LOC110495496


Basic Information

Item Value
gene id LOC110495496
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13516342 ~ 13518076 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037378.1
GGTTAACTTATGTCAGGATGGAACTGTCAGCGTGATGGAGATTGGCAGCAACTTCAGCCGATCAGAGGAGCACGTCTCTCTTGTTAGGGCTAGAGTGGTGATGACTGCTGCTCCGAATAGTCCAACCGCGGCAACTCCACCAGAATTGGCCACCACCCAAAAAG

Function

NR:

description
interphotoreceptor matrix proteoglycan 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037378.1 True 164 mRNA 0.52 3 13516342 13518076

Neighbor

gene id symbol gene type direction distance location
LOC110495498 LOC106574751 coding upstream 13074 13475074 ~ 13503268 (+)
LOC118941043 NA coding upstream 64664 13450157 ~ 13451678 (+)
LOC118941100 NA coding upstream 123588 13390029 ~ 13392754 (+)
LOC118941099 LOC106574646 coding upstream 381499 13133117 ~ 13134843 (+)
LOC110495507 LOC106574647 coding upstream 384133 13102629 ~ 13132209 (+)
LOC110497006 LOC106574795 coding downstream 2082 13520158 ~ 13556352 (+)
LOC110495495 LOC106574775 coding downstream 74904 13592980 ~ 13622818 (+)
LOC118941229 NA coding downstream 293160 13811236 ~ 13811288 (+)
LOC110495487 LOC106574771 coding downstream 365880 13883956 ~ 13969189 (+)
LOC110495485 LOC106575653 coding downstream 457034 13975110 ~ 13979887 (+)
G1518359 NA non-coding upstream 75512 13440560 ~ 13440830 (+)
G1518292 NA non-coding upstream 213531 13302593 ~ 13302811 (+)
G1517551 NA non-coding upstream 297681 13218447 ~ 13218661 (+)
G1517544 NA non-coding upstream 330263 13185844 ~ 13186079 (+)
G1518414 NA non-coding downstream 41747 13559823 ~ 13560040 (+)
G1518416 NA non-coding downstream 43521 13561597 ~ 13561803 (+)
G1518422 NA non-coding downstream 50599 13568675 ~ 13568877 (+)
G1518427 NA non-coding downstream 60020 13578096 ~ 13578352 (+)
G1518434 NA non-coding downstream 69919 13587995 ~ 13588199 (+)
G1517545 NA other upstream 328262 13187101 ~ 13188080 (+)
G1517457 NA other upstream 573848 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 580064 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 644179 12833651 ~ 12872163 (+)
G1517150 NA other upstream 1575237 11940062 ~ 11941897 (+)
G1519096 NA other downstream 916686 14434762 ~ 14436120 (+)
G1519538 NA other downstream 980710 14498786 ~ 14499137 (+)
LOC110495481 LOC106574739 other downstream 1038250 14556326 ~ 14558589 (+)
G1519733 NA other downstream 1295906 14813982 ~ 14814886 (+)
il8r il8r other downstream 1380180 14898154 ~ 14901354 (+)

Expression


Co-expression Network