LOC110495542 (LOC105019723)


Basic Information

Item Value
gene id LOC110495542
gene name LOC105019723
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12318790 ~ 12330568 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951338.1
AGGTAAGCGTTATGGTTAGGTAaaagggtagggacgtcccaaggatccctgaTAGCAATGTTTGGTGCTGCTGCGTCATCAGAAGCAGTCTCACGCATGCGTCTCTGTGAGTTTAAGCGGTCGAAGTGTCAGCAGCTAGGTACAGGCAGCGGCAAAAGAAAACCAGCTACAGTCCAGTGCTAGCCCCGACCACCGCAAGGACACAGGGCACATGAACAGTAGAATGGCTGCGTCTTCGAGCAGGGTAACTGGGCCACTCGTTGCTGCCATTGACCAGGGTACGAGCTCGACGCGGTTCCTGGTGTTCAATGCTAAAACAGCCGAGCTCCTCAGTCACCACCAGGTTGAGATCAACCAGAGTTTCCCCAAGGAAGGGTGGGTGGAAGAGGATCCCAAAGAGATTCTGCAGTCTGTGTACGAGTGTATGGAGAGAACCTGTGAGAAACTCACCCAGCTCAATATTGACATCTCCAACATCaaagCCATTGGAGTGACCAATCAGAGAGAGACCACGTTGGTTTGGGACAAAGAGACAGGCGAGCCCCTCTACAATGCTATCGTGTGGCTGGACCTGCGGACCCAGTCGACCGTGGAGCGTCTGATcaacaagacacctgggagaaaCAAGAACCATTTGAAGCACAAGACTGGTCTCCCAATCAGTACGTACTTCAGTGCTGTGAAGCTTCGCTGGCTGATGGATAATGTGGACGAGGTCGCTGAGGCAGTCCTGACACACAGAGCCATGTTCGGCACCGTCGACTCCTGGCTCATCTGGTGTCTGACAGGGGGGAAGAGTGGGGGAGTCCACTGCACAGACGTGACCAACGCCAGCAGGACCATGCTGTTTAACATCCACACCCTGGACTGGGACCCAGAGCTTTGCAAGTATTTTGATATTCCAATGGAGATTCTCCCAAAAGTGAGGAGTTCCTCAGAAATCTACGGCTTAATGAAATCGGGCTCTCTTAGTGGCATACCCATCTCAGGGTGTCTTGGGGACCAATCGGCTGCTCTTGTTGGACAGATGTGCTTTCAGGAAGGGCAGGCCAAAAACACATATGGAACTGGCTGCTTTCTACTCAGAAACACTGGAGCCAAGCCTGTCATGTCGGACCATGGCCTACTAACCACGGTGGCATACAAACTAGGTCGAGACAAACCTGCCTGCTACGCGCTAGAGGGCTCAGTGGCCATAGCGGGGGCTGTGGTTCGCTGGCTGAAGGACAACCTGGGGATCATTCAGACTTCCACAGAGCTGGAGAAACTGGCGGCTTCAGTGGGCACGTCGTATGGTTGTTACTTTGTCCCGGCGTTCTCTGGTCTGTACGCTCCCTACTGGGAGCCCAGTGCACGAGGGATAATCTGTGGTCTGACTCAGTTCACTAACAAGAGTCACCTGGCCTTCGCTGCATTGGAAGCTGTCTGTTTCCAGACTCGAGAGATCCTGGATGCGATGAACCAGGACAGTGGCATCCCTCTGACCCAGCTCCAGGTGGACGGGGGCATGACCTCCAACAGACTACTGATGCAGCTGCAAGCTGATATACTCTGCATCCCCGTTGTGAAGCCCTCCATGCCTGAGACCACTGCCCTGGGGGCAGCCATGGCTGCGGGGGCAGCAGAGGGGGTCAGTGTCTGGAGCCTGCGTCCTGAGGACCTCAGTGAGGTCACCTCTGAGAAGTTTGAGCCACAAATCAACCCTGAAGAGAGTGAGTTTCGATATGCTCGCTGGAAGAAGGCCGTACAGAGAGCCATGAACTGGGAAACCACTGAACCCATCTCTAATGGAAATGGCCACAGGTAGACTGTGGCCCGTGATGCATTGCAGTGGATCAGAAGGGGCGGGTCCAGGAAAGGACACACCCTGCTCTTCTTCAGTTTTCCCGGACCACTCCCTCCCCGTACCTTTGGTTGAATGGCCAAAACACAAACGTTCCAATCCAACCGTTACCTGGGAACCCAACTGTTGGCCTGGAGCCCAGTAGCTGATGGGAACTGTAGTGTGGAATGGACCCAGTATGAATAAATCTGGTGTTTAGGAATGATGTTGCTCTACATCCTAATGGACATTGCTCTTCTTGTGTGACTGCGTGAATGGGGGGTGGTGAATATGGGATGGGTTGTGTATGCAATATCTATCCATGTCATTTTTGGTTCCTTGTTTTTGGTCAACGATCAGTTTGTCGAAGGATATTCACTAATGTAGTGCTGTTCACGGAACACAACTCTTCCTCATCTAATCCAAAAACACAATCTGTCAATTGTAACATTGCCCTGCTGTCACTGTCACACATTCCTCCCTTCACTGTTGTGCTTGAACGAATTCTCCCAATGTTATCTTGGGTTCTGAATGAGTTCTCCCAATGTTATCTTGGAAAGGTAGCCTGATGTTGGTAAGGGCCTTGCAATGAACTGCAATGTGGGTTTCTGGAGCACGTTAGATTTTGTCCTGGGTTTGTTTAGTATGTAAATGGTCTGAGAGATGAACCTTTTCTAACCCTGTTTGGTTGAACCCACTGCCTGGAGAGCAGAACTTGAATCTCGTGGCCCTAAGAAATGGTAATGCAGGGTTATTGTAAAGGACTAGTCTTTGTGGTTACTTTCAAGTTGCCATGTATATAGACAGACTGGTTAAGGATATAGTTGCCCTTATGCACTGATTTGGAGGTGGTTAGTGTTCCCCTCTTAGGGAGGACtggggtaagctgatcctagatctggggCAACTTCACTTCTAAGTGAGAGTTTGTCCCATATGGTACTGTTCTCTATGTAGAGTATAACCTTTGACTGGGACGCAGCCTGAGTAAGGGACCCATTGTATATGATTTAATGTACCAAAAAGAAATGTCTCTATGGCAACTGAATACTACTGTAAATTTGGCCAATGGATGCCTTGTCCAGAGTAAGCATTTTAAACACAGTAAGTAAAATAGATAAAGGTTTCAGGTTGGAAGACACCAGACTTTAAAGGCTGGATTCAATCCATATCTTGGAAGATCTGCATTACAGCTGGTT

Function

NR:

description
glycerol kinase-like isoform X6

GO:

id name namespace
GO:0006072 glycerol-3-phosphate metabolic process biological_process
GO:0005975 carbohydrate metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0004370 glycerol kinase activity molecular_function

KEGG:

id description
K00864 glpK, GK; glycerol kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951338.1 True 3021 mRNA 0.50 19 12318790 12330568

Neighbor

gene id symbol gene type direction distance location
LOC118941037 NA coding upstream 1197 12308955 ~ 12317593 (+)
LOC110495539 LOC106575646 coding upstream 10118 12287481 ~ 12308672 (+)
LOC110511883 eed coding upstream 37415 12275263 ~ 12281375 (+)
LOC118941030 LOC106574872 coding upstream 58115 12252017 ~ 12260675 (+)
LOC110527239 iqcb1 coding upstream 88800 12225385 ~ 12229990 (+)
LOC118941038 LOC106574879 coding downstream 13127 12343695 ~ 12344858 (+)
LOC110495532 LOC106574868 coding downstream 50857 12381425 ~ 12385624 (+)
LOC110527229 tuba8l2 coding downstream 59675 12390243 ~ 12404033 (+)
LOC110513922 stk16 coding downstream 74291 12404859 ~ 12415478 (+)
LOC118941034 LOC106575710 coding downstream 117994 12448562 ~ 12454072 (+)
G1517256 NA non-coding upstream 33172 12285296 ~ 12285618 (+)
G1517254 NA non-coding upstream 45991 12272169 ~ 12272799 (+)
G1517116 NA non-coding upstream 72403 12245883 ~ 12246387 (+)
G1517233 NA non-coding upstream 113376 12204138 ~ 12205414 (+)
G1517231 NA non-coding upstream 115817 12202671 ~ 12202973 (+)
G1517274 NA non-coding downstream 15878 12346446 ~ 12348016 (+)
G1517276 NA non-coding downstream 23528 12354096 ~ 12356750 (+)
G1517278 NA non-coding downstream 27347 12357915 ~ 12359042 (+)
G1517279 NA non-coding downstream 28811 12359379 ~ 12360709 (+)
G1517277 LOC106575774 non-coding downstream 34738 12365306 ~ 12366088 (+)
G1517150 NA other upstream 377685 11940062 ~ 11941897 (+)
G1517019 NA other upstream 675032 11642789 ~ 11643758 (+)
G1517015 NA other upstream 683811 11633067 ~ 11634979 (+)
LOC118941092 LOC106575823 other upstream 1226236 10978682 ~ 11092554 (+)
G1516637 NA other upstream 1301701 11016765 ~ 11017089 (+)
G1517414 LOC106575752 other downstream 503083 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 604086 12934654 ~ 12936278 (+)
G1517457 NA other downstream 606955 12937523 ~ 12942494 (+)
G1517545 NA other downstream 856533 13187101 ~ 13188080 (+)
G1519096 NA other downstream 2104194 14434762 ~ 14436120 (+)

Expression


Co-expression Network