Gene
RNA
| Item | Value |
|---|---|
| gene id | cd3z |
| gene name | cd3z |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 12886095 ~ 12898735 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| cd3z | CD3Z antigen, zeta polypeptide |
| description |
|---|
| T-cell surface glycoprotein CD3 zeta chain |
| id | name | namespace |
|---|---|---|
| GO:0007166 | cell surface receptor signaling pathway | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0004888 | transmembrane signaling receptor activity | molecular_function |
| id | description |
|---|---|
| K06453 | CD3Z, CD247; CD3Z antigen, zeta polypeptide |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001165113.2 | True | 1187 | mRNA | 0.45 | 7 | 12886095 | 12898735 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495515 | creg1 | coding | upstream | 464 | 12882511 ~ 12885631 (+) |
| LOC110495518 | LOC106574650 | coding | upstream | 6984 | 12874477 ~ 12879111 (+) |
| LOC110527205 | pcid2 | coding | upstream | 56545 | 12749923 ~ 12829550 (+) |
| LOC110497015 | tmem131 | coding | upstream | 232339 | 12622325 ~ 12653756 (+) |
| LOC110497019 | LOC106574742 | coding | upstream | 275715 | 12600823 ~ 12610380 (+) |
| gp91phox | cybb | coding | downstream | 176329 | 13075064 ~ 13080819 (+) |
| LOC110495507 | LOC106574647 | coding | downstream | 203894 | 13102629 ~ 13132209 (+) |
| LOC118941099 | LOC106574646 | coding | downstream | 234382 | 13133117 ~ 13134843 (+) |
| LOC118941100 | NA | coding | downstream | 491294 | 13390029 ~ 13392754 (+) |
| LOC118941043 | NA | coding | downstream | 551422 | 13450157 ~ 13451678 (+) |
| G1517418 | NA | non-coding | upstream | 4103 | 12880736 ~ 12881992 (+) |
| G1517422 | NA | non-coding | upstream | 8825 | 12856514 ~ 12877270 (+) |
| G1517420 | LOC106574661 | non-coding | upstream | 20745 | 12864530 ~ 12865350 (+) |
| G1517417 | LOC106575738 | non-coding | upstream | 31795 | 12841383 ~ 12854300 (+) |
| G1517410 | NA | non-coding | upstream | 80552 | 12789545 ~ 12805543 (+) |
| G1517416 | NA | non-coding | downstream | 75 | 12898810 ~ 12902980 (+) |
| G1517452 | NA | non-coding | downstream | 25664 | 12924399 ~ 12924636 (+) |
| G1517454 | NA | non-coding | downstream | 30189 | 12928924 ~ 12929968 (+) |
| G1517458 | NA | non-coding | downstream | 48636 | 12947371 ~ 12956518 (+) |
| G1517459 | LOC106575727 | non-coding | downstream | 49572 | 12948307 ~ 12948739 (+) |
| G1517414 | LOC106575752 | other | upstream | 13932 | 12833651 ~ 12872163 (+) |
| G1517150 | NA | other | upstream | 944990 | 11940062 ~ 11941897 (+) |
| G1517019 | NA | other | upstream | 1242337 | 11642789 ~ 11643758 (+) |
| G1517015 | NA | other | upstream | 1251116 | 11633067 ~ 11634979 (+) |
| LOC118941092 | LOC106575823 | other | upstream | 1793541 | 10978682 ~ 11092554 (+) |
| G1517456 | LOC106575727 | other | downstream | 35919 | 12934654 ~ 12936278 (+) |
| G1517457 | NA | other | downstream | 38788 | 12937523 ~ 12942494 (+) |
| G1517545 | NA | other | downstream | 288366 | 13187101 ~ 13188080 (+) |
| G1519096 | NA | other | downstream | 1536027 | 14434762 ~ 14436120 (+) |
| G1519538 | NA | other | downstream | 1600051 | 14498786 ~ 14499137 (+) |
