dytn (LOC106574817)


Basic Information

Item Value
gene id dytn
gene name LOC106574817
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12048979 ~ 12060014 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951873.1
GGTTCGTTCCAACGTTTCTTTCAACAAAGCACAAGTGTGATACCCTCATGGATATGGATAGCATTGAGGGGTTGAATGAAGTGCGTCCTGCTGTGTACCGCACTGCAATGAAGCTCCGTTCCTTACAGAAACTCTGccataTGCATGTTGTGACACTGCGGGAGCTCATCCCAGCCCTGTGCTCTCTGGGCGGAGCCCGGGACACTGGGGCGGGGCTTAGTGAACAGGAAGTGAGACAGTGCATAAACAGGATGTTCCAAAGCGTGTCACAGGAAGTACCTGGGCAGGTGTCGGCAGAGGCGCCAGAACAGACTTGCAGACTGCTGTACAGACTGTTTGACCGGGGACAGACTGGCGCTGTCTGTCGCAGGTCAGTTGAAGccgctctcatctctctctcagcagacacaCTCTCAGCCAAACATAAGgCTCTGGTTCATCTGGCAGAGAGgtgcagtgggagagagagcggcACGGTGAGCAGGAGTGGTCTCAGAGTCGTACTGCAAGACCTCAgccaggTGCCGGCTGTAGTGCAGGAGAACCATGTGTTTGGCTCAGCTGAGACAGCCGTTCGTTCCTGCTTcagtggggtgcTGAGTGCGTGTGTTTGTGAGGAGCATGTCCTCTCATGGCTGCAGTGTGAGCCCTGTCTGTTGCTGTGGCTCCCCACCCTGTACCGCCTGTCAGTCAGCGAGAACGTCACACACTCCGTACGCTGCCACACCTGCAAGGCCTACCCCATCACTGGACTTAGGTATCGCTGTATGAAGTGTGTGAACCTTCATCTGTGCCAAACCTGCTtcctgacagagagacacacaaaaaaacacaagagCTCCCACCCAGTGCTGGAGCACTGCACTCAGCCATCCTGGAAAGAATCCCTAGCCTCATTAGCATACAGCGCCCGCCACGCCTTGTTACCACGGCGATACACacacagggaggcagagaggagaaggTGCCTAATCAGGGCGGAGTCACAAGGGGAGCCGCAGACCAGCTTCACCACCCCTGACCCTTCACCTCAGTCAGCCGCTGAGGACACACCCCCTGACGACAGAGCCCCTCCCACTAATCCTCCCCAACTGCTGGCCACACCCTCAGCTGTTCGGCCCAGGAAGGCATCTAAAGCCCTGCAAACtgaggaagagcaggaggaagCACAGCCACAGAGGAGAGACTCTGTCCTCATTAAGGACATCAAGGACCTGCAGAGGGACAAACGGCTGCTGGAGAGGGAGCTGCAGGTGTGGAGGGTAACGGTTCAGTCGGAGCAGGGCTCGCTGGAGTACCGCTGCTCTGAGATGGAGGCCAACATGGAGACTCTGAGACAACACAACCTCAGACTGCAGGACATGATgtcacagGCTCTTAGCATGTCAGGGACACATGCTGACATCATGCCTCATGCTAATGTCATCCCACATGCTAAATACAGGCCAGAGAGAGACATAGCCTGTCCTGTAGAGTCCCAGAGCTCTGCATCTTCTTCTGgatccagagaaagagaagaggaggaggagagggaagaggaggatgaatgTTGCACAGCAAAGATGCAGAGGAATGAGATGAAGACAGAAGAACAGAgaggtgatgatgatgaagaggaggagcagACTGAGACTGACTCAGTCACAGAGACTCATACTCCCACAATTACCTCTAACCCACAGCCCTGTGATGGGCAGGTCACTGGGCCAATGAAAGACCAGAGTGTCTCTGAAGAGGAGTATTCTGGGATGTGTAGTTTAGCGGAGGAGGAGCGACTGTGTGAGCTGGTGCAACGACTAATAAGTGAGCTGTCgctacacacttacacacatacaGACTGCAGACAGGAGTTGGAGTTGTTGGAGGCTGCAAAGGAAGTGGGGGACTCTGTGTGTCATCTCGTCTATGCAGTGAACACACACTCcgtcccaaacacacacacttcatgcCCCATCCTCCTACACAACCACAGGCCAGAGTATGTATCCAAAAGGCTTCTCTAGACTTTGACGCCTGATGATGTGAGTTATTGTGTACTTTCCTGATATTTGTATGTAGCACAGTTGTACTGAAATTATTCTGCTCTTT

Function

NR:

description
PREDICTED: dystrotelin-like

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951873.1 True 2088 mRNA 0.54 15 12048979 12060014

Neighbor

gene id symbol gene type direction distance location
zswim2 LOC106574814 coding upstream 3377 12038742 ~ 12045602 (+)
LOC110527250 LOC106575686 coding upstream 27637 12007954 ~ 12021342 (+)
LOC110497058 LOC106575722 coding upstream 122770 11885873 ~ 11926209 (+)
LOC118941095 LOC106575791 coding upstream 234747 11809043 ~ 11814232 (+)
trnas-cga-32 NA coding upstream 239989 11808909 ~ 11808990 (+)
LOC110538823 LOC105019738 coding downstream 9035 12069049 ~ 12080939 (+)
LOC110527243 LOC102778049 coding downstream 33888 12093902 ~ 12161272 (+)
LOC110528736 LOC100693318 coding downstream 124695 12184709 ~ 12214234 (+)
LOC118941035 LOC106592175 coding downstream 154536 12214550 ~ 12216720 (+)
LOC110527236 LOC106575759 coding downstream 156700 12216714 ~ 12220754 (+)
G1517176 NA non-coding upstream 51320 11996301 ~ 11997659 (+)
G1517174 NA non-coding upstream 54036 11993702 ~ 11994943 (+)
G1517150 NA non-coding upstream 107082 11940062 ~ 11941897 (+)
G1517101 NA non-coding upstream 186934 11861372 ~ 11862045 (+)
G1517060 NA non-coding upstream 207633 11838527 ~ 11841346 (+)
G1517110 ef1b non-coding downstream 7370 12067384 ~ 12068234 (+)
G1517202 NA non-coding downstream 25876 12085890 ~ 12086420 (+)
G1517204 NA non-coding downstream 28656 12088670 ~ 12088910 (+)
G1517206 NA non-coding downstream 29373 12089387 ~ 12089608 (+)
G1517019 NA other upstream 405221 11642789 ~ 11643758 (+)
G1517015 NA other upstream 414000 11633067 ~ 11634979 (+)
LOC118941092 LOC106575823 other upstream 956425 10978682 ~ 11092554 (+)
G1516637 NA other upstream 1031890 11016765 ~ 11017089 (+)
G1517414 LOC106575752 other downstream 773637 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 874640 12934654 ~ 12936278 (+)
G1517457 NA other downstream 877509 12937523 ~ 12942494 (+)
G1517545 NA other downstream 1127087 13187101 ~ 13188080 (+)
G1519096 NA other downstream 2374748 14434762 ~ 14436120 (+)

Expression


Co-expression Network