gp91phox (cybb)


Basic Information

Item Value
gene id gp91phox
gene name cybb
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13075064 ~ 13080819 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001171859.1
ATGGGCAACTTTGCTGCCAACGAGGGACTTTCGGTCTTTGTCATTCTGGTATGGCTGGGAATCAACGCTTACCTGTTTGTCCAGTTCTAcatgaacttcctgactgagagATGGTTCTACACACGGGTCCTTCTTGGGGATGCCCTCTCCTGGGCCAGGGCTCCTGCAGCCTGTCTCAACTTTAACTGTATGCTTATTCTGCTGCCAGTCTGCCGGAACCTTCTGTCCTTCCTGCGCGGCTCCATTCAGTGTTGCAGTCGCACAGCTGCTCGACAACTGGACAGAAACATCACCTTTCACAAGCTGGTAGCTTACATGATAGCATTTCACACAGCGGTCCACATCATCGCCCACCTGTTTAACTTTGAGTGGTTCATGGGAGCCCAGCTGTACAGGAACAGCAGCTCTCTGCCCTTTGTGCTGTCCCAGATTGGCACCGGAGACAATGCCTCCTACCTAAACCCCATCAGGACTGACCAGACCAACCCAACCATAGTGATGTTCACTACCATCGCGGGGTTAACGGGCGTGGTCATCACCTTGGCCCTCATCCTCATCATTACATCATCCATGGAGGTCATCCGCAGGTCATACTTCGAGGTTTTCTGGTACACCCATCACCTCTTCATCATCTTCTTCATCGGACTCGTCTTCCACGGCTTTGGGCGAATTGTCCGAGGGCAGACCGCTACAAGTCTCCTGGAGAACAAGCCATCGCAGTGTGCAGATCAGTTTGAGTCATGGGGAAAGAACGGGACCTTCTGCCCTAAGCCAGAGTTTGCTGGGAACCCTCCTATGACATGGAAGTGGGTGGTGGGGCCTATGAtcttgtatgtgtgtgagagactggTCCGATTCTACCGCTCCCAACAGAAGGTGGTCATCACCAAGgtGGTGATGCACCCGTCCAAGACCCTGGAGCTCCAGATGAAGAGGAAGGGTTTCAGGATGGAGGTCGGCCAGTACGTCTTCATGCAGTGTCCCTGCGTCTCCCAGCTGGAGTGGCATCCCTTCACCCTCACCTCCGCCCCCGAGGAGGATCACTTCAGCGTCCACATCCGTATCGTGGGCGACTGGACCCAGGGCCTGTACGAGGCCTGCGGGGGGGACAAGAACGAGACCCAGGAGGCATGGAAACTGCCCAAAATGGCGATAGATGGCCCGTTTGGTACGGCCAGTGAGGACGTGTTTGGCTATGAGGTGGTCATGCTGGTGGGTGCTGGCATCGGGGTCACCCCCTTCGCCTCCGTCCTCAAGTCAGTGTGGTACAAACACATCCAGGAGAACCAGAACGTTTTCACCAAGAAGATCTACTTCTATTGGCTGTGTCCTGAGACCCAGGCGTTTGAGTGGTTTGCTGACCTGCTGCAGTCTCTGGAGGGACAGATGACAGAGAAAGGCATGGTGGACTTCCTCAGCTACAACATCTACCTGACCCGCTGGAAAGAGACCGAGgctGCTCACTTCAGAGTTCACCATGAGGCAGAGAATGACCCTATCACAGGGCTGAAGCAGAAGACTCTGTATGGGAAACCTAACTGGGACAATGAGTTTACTACTATTGGGACAAAGCATCCAGAgaaaAAAGTAGGAGTGTTCCTGTGCGGTCCCACCCAGCTGGCTGACGTCTTGGAGAAGCAGTGCCTGTCTCACTCTGAGGCTGGTGTCAAGTTCATCTTCAACAAGGAAAACTTCTGA

Function

symbol description
cybb Predicted to enable superoxide-generating NAD(P)H oxidase activity. Predicted to be involved in defense response and superoxide anion generation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of NADPH oxidase complex. Predicted to be active in plasma membrane. Is expressed in blood; nervous system; and neutrophil. Human ortholog(s) of this gene implicated in X-linked chronic granulomatous disease; chronic granulomatous disease; and immunodeficiency 34. Orthologous to human CYBB (cytochrome b-245 beta chain).

NR:

description
cytochrome b-245, beta polypeptide

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K21421 NOX2, GP91, CYBB; NADPH oxidase 2

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001171859.1 True 1698 mRNA 0.54 13 13075064 13080819

Neighbor

gene id symbol gene type direction distance location
cd3z cd3z coding upstream 176329 12886095 ~ 12898735 (+)
LOC110495515 creg1 coding upstream 189433 12882511 ~ 12885631 (+)
LOC110495518 LOC106574650 coding upstream 195953 12874477 ~ 12879111 (+)
LOC110527205 pcid2 coding upstream 245514 12749923 ~ 12829550 (+)
LOC110497015 tmem131 coding upstream 421308 12622325 ~ 12653756 (+)
LOC110495507 LOC106574647 coding downstream 21810 13102629 ~ 13132209 (+)
LOC118941099 LOC106574646 coding downstream 52298 13133117 ~ 13134843 (+)
LOC118941100 NA coding downstream 309210 13390029 ~ 13392754 (+)
LOC118941043 NA coding downstream 369338 13450157 ~ 13451678 (+)
LOC110495498 LOC106574751 coding downstream 394255 13475074 ~ 13503268 (+)
G1517511 NA non-coding upstream 14404 13060368 ~ 13060660 (+)
G1517506 NA non-coding upstream 22986 13051227 ~ 13052078 (+)
G1517501 NA non-coding upstream 27683 13043700 ~ 13047381 (+)
G1517489 NA non-coding upstream 50500 13023050 ~ 13024564 (+)
G1517465 NA non-coding upstream 94733 12960141 ~ 12980331 (+)
G1517519 NA non-coding downstream 9650 13090469 ~ 13091536 (+)
G1517528 NA non-coding downstream 56126 13136945 ~ 13137243 (+)
G1517536 NA non-coding downstream 76914 13157733 ~ 13158166 (+)
G1517539 NA non-coding downstream 84835 13165654 ~ 13165876 (+)
G1517540 NA non-coding downstream 85418 13166237 ~ 13166465 (+)
G1517457 NA other upstream 132570 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 138786 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 202901 12833651 ~ 12872163 (+)
G1517150 NA other upstream 1133959 11940062 ~ 11941897 (+)
G1517019 NA other upstream 1431306 11642789 ~ 11643758 (+)
G1517545 NA other downstream 106282 13187101 ~ 13188080 (+)
G1519096 NA other downstream 1353943 14434762 ~ 14436120 (+)
G1519538 NA other downstream 1417967 14498786 ~ 14499137 (+)
LOC110495481 LOC106574739 other downstream 1475507 14556326 ~ 14558589 (+)
G1519733 NA other downstream 1733163 14813982 ~ 14814886 (+)

Expression


Co-expression Network