LOC110495630 (LOC106575789)


Basic Information

Item Value
gene id LOC110495630
gene name LOC106575789
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11803177 ~ 11808380 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951852.1
GACACTCCTACATAATAGATTAGGCACTACGGGTAGATGAGCCTGCTTTCTGCCAATGGTTCATACAGGCTATTCTGTATTCTAGTTACTATAGACAATCAATGACAGGGTGTACTAGAGCCACAATACAGCAcatactatttatttattttgaactGTCGGTACCAAGTTCAACAAAAGTAGGAAATAAAACTCCAGTCTCCAGACATGGCTTTAGTGGGAGTTAGAGCTTCATACTACAGGATTCTTAACAAGATCGAGCTCAAACTACCTGCTAAACTGAGACCTTTCTACAACCATCCAGCAGGTCCAAAGACAGTCTTCTTCTGGGCACCAGTGTGTAAATGGggtCTGGTTATGGCTGGCATGGCTGATATGACAAGGCCAGCTGATAAACTGAGTCTCTCTCAGTCTGGAGTACTCATGACTACAGGTGTTATTTGGTCCCGATATTCTCTTGTCATTATTCCGAAGAACTGGGGTCTCTTTTTTGTCAACGGTTTTCTTGGATTGGCAGGAGCCAACCAACTTGTTAGAATCTGGATGTACCAACAGGAAGTAAAGAAGCAACAGGACGAGAAGGCCCAGATCCCCatcatataacacacacacacacacacacacacatatttaattTCTTCATGTCTTAATCCATTTTTATGCAAAGTCTGTAAAGTTAACCCTCAACAGTCACTAACACTGgtttgatatacagtacatatcacaggtcttatatacagtacatatcacaggtcttatatacagtacatatcacaggtcttatatacagtacatatcacaggtcttatatacagtacatatcacaggtcttacatacagtacatatcacaggtcttatatacagtacatatcacaggtcttatatacagtacatatcacaggtcttatatacagtacatatcacaggtcttatatacagtacatatcacaggtcttatatacagtacatatcacaggtcttatatacagtacatatcacaggtcttatatacagtacatatcacaGGTGGCCGGTTACAACTTCATTTGGGAGGGCTGGCTCATAGTGATGGCTGGATCGGAATACATGGAATTTCCATGGTTACCATGTGTTTGATAACATtctattcactccattccagcctcCTGTGATGTGTATATAACCAGGCACTATATTCTAATAGGCCTAATGAATATGTAGGAATTTACATTCCTTCCTTTTTTGTGTTAGAATTATTTTGAGACTAAGGAAATATCAGGTTGTTGCTCGAACTCTCAATATTTGTAATAGATTTGTGCCCTTAAATATTTACTTAGTATTATGTGCATTTAATACAGTTGTTTGTAGGATTACATAATTGTtgtaatttaaataaaataatgtatttatgaAA

Function

NR:

description
mitochondrial pyruvate carrier 2-like

GO:

id name namespace
GO:0006850 mitochondrial pyruvate transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component

KEGG:

id description
K22139 MPC2; mitochondrial pyruvate carrier 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951852.1 True 1394 mRNA 0.37 5 11803177 11808380

Neighbor

gene id symbol gene type direction distance location
LOC118941042 LOC105005823 coding upstream 439 11791601 ~ 11802738 (+)
LOC110495619 slc19a2 coding upstream 23307 11773114 ~ 11779870 (+)
LOC110495622 LOC106575786 coding upstream 30438 11766363 ~ 11772739 (+)
LOC110495615 LOC106574963 coding upstream 43889 11749729 ~ 11759288 (+)
LOC110528750 LOC106575767 coding upstream 346298 11453014 ~ 11456879 (+)
trnas-cga-32 NA coding downstream 529 11808909 ~ 11808990 (+)
LOC118941095 LOC106575791 coding downstream 663 11809043 ~ 11814232 (+)
LOC110497058 LOC106575722 coding downstream 77493 11885873 ~ 11926209 (+)
LOC110527250 LOC106575686 coding downstream 199574 12007954 ~ 12021342 (+)
zswim2 LOC106574814 coding downstream 230362 12038742 ~ 12045602 (+)
G1517042 NA non-coding upstream 38420 11705552 ~ 11764757 (+)
G1517073 NA non-coding upstream 45211 11757256 ~ 11757966 (+)
G1517014 NA non-coding upstream 150898 11632537 ~ 11652279 (+)
G1517010 NA non-coding upstream 177899 11624596 ~ 11625278 (+)
G1517002 NA non-coding upstream 194334 11608248 ~ 11608843 (+)
G1517065 rgn non-coding downstream 8975 11817355 ~ 11820418 (+)
G1517095 NA non-coding downstream 28964 11837344 ~ 11837614 (+)
G1517060 NA non-coding downstream 30147 11838527 ~ 11841346 (+)
G1517101 NA non-coding downstream 52992 11861372 ~ 11862045 (+)
G1517150 NA non-coding downstream 131682 11940062 ~ 11941897 (+)
G1517019 NA other upstream 159419 11642789 ~ 11643758 (+)
G1517015 NA other upstream 168198 11633067 ~ 11634979 (+)
LOC118941092 LOC106575823 other upstream 710623 10978682 ~ 11092554 (+)
G1516637 NA other upstream 786088 11016765 ~ 11017089 (+)
G1516136 NA other upstream 1476039 10310107 ~ 10327138 (+)
G1517414 LOC106575752 other downstream 1025271 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 1126274 12934654 ~ 12936278 (+)
G1517457 NA other downstream 1129143 12937523 ~ 12942494 (+)
G1517545 NA other downstream 1378721 13187101 ~ 13188080 (+)

Expression


Co-expression Network