LOC118941035 (LOC106592175)


Basic Information

Item Value
gene id LOC118941035
gene name LOC106592175
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12214550 ~ 12216720 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951371.1
CATCAGCTTACATCCGCCAATAACATTCATTGGATGGTTTGGCAGCGATGTTTTCATTGGTCACGACGTTACTTCCCGTTTCAAACAAAACCCGCCGGTTCCTGTTTATGCTAGCGCCAGTAAAAAAAATAAGCTAATAATAACTGTAACAAAAGCTTCAACGTGACAACATCAACTAGTTTCGCTCTAGATAGTCAGTCAGAAAATGCTTCAGACATTGTGGGCACTCAAAGTTAGTACAGTTTGCAGATAGTTGATTAGGGCTACTCTTGGAAAGAATTGGTTAGCTACCATCGTTTTTCTTCCTTCGATTTGGACAGCAGTTGACTGGCCAGCTATGCCAAAGCAAGGGCTTGCTAGACACAAGGTGATATCCTCTGGAAGACTGACTGGTGGGAGGGGCCAGGGCTCAAAGAAGAGGGGAGCAGGGCGTCCACTAGTCACTTCTACTGAGCCGGCTTATTCCCTCTACTCCACAGACTCAGAGGACCAGGTGACAACCATTCACCAGGGTCTGGATCAGTGTGCTGCGCTGCTCAATGTCATTCTCCAGGCAGAGACGGCAGAGGCCAAGCCAATCTCCGTCAGGGGAGCAGGGAAGACTCGAGCCGCCAAATCCCGACCGCTGTGCACTCTGGGAAATGAGAGGGTAGACATAGAGAGGAGGAAGCAGACAAAGAGACCTGTCACTCAGACTGCTAAAAAAACAGCTCCCGTGCAGAAGACGATCCTGTCATCCCTGTCGTATCCTGGGATGAGGAACAAAGTTCAGAGTTTGGCCGGAACGTCAGAGCCGACGTCAGATGCTCGGTTTAACTGTCGCCTGaccacctccacccccaccctgAGTCCCCAAAGACTCCCCCCTAACAACACACTCCCCCCAGGCCCCTCAGTCCCTCTAGCCCAGCCTGGAGGCTCCATCATTGGGGTGGCATCAGTCCACCTGGGGGGCTCTACCTCCACAGCTCCGTTAGCTTCTCCTGGAGCTGTAGCTACCTCCCTAcccacagcccctctcacaggACCAGTGCTCTCTCTCCTCGCAGCCTAGCCAGGAGGCTT

Function

NR:

description
coiled-coil domain-containing protein 14-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951371.1 True 1065 mRNA 0.53 6 12214550 12216720

Neighbor

gene id symbol gene type direction distance location
LOC110528736 LOC100693318 coding upstream 316 12184709 ~ 12214234 (+)
LOC110527243 LOC102778049 coding upstream 53278 12093902 ~ 12161272 (+)
LOC110538823 LOC105019738 coding upstream 133611 12069049 ~ 12080939 (+)
dytn LOC106574817 coding upstream 154536 12048979 ~ 12060014 (+)
zswim2 LOC106574814 coding upstream 168948 12038742 ~ 12045602 (+)
LOC110527239 iqcb1 coding downstream 8665 12225385 ~ 12229990 (+)
LOC118941030 LOC106574872 coding downstream 35297 12252017 ~ 12260675 (+)
LOC110511883 eed coding downstream 58543 12275263 ~ 12281375 (+)
LOC110495539 LOC106575646 coding downstream 70761 12287481 ~ 12308672 (+)
LOC118941037 NA coding downstream 92235 12308955 ~ 12317593 (+)
G1517233 NA non-coding upstream 9136 12204138 ~ 12205414 (+)
G1517231 NA non-coding upstream 11577 12202671 ~ 12202973 (+)
G1517230 NA non-coding upstream 11973 12202291 ~ 12202577 (+)
G1517229 NA non-coding upstream 12412 12201710 ~ 12202138 (+)
G1517116 NA non-coding downstream 29163 12245883 ~ 12246387 (+)
G1517254 NA non-coding downstream 55449 12272169 ~ 12272799 (+)
G1517256 NA non-coding downstream 68576 12285296 ~ 12285618 (+)
G1517274 NA non-coding downstream 129726 12346446 ~ 12348016 (+)
G1517276 NA non-coding downstream 137376 12354096 ~ 12356750 (+)
G1517150 NA other upstream 273445 11940062 ~ 11941897 (+)
G1517019 NA other upstream 570792 11642789 ~ 11643758 (+)
G1517015 NA other upstream 579571 11633067 ~ 11634979 (+)
LOC118941092 LOC106575823 other upstream 1121996 10978682 ~ 11092554 (+)
G1516637 NA other upstream 1197461 11016765 ~ 11017089 (+)
G1517414 LOC106575752 other downstream 616931 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 717934 12934654 ~ 12936278 (+)
G1517457 NA other downstream 720803 12937523 ~ 12942494 (+)
G1517545 NA other downstream 970381 13187101 ~ 13188080 (+)
G1519096 NA other downstream 2218042 14434762 ~ 14436120 (+)

Expression


Co-expression Network