LOC110513922 (stk16)


Basic Information

Item Value
gene id LOC110513922
gene name stk16
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12404859 ~ 12415478 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951368.1
GGGCATGAGAAAATACTTTATATCGGACCTGTGTCTGTCATGGATGGAGCATGGGAATTGCCGTTTGAGGGCTTCCATCATTTTAACGTCAACTGGGTAGAGATTCCCATGCGTTAGGCACAATCAACCAAGATTATAATTTAGTACTTTAAAATGGCGTTCCCCATGCGGTCACATACGCTATACGGATACAAAGACAACTACTACATCGCTATGGCCTGTTCACACGCGTAAATGTCCTTGTACTACGTAGAATGATTTCGCCTCCTCCCGCCTGCCTTCcctctttgaggacatgtatttccatggtTAACTTGACTATCTTGTCGATATAATAGAAACTTCGATTGGTGCCGCGTTCGAAACAACTGGTAACTCCGAAATCTCCGACTTCCGTATGTTCAAAACAATTTGGAACTCGGGGAAAAAAACGAGCTCCCACTGGGAAAAATCGATTTGAACGGTCTTCCAACTCCGGCCTCTAAATCTAGAGCGACCTGAAGATCGCTGACGTCATGATTTTACCTTgtatttttccgagttcccatTTTGGAAGGCAGCAACTCACAGGCCTGCGTCATCATTACGCGTTTTATGTACACGGAAGTAGCCAGCAGAAAACAGGACGATAACAGAAGtccatcGGGGTGTTGGTGTGTTGAGTTATGCCCCAGGGAGGATGGGTCAGACCCTGTGTATCTGTTCCCGCGGCTCCATCACCATTGACAACAAAAGATACTACTTCATCCAGAAACTAGATGAAGGAGGGTTCAGCTATGTGGACCTGGTGGAGGGGGTGCAGGACGGGCGTTTCTACGCCCTGAAGAGGATCCTGTGCCATGACCGGGAGGGTCGCCAAGAGGCTCAGACGGAGGTGGAGATGCACCGTCTCTTCAGCCACCCCAACATCCTGGGCCTGGCAGGGCACACCTTCATAGAGAGGGGGGGCAAGAGTGAGGCCTGGATACTGCTGCCCTACGTTCAGAAGGGCAGTCTGTGGTCAGTGCTAGAGAAGCTGAGGGACAAGGGCAGCTTCATGCCAGAGAGACGCATCCTGAAGGTCCTACAGGGCATCTGTTCTGGACTGAAGGCCATGCATGACAGAGGCTACGCACACAGagatcTGAAGCCTACCAATGTACTCCTAGAGGAGGATGACAGGCCGCTGCTGATGGACCTGGGTTCTATGAACCGCTCCAGGATGGAGGTCAAGGGGACCAGGGAGGCCATGACAGTACAGGACTGGGCAGCTCAGAGGTGTACTATATCGTACCGCGCCCCTGAGCTCTTTAACGTGGAGAGCCACTGTGTCATCGATGACCGTACAGACATCTGGtctctgggctgtgtactgtACAGCATGATGTTCCTGGAGGGGCCCTATGACATGGTGTTCCAGAAGGGAGACAGTGTGGCCCTTGCTGTCCAGAACCCAGTTACCATCCCTCAGCCATGCAGTTACTCTGAAAGCCTGCAGAACCTGCTGAGCTCCATCATGGTGTCCAACCCCCAGGAAAGACCTGAcgtcaactggatcctggaccagATACAGGACATGACATGTTCCAGCCCCAACACACAGACCAATATGGTATGATGCTCCTGATCGGGGAACCATGgcaagcctggttcctctctggttccaaCATCTGTGGGTGATGAACTTTGAACTTTATGACCTCTGGACTGTTGTAATGGCGACCCTGACCTCGTCGTTTTCCTCTAGTCTTAGAAGCTCAGGGGATCctaccccatacacacacacctgctattGTGCAGTTGAAACCATATAGACTTACGTCACAAGTCCTCACTGTCCTCTATATGCATGTGCAACAATATGCTCCGACACAGTGTCGGTCAACTCCACATCCAGCTCACCTTGGGGAAATTGAGATTTGGGTGGAGCCATTTTATGACTGCTAGTGAATAGGAAACCCCATGGGTTAAACTACCATCAGACACTAGGGTTGAAGGGGGCCCCGGACCAGGAAAAGGACCTATGGTAAATTCCAGACAGACGGTTTCCATGGAAATGTACTCGGCCATATCTTATATCAGCTTCAAAGGGATTTTAATAACTTGattccagacctgggttcaatacatgagtatttgttatttaaatactttttctgtatatttgagtattttcaaatacacagctcaaatgttatttatttatttgagtaCTTGAATGATTATTTGTAAAGACCAAATAGTCGACCAAATTGTATTTGAAAGtgttttcaaatactattttcaaatacctgggttaaatgcaTGGGAGTGTATTTGAGTGTTTTAACATCatttccaagtgtatttccaaatacattccaatattcaTCTACTTGTTTTTTCAAATATAggttgtctgattgttttgaaaTGTATCGAAAAGCAATTGAAATACCTGAAATAGtattttgaacccaggtctgcttgaTTCATCCTTGAACTTCTTTCAAGTCCATCCTAACTGTATTTATGTGTTATCATCACATAATGCTATACTGTAACAATTCTCTATTTTCCATTCATGACATGTTCATTTAGGCCTGTATGTGTTTGGCAATACCTCACAAGATTCTGTTTTGAGTGTCAACAGGAAGATAAGATAATCTGGTTTTAAGTCTCAGCAGGTTTTGCTCAGTTAACTCTCACTACAGTTGCTTGTTAGTAACTTTTTAATGGTTTCTTTTTTTAAGctgttatttgtgtgtgtgtgtgtgtctatttaagGAGCAATGATTTATTTGTCCATGTATATGCTATATGAACATGTTCTAAATAAGCAAATGAAGTTGGAATACAGATGTTATTGATGATTTCAGTGGAACAATGTAGAATGTACTGGAACTATAAATGGCTGCTGGCTGTTTCGGACTGTTTGTAGCCTAATTCAGCCCATCCAGGAATTTTAGATATTGTGATAGAATAATAGGGAATTGCATAATACTGTTAATACAACACTGAAGGCTTGTTTGTTTCTCATAAGATTGATGTTTTATGggcataattattatttttttttttacatttgtggtACATCTTAATTTGTTATGTATAAGAGGCCCTTTTCACCTACTTTTAGAGTTGTCTGAGGGCCTGACTTTCTTGACGTTGTTATGTGACTTTTATTCCACTCGGGGGAGCCGTGTCCTACAAGTTGGTCAAAGCAGAGGGAGTCGGGGTCTCAAAAGGTTGTCTTAGTTTGGCCAGACCTGTAGGTCTGAGAAAGACTCACTCAGTATGTGAACATATGCAACACCTCTACTCTGACAAACACCAGGGAATAAAATGGTACTGATTCTGA
>XM_036951369.1
GCATGAGAAAATACTTTATATCGGACCTGTGTCTGTCATGGATGGAGCATGGGAATTGCCGTTTGAGGGCTTCCATCATTTTAACGTCAACTGGGTAGAGATTCCCATGCGTTAGGCACAATCAACCAAGATTATAATTTAGTACTTTAAAATGGCGTTCCCCATGCGGTCACATACGCTATACGGATACAAAGACAACTACTACATCGCTATGGCCTGTTCACACGCGTAAATGTCCTTGTACTACGTAGAATGATTTCGCCTCCTCCCGCCTGCCTTCcctctttgaggacatgtatttccatggtTAACTTGACTATCTTGTCGATATAATAGAAACTTCGATTGGTGCCGCGTTCGAAACAACTGGTAACTCCGAAATCTCCGACTTCCGTATGTTCAAAACAATTTGGAACTCGGGGAAAAAAACGAGCTCCCACTGGGAAAAATCGATTTGAACGGTCTTCCAACTCCGGCCTCTAAATCTAGAGCGACCTGAAGATCGCTGACGTCATGATTTTACCTTgtatttttccgagttcccatTTTGGAAGGCAGCAACTCACAGGCCTGCGTCATCATTACGCGTTTTATGTACACGGAAGTAGCCAGCAGAAAACAGGACGATAACAGAAGtccatcGGGGTGTTGGTGTGTTGAGTTATGCCCCAGGGAGGATGGGTCAGACCCTGTGTATCTGTTCCCGCGGCTCCATCACCATTGACAACAAAAGATACTACTTCATCCAGAAACTAGATGAAGGAGGGTTCAGCTATGTGGACCTGGTGGAGGGGGTGCAGGACGGGCGTTTCTACGCCCTGAAGAGGATCCTGTGCCATGACCGGGAGGGTCGCCAAGAGGCTCAGACGGAGGTGGAGATGCACCGTCTCTTCAGCCACCCCAACATCCTGGGCCTGGCAGGGCACACCTTCATAGAGAGGGGGGGCAAGAGTGAGGCCTGGATACTGCTGCCCTACGTTCAGAAGGGCAGTCTGTGGTCAGTGCTAGAGAAGCTGAGGGACAAGGGCAGCTTCATGCCAGAGAGACGCATCCTGAAGGTCCTACAGGGCATCTGTTCTGGACTGAAGGCCATGCATGACAGAGGCTACGCACACAGagatcTGAAGCCTACCAATGTACTCCTAGAGGAGGATGACAGGCCGCTGCTGATGGACCTGGGTTCTATGAACCGCTCCAGGATGGAGGTCAAGGGGACCAGGGAGGCCATGACAGTACAGGACTGGGCAGCTCAGAGGTGTACTATATCGTACCGCGCCCCTGAGCTCTTTAACGTGGAGAGCCACTGTGTCATCGATGACCGTACAGACATCTGGtctctgggctgtgtactgtACAGCATGATGTTCCTGGAGGGGCCCTATGACATGGTGTTCCAGAAGGGAGACAGTGTGGCCCTTGCTGTCCAGAACCCAGTTACCATCCCTCAGCCATGCAGGTCAGTCAGTCCCCTGGCTAGTCAACCCCTAGTTACTCTTCAATCCATCACCCGCTCAGCTTTCAAGGCTAGCAAAATATAATCTATTGATTCCAAA
>TU1736869
tgttttgaaaTGTATCGAAAAGCAATTGAAATACCTGAAATAGtattttgaacccaggtctgcttgaTTCATCCTTGAACTTCTTTCAAGTCCATCCTAACTGTATTTATGTGTTATCATCACATAATGCTATACTGTAACAATTCTCTATTTTCCATTCATGACATGTTCATTTAGGCCTGTATGTGTTTGGCAATACCTCACAAGATTCTGTTTTGAGTGTCAACAGGAAGATAAGATAATCTGGTTTTAAGTCTCAGCAGGTTTTGCTCAGTTAACTTTTTAATGGTTTCTTTTTTTAAGctgttatttgtgtgtgtgtgtgtgtctatttaagGAGCAATGATTTATTTGTCCATGTATATGCTATATGAACATGTTCTAAATAAGCAAATGAAGTTGGAATACAGATGTTATTGATGATTTCAGTGGAACAATGTAGAATGTACTGGAACTATAAATGGCTGCTGGCTGTTTCGGACTGTTTGTAGCCTAATTCAGCCCAT
>TU1736871
atttgtggtACATCTTAATTTGTTATGTATAAGAGGCCCTTTTCACCTACTTTTAGAGTTGTCTGAGGGCCTGACTTTCTTGACGTTGTTATGTGACTTTTATTCCACTCGGGGGAGCCGTGTCCTACAAGTTGGTCAAAGCAGAGGGAGTCGGGGTCTCAAAAGGTTGTCTTAGTTTGGCCAGACCTGTAGGTCTGAGAAAGACTCACTCAGTATGTGAACATATGCAACACCTCTACTCTGACAAACACCAG

Function

symbol description
stk16 Predicted to enable protein serine/threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in Golgi apparatus. Orthologous to human STK16 (serine/threonine kinase 16).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951368.1 False 3319 mRNA 0.44 7 12404859 12415478
XM_036951369.1 False 1553 mRNA 0.51 7 12404861 12409003
TU1736869 False 506 lncRNA 0.34 2 12414542 12415073
TU1736871 True 254 lncRNA 0.44 1 12415201 12415454

Neighbor

gene id symbol gene type direction distance location
LOC110527229 tuba8l2 coding upstream 826 12390243 ~ 12404033 (+)
LOC110495532 LOC106574868 coding upstream 19235 12381425 ~ 12385624 (+)
LOC118941038 LOC106574879 coding upstream 60001 12343695 ~ 12344858 (+)
LOC110495542 LOC105019723 coding upstream 74291 12318790 ~ 12330568 (+)
LOC118941037 NA coding upstream 87266 12308955 ~ 12317593 (+)
LOC118941034 LOC106575710 coding downstream 33084 12448562 ~ 12454072 (+)
LOC110527226 LOC106575709 coding downstream 44531 12460009 ~ 12467899 (+)
LOC110512988 LOC106575668 coding downstream 126786 12542264 ~ 12545786 (+)
LOC110527217 LOC106575668 coding downstream 134177 12549655 ~ 12552772 (+)
LOC110527211 ipo5 coding downstream 137095 12552573 ~ 12569425 (+)
G1517302 NA non-coding upstream 11498 12391778 ~ 12393361 (+)
G1517284 LOC106575774 non-coding upstream 28571 12367547 ~ 12376288 (+)
G1517277 LOC106575774 non-coding upstream 38771 12365306 ~ 12366088 (+)
G1517279 NA non-coding upstream 44150 12359379 ~ 12360709 (+)
G1517278 NA non-coding upstream 45817 12357915 ~ 12359042 (+)
G1517311 NA non-coding downstream 2438 12417916 ~ 12418222 (+)
G1517312 NA non-coding downstream 3891 12419369 ~ 12419744 (+)
G1517318 NA non-coding downstream 23716 12439194 ~ 12439407 (+)
G1517321 NA non-coding downstream 53546 12469024 ~ 12469491 (+)
G1517323 NA non-coding downstream 91625 12507103 ~ 12507368 (+)
G1517150 NA other upstream 463754 11940062 ~ 11941897 (+)
G1517019 NA other upstream 761101 11642789 ~ 11643758 (+)
G1517015 NA other upstream 769880 11633067 ~ 11634979 (+)
LOC118941092 LOC106575823 other upstream 1312305 10978682 ~ 11092554 (+)
G1516637 NA other upstream 1387770 11016765 ~ 11017089 (+)
G1517414 LOC106575752 other downstream 418173 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 519176 12934654 ~ 12936278 (+)
G1517457 NA other downstream 522045 12937523 ~ 12942494 (+)
G1517545 NA other downstream 771623 13187101 ~ 13188080 (+)
G1519096 NA other downstream 2019284 14434762 ~ 14436120 (+)

Expression


Co-expression Network