTAAGTTGTATATTTTTGTAATACCACCTTTGTGTTTGTGTCCGACTGTCTTTCCTGCTGTGTTTATGGGGGTGGAAAACTAAATGGTATAGTCCTGTACGTTAGAATGTTTTAGTTTGAATGAACAGCATTTTATCCATCATTTGTTCCTAGCTCCAAACCGGAAGTGCCCTTGCATTCTTCTCCTGATAACTATTAATGGTGAGCAttaaagggggaagggggagacctagtcagttgtacaactgaatgcattcaactgaaatgtgtcttctgcatttaacccctctgaatcagagaggtgcggggggctgacTTAACACCTCAACAAGCTGGGAATTAGAACATTGCAGTATTGTTGAACATTTTAAACGCCACCTTTTTTGACATTTTGTAATGTAATAATATTGCTTGTTTATTAAAGTTATATAATTTTGGTGA

Function

symbol description
acadl Predicted to enable flavin adenine dinucleotide binding activity; long-chain-acyl-CoA dehydrogenase activity; and palmitoyl-CoA oxidase activity. Predicted to be involved in carnitine metabolic process, CoA-linked; fatty acid beta-oxidation using acyl-CoA dehydrogenase; and long-chain fatty acid catabolic process. Predicted to be located in mitochondrial matrix. Predicted to be active in mitochondrion. Is expressed in female organism. Orthologous to human ACADL (acyl-CoA dehydrogenase long chain).

NR:

description
long-chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform X1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0003995 acyl-CoA dehydrogenase activity molecular_function

KEGG:

id description
K00255 ACADL; long-chain-acyl-CoA dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951793.1 True 2352 mRNA 0.49 11 10973828 10979399

Neighbor

gene id symbol gene type direction distance location
LOC118936256 LOC100194643 coding upstream 6349 10960744 ~ 10967479 (+)
LOC118941091 NA coding upstream 8162 10961785 ~ 10965666 (+)
LOC110527277 LOC106575822 coding upstream 16999 10944403 ~ 10956829 (+)
LOC118941090 LOC106575811 coding upstream 111709 10856369 ~ 10862119 (+)
LOC110510737 LOC106575810 coding upstream 117498 10389628 ~ 10856330 (+)
LOC110514120 NA coding downstream 114187 11093586 ~ 11189284 (+)
LOC110527285 LOC106574778 coding downstream 234114 11213513 ~ 11214997 (+)
LOC110495609 LOC106590510 coding downstream 383212 11362611 ~ 11420903 (+)
LOC110528750 LOC106575767 coding downstream 473615 11453014 ~ 11456879 (+)
LOC110495615 LOC106574963 coding downstream 770330 11749729 ~ 11759288 (+)
G1516596 NA non-coding upstream 48748 10923624 ~ 10925080 (+)
G1516597 NA non-coding upstream 48875 10924079 ~ 10924953 (+)
G1516589 NA non-coding upstream 65330 10908275 ~ 10908498 (+)
G1516574 NA non-coding upstream 87372 10886242 ~ 10886456 (+)
G1516622 NA non-coding downstream 11666 10991065 ~ 10991966 (+)
G1516634 NA non-coding downstream 32759 11012158 ~ 11012391 (+)
G1516638 NA non-coding downstream 37790 11017189 ~ 11017403 (+)
G1516639 NA non-coding downstream 38166 11017565 ~ 11018491 (+)
G1516640 NA non-coding downstream 40470 11019869 ~ 11020286 (+)
G1516136 NA other upstream 646690 10310107 ~ 10327138 (+)
G1515853 NA other upstream 801872 10170102 ~ 10171956 (+)
G1515776 NA other upstream 998522 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1970702 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 2293618 8677497 ~ 8682383 (+)
G1516637 NA other downstream 37366 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 106686 10978682 ~ 11092554 (+)
G1517015 NA other downstream 653668 11633067 ~ 11634979 (+)
G1517019 NA other downstream 663390 11642789 ~ 11643758 (+)
G1517150 NA other downstream 960663 11940062 ~ 11941897 (+)

Expression


Co-expression Network