trnas-cga-32


Basic Information

Item Value
gene id trnas-cga-32
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11808909 ~ 11808990 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnas-cga-32
GTCACGGTGGCCgagaggttaaggcgttggactcgAAATCCAATGGGGTTTCCCCGCACAGGTTCGAATCCTGTTCGTGACG

Function

NR:

description
hypothetical protein EH28_21818

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnas-cga-32 True 82 mRNA 0.57 1 11808909 11808990

Neighbor

gene id symbol gene type direction distance location
LOC110495630 LOC106575789 coding upstream 529 11803177 ~ 11808380 (+)
LOC118941042 LOC105005823 coding upstream 6171 11791601 ~ 11802738 (+)
LOC110495619 slc19a2 coding upstream 29039 11773114 ~ 11779870 (+)
LOC110495622 LOC106575786 coding upstream 36170 11766363 ~ 11772739 (+)
LOC110495615 LOC106574963 coding upstream 49621 11749729 ~ 11759288 (+)
LOC118941095 LOC106575791 coding downstream 53 11809043 ~ 11814232 (+)
LOC110497058 LOC106575722 coding downstream 76883 11885873 ~ 11926209 (+)
LOC110527250 LOC106575686 coding downstream 198964 12007954 ~ 12021342 (+)
zswim2 LOC106574814 coding downstream 229752 12038742 ~ 12045602 (+)
dytn LOC106574817 coding downstream 239989 12048979 ~ 12060014 (+)
G1517042 NA non-coding upstream 44152 11705552 ~ 11764757 (+)
G1517073 NA non-coding upstream 50943 11757256 ~ 11757966 (+)
G1517014 NA non-coding upstream 156630 11632537 ~ 11652279 (+)
G1517010 NA non-coding upstream 183631 11624596 ~ 11625278 (+)
G1517002 NA non-coding upstream 200066 11608248 ~ 11608843 (+)
G1517065 rgn non-coding downstream 8365 11817355 ~ 11820418 (+)
G1517095 NA non-coding downstream 28354 11837344 ~ 11837614 (+)
G1517060 NA non-coding downstream 29537 11838527 ~ 11841346 (+)
G1517101 NA non-coding downstream 52382 11861372 ~ 11862045 (+)
G1517150 NA non-coding downstream 131072 11940062 ~ 11941897 (+)
G1517019 NA other upstream 165151 11642789 ~ 11643758 (+)
G1517015 NA other upstream 173930 11633067 ~ 11634979 (+)
LOC118941092 LOC106575823 other upstream 716355 10978682 ~ 11092554 (+)
G1516637 NA other upstream 791820 11016765 ~ 11017089 (+)
G1516136 NA other upstream 1481771 10310107 ~ 10327138 (+)
G1517414 LOC106575752 other downstream 1024661 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 1125664 12934654 ~ 12936278 (+)
G1517457 NA other downstream 1128533 12937523 ~ 12942494 (+)
G1517545 NA other downstream 1378111 13187101 ~ 13188080 (+)

Expression


Co-expression Network