trnaa-ugc-135


Basic Information

Item Value
gene id trnaa-ugc-135
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13516962 ~ 13517036 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-ugc-135
agtcccgtgtagctcagttggtagagcatggcgcttgcaacaccagggttgtgggttcgattcccacggggacTA

Function

NR:

description
Deoxyribonuclease gamma precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-135 True 75 mRNA 0.57 1 13516962 13517036

Neighbor

gene id symbol gene type direction distance location
LOC110495498 LOC106574751 coding upstream 13694 13475074 ~ 13503268 (+)
LOC118941043 NA coding upstream 65284 13450157 ~ 13451678 (+)
LOC118941100 NA coding upstream 124208 13390029 ~ 13392754 (+)
LOC118941099 LOC106574646 coding upstream 382119 13133117 ~ 13134843 (+)
LOC110495507 LOC106574647 coding upstream 384753 13102629 ~ 13132209 (+)
LOC110497006 LOC106574795 coding downstream 3122 13520158 ~ 13556352 (+)
LOC110495495 LOC106574775 coding downstream 75944 13592980 ~ 13622818 (+)
LOC118941229 NA coding downstream 294200 13811236 ~ 13811288 (+)
LOC110495487 LOC106574771 coding downstream 366920 13883956 ~ 13969189 (+)
LOC110495485 LOC106575653 coding downstream 458074 13975110 ~ 13979887 (+)
G1518359 NA non-coding upstream 76132 13440560 ~ 13440830 (+)
G1518292 NA non-coding upstream 214151 13302593 ~ 13302811 (+)
G1517551 NA non-coding upstream 298301 13218447 ~ 13218661 (+)
G1517544 NA non-coding upstream 330883 13185844 ~ 13186079 (+)
G1518414 NA non-coding downstream 42787 13559823 ~ 13560040 (+)
G1518416 NA non-coding downstream 44561 13561597 ~ 13561803 (+)
G1518422 NA non-coding downstream 51639 13568675 ~ 13568877 (+)
G1518427 NA non-coding downstream 61060 13578096 ~ 13578352 (+)
G1518434 NA non-coding downstream 70959 13587995 ~ 13588199 (+)
G1517545 NA other upstream 328882 13187101 ~ 13188080 (+)
G1517457 NA other upstream 574468 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 580684 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 644799 12833651 ~ 12872163 (+)
G1517150 NA other upstream 1575857 11940062 ~ 11941897 (+)
G1519096 NA other downstream 917726 14434762 ~ 14436120 (+)
G1519538 NA other downstream 981750 14498786 ~ 14499137 (+)
LOC110495481 LOC106574739 other downstream 1039290 14556326 ~ 14558589 (+)
G1519733 NA other downstream 1296946 14813982 ~ 14814886 (+)
il8r il8r other downstream 1381220 14898154 ~ 14901354 (+)

Expression


Co-expression Network