LOC110495483 (LOC106575569)


Basic Information

Item Value
gene id LOC110495483
gene name LOC106575569
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14087058 ~ 14485956 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951893.1
TACCGGTCCACATAGTGACTGCGGTCTAGCGAGGGCAGGGGAATGAATCTGGTGTCTGGAAATGCACCACTAAATGCAAATTAACTGCAAGGCAAATAGTATTCAGACCTGTATTTATAGTTTCATATTTGGACTGTATGCACATCTGTTTTCTCCATCCACGGTATTTTTCCCCCGGTGCGTCTGTTGGTGCACGAGGACTCTGCGCGGGCTCTTGGACTTGGAGGACGGATCCATCAAACTCGGATTGTGAGTGTTCGCATAGCGGTACACTGAAGGAAAACCTAATCGGATGTGGTATTACAGAATACTTGTGAAATACAGCCTACATTATAGATAGCTCTCTGCCGCGCTGCAGCCTGTGAGGACCGCACGAGTTTTTTGGGTGGAGAAATTGTGTGTTTTGCAGCGGAGAGGTTTGGGGGACTATTTATAACCAAGGATCGGCAGTCTGGAATGTTTGATTTTCTCCTTCGTTATATGTCAACCTTTTTCTCCTATCAGAGTAGATTTCCCCACCGCCGGTCTTAATATTATTTTCAAATTGACCCTCTGCACCTTTTTTTATTCGGCACTGAAAAAAGCAGATGATATGCATATGTTCTTTGGATTAGACCCTGCTGTGGACAATTTGGCTTTTGCGTGAATGGGATATCTGTGTATTAGGCATATTGTTCAACGACCTTTGTATAAGGAGACGAGGCGTGTTATTAGCATTAGCCTACACCGGCATTGTGATGGTGAACTTTTATGATCGGAACTGACAGCGGAATAGGAACATTTTGGAAACTGCTTGTGGGACACTTGGCCAGGTGAAAAATGAAAGCTCCCATCACACTCCAGATTCTTCTCTATGCTGCTGTGGTCCGAGGTTTCAAAACAGTGTCCAAGAGAGGCTCAGtGGACGACTGCACGGATTGGTCAGTGGACTACTTGAAATACAAAGTGCTTTTGGGGGAACCGGTGCGGATTAAATGTGCTTTATTCTATGGATACATCAGAGCGAACTACACCCACTCCCAGAGTGTGGGACTAAGCCTTATGTGGTATAAAAGTACAGGACACGGAGACTTTGAGGAGCCTATCTCTTTCGACGGCATCAGAATGAACAAGGAGGAGGACGCTATCTGGTTTAGACCCACCGAGCTCCAAGACGTTGGACACTATTCCTGTGTATTGAGGAATTCCACATATTGTATGAAAGTGTCCATGTCACTGACAGTGGCAGAGAACGACACAGACCTCTGCTACAACTCCAAAATGAGGTACTTCGAGAAGGCAGagttaagtaaaagtaaagatatcacCTGTCCGGACATTGAGGATTATGTACAGCCGGGGAAGGAGCCAGAGATAGTATGGTACAAGGAATGCAAGCCAAAGCAGTGGAGACAAAGCATTGTAAGGAGAAGAGATACTCTATCTATCCGGGAGGTGCGTGAAGATGACATTGGAAATTACACGTGTGAATTACAGTTTGGCAGCTTCGTGGTGAGAAGAACTACAGAACTATCTGTTACAGCCCCTCTGACAGACAAGCCTCCAAAGATCCTGTTCCCCTCAGAAAGCAAACTCAGCATCCTGGAGCTGCAGTTAGGAAGTCAAGTCAACCTGACGTGCCGAGCGTTCTTCGGCTTCGCCGGGGAAGTCAGTCCGCTCATCTactggatgaagggagagaagtTCATCGAAGACCTGGACGTGGAGAGGTTCAGAGAGAGTGACATcaaGCTTATCCGGGAGCACCTGGGAGAGCAGGAGGTGTCGATCACCCTGACCATTGACTCGGTGGAAGAGGCTGATCTAGGGAACTACTCTTGCTTCGTGGAGAATGGCAACGGCAGACGGCAGGCCAACATCCAGCTCACAAAGAGAGCAGAGCTTATGTACACAGTGGAGCTGGCGGGAGGCTTGGGGgccatcttgttgttgttgatctgcCTCGTGACCCTCTACAAGTGCTACAAGATGGAGCTCATGCTCTTCTACAGGAACCATTTTGGTAGCGAGGACATCGACGGAGATAATAAGGACTATGATGCCTATCTGTCATACACCAAAGTGGACCCGGACCAGTGGAGTCAGGAGACGCGTGAGGAAGAACGCTTCGCCCTGGAGATCCTACCCGACGTCCTGGAGAGGCATTATGGGTATAAACTGTTCATTCCAGACAGGGACTTGATCCCAACCGGAAGTTTCACCAATGATCATTTCCAGGACGATTCAAGACTCCTTAGAGcCTATATCGAGGACGTGGCGCGCTGTGTGGACCAATCCAAGCGCCTCATCATCGTCATGACACCCAATTATGTGGTGCGGCGGGGTTGGAGCATCTTCGAGCTGGAGACCCGCCTCCGGAACATGCTGGTCACCGGGGAGATCAAGGTGATTCTGATTGAGTGTGCCGAGCTGCATGGCATCATGAACTACCAGGAAGTGGAAGCGCTCAAACACACCATCAAGATGCTGACCGTCATCAAGTGGCGTGGCCCCAAGAGCAACAAGCTCAGCTCCAACTTCTGGAAACACTTGCAGTACGAGATGCCCTTCAAGCACATGGAGCCCATCATCAGCAATGAGCAGGTGCTGGACGTCAGTGAGCAGGGCCCTTTTGGCGAGCTCCAGACCGTCTCCGCCATCTCCATGGCAGCCGCCACCTCCACCGCCATGGCCACGGCGCACCCGGACTTGAGGAGCACCTTCCACAACTCCACTGTCAACTACCACACCCAGATGAGGCAGCAGAAACATTACTACCGCAGCTACGAGTACGACATGGCCCCCGGCGGcagcctgcctcccctctccaccctggGTAACCAGCACACCTACTGCAACATCCCTATGACTCTGATCAACGGACAGAGGCCCCACGGCCAGGCCAGGACACCCAGAGAACAGAGCATCGAGGAGGCACACGCCAATAACGCCATGCTACCGCTGCTGCCACGCGAGACCAGTATATCCAGTGTCATCTGGTGACAGCACCAGGCTGGCATAGGGACAGATGGGATATATTGTATGTAGAGGGAGAACTAGCTGGCagactgtgtggtggtggtggcggtggagGGGGTGTTGCTACGGAGACCGTTAGTGGACTAGAGACGGCTGCTGTGGAATTTGCACCAGGATTCACAGGGGGAAATCACCAACACAGGACACAAGTCATTCCGTCAGACTCAGACCACATTTGTTTGACAAGGACTAAGGAGGATTTGGCGTGAAAAGGAGAACCCGTTTGGTTTGAAATgcctgtacacacagacacaaacgccGATGTTCATTTACCCAGAAACTCAAGGAATACAGGGTCTtgtacatatattttatatttctttATAGCGTCAGTATTTTTCTCTTGTTTTTCTTTGACCTTTCATTCACCAGTTTTTATCATCAAATTTCTACGTCTGTTTTGATTTATGGTTTGAATTTGTTTGTATTTGGGTATGAAAGTGAAACGATGGTCTGTGAGGTCTGTTGGCTGAACTGTTGTAATTTTGAtctggacttgtagtg
>XM_036951894.1
TACCGGTCCACATAGTGACTGCGGTCTAGCGAGGGCAGGGGAATGAATCTGGTGTCTGGAAATGCACCACTAAATGCAAATTAACTGCAAGGCAAATAGTATTCAGACCTGTATTTATAGTTTCATATTTGGACTGTATGCACATCTGTTTTCTCCATCCACGGTATTTTTCCCCCGGTGCGTCTGTTGGTGCACGAGGACTCTGCGCGGGCTCTTGGACTTGGAGGACGGATCCATCAAACTCGGATTGTGAGTGTTCGCATAGCGGTACACTGAAGGAAAACCTAATCGGATGTGGTATTACAGAATACTTGTGAAATACAGCCTACATTATAGATAGCTCTCTGCCGCGCTGCAGCCTGTGAGGACCGCACGAGTTTTTTGGGTGGAGAAATTGTGTGTTTTGCAGCGGAGAGGTTTGGGGGACTATTTATAACCAAGGATCGGCAGTCTGGAATGTTTGATTTTCTCCTTCGTTATATGTCAACCTTTTTCTCCTATCAGAGTAGATTTCCCCACCGCCGGTCTTAATATTATTTTCAAATTGACCCTCTGCACCTTTTTTTATTCGGCACTGAAAAAAGCAGATGATATGCATATGTTCTTTGGATTAGACCCTGCTGTGGACAATTTGGCTTTTGCGTGAATGGGATATCTGTGTATTAGGCATATTGTTCAACGACCTTTGTATAAGGAGACGAGGCGTGTTATTAGCATTAGCCTACACCGGCATTGTGATGGTGAACTTTTATGATCGGAACTGACAGCGGAATAGGAACATTTTGGAAACTGCTTGTGGGACACTTGGCCAGGTGAAAAATGAAAGCTCCCATCACACTCCAGATTCTTCTCTATGCTGCTGTGGTCCGAGGTTTCAAAACAGTGTCCAAGAGAGGCTCAGtGGACGACTGCACGGATTGGTCAGTGGACTACTTGAAATACAAAGTGCTTTTGGGGGAACCGGTGCGGATTAAATGTGCTTTATTCTATGGATACATCAGAGCGAACTACACCCACTCCCAGAGTGTGGGACTAAGCCTTATGTGGTATAAAAGTACAGGACACGGAGACTTTGAGGAGCCTATCTCTTTCGACGGCATCAGAATGAACAAGGAGGAGGACGCTATCTGGTTTAGACCCACCGAGCTCCAAGACGTTGGACACTATTCCTGTGTATTGAGGAATTCCACATATTGTATGAAAGTGTCCATGTCACTGACAGTGGCAGAGAACGACACAGACCTCTGCTACAACTCCAAAATGAGGTACTTCGAGAAGGCAGagttaagtaaaagtaaagatatcacCTGTCCGGACATTGAGGATTATGTACAGCCGGGGAAGGAGCCAGAGATAGTATGGTACAAGGAATGCAAGCCAAAGCAGTGGAGACAAAGCATTGTAAGGAGAAGAGATACTCTATCTATCCGGGAGGTGCGTGAAGATGACATTGGAAATTACACGTGTGAATTACAGTTTGGCAGCTTCGTGGTGAGAAGAACTACAGAACTATCTGTTACAGCCCCTCTGACAGACAAGCCTCCAAAGATCCTGTTCCCCTCAGAAAGCAAACTCAGCATCCTGGAGCTGCAGTTAGGAAGTCAAGTCAACCTGACGTGCCGAGCGTTCTTCGGCTTCGCCGGGGAAGTCAGTCCGCTCATCTactggatgaagggagagaagtTCATCGAAGACCTGGACGTGGAGAGGTTCAGAGAGAGTGACATcaaGCTTATCCGGGAGCACCTGGGAGAGCAGGAGGTGTCGATCACCCTGACCATTGACTCGGTGGAAGAGGCTGATCTAGGGAACTACTCTTGCTTCGTGGAGAATGGCAACGGCAGACGGCAGGCCAACATCCAGCTCACAAAGAGAGCAGAGCTTATGTACACAGTGGAGCTGGCGGGAGGCTTGGGGgccatcttgttgttgttgatctgcCTCGTGACCCTCTACAAGTGCTACAAGATGGAGCTCATGCTCTTCTACAGGAACCATTTTGGTAGCGAGGACATCGACGGAGATAATAAGGACTATGATGCCTATCTGTCATACACCAAAGTGGACCCGGACCAGTGGAGTCAGGAGACGCGTGAGGAAGAACGCTTCGCCCTGGAGATCCTACCCGACGTCCTGGAGAGGCATTATGGGTATAAACTGTTCATTCCAGACAGGGACTTGATCCCAACCGGAAcCTATATCGAGGACGTGGCGCGCTGTGTGGACCAATCCAAGCGCCTCATCATCGTCATGACACCCAATTATGTGGTGCGGCGGGGTTGGAGCATCTTCGAGCTGGAGACCCGCCTCCGGAACATGCTGGTCACCGGGGAGATCAAGGTGATTCTGATTGAGTGTGCCGAGCTGCATGGCATCATGAACTACCAGGAAGTGGAAGCGCTCAAACACACCATCAAGATGCTGACCGTCATCAAGTGGCGTGGCCCCAAGAGCAACAAGCTCAGCTCCAACTTCTGGAAACACTTGCAGTACGAGATGCCCTTCAAGCACATGGAGCCCATCATCAGCAATGAGCAGGTGCTGGACGTCAGTGAGCAGGGCCCTTTTGGCGAGCTCCAGACCGTCTCCGCCATCTCCATGGCAGCCGCCACCTCCACCGCCATGGCCACGGCGCACCCGGACTTGAGGAGCACCTTCCACAACTCCACTGTCAACTACCACACCCAGATGAGGCAGCAGAAACATTACTACCGCAGCTACGAGTACGACATGGCCCCCGGCGGcagcctgcctcccctctccaccctggGTAACCAGCACACCTACTGCAACATCCCTATGACTCTGATCAACGGACAGAGGCCCCACGGCCAGGCCAGGACACCCAGAGAACAGAGCATCGAGGAGGCACACGCCAATAACGCCATGCTACCGCTGCTGCCACGCGAGACCAGTATATCCAGTGTCATCTGGTGACAGCACCAGGCTGGCATAGGGACAGATGGGATATATTGTATGTAGAGGGAGAACTAGCTGGCagactgtgtggtggtggtggcggtggagGGGGTGTTGCTACGGAGACCGTTAGTGGACTAGAGACGGCTGCTGTGGAATTTGCACCAGGATTCACAGGGGGAAATCACCAACACAGGACACAAGTCATTCCGTCAGACTCAGACCACATTTGTTTGACAAGGACTAAGGAGGATTTGGCGTGAAAAGGAGAACCCGTTTGGTTTGAAATgcctgtacacacagacacaaacgccGATGTTCATTTACCCAGAAACTCAAGGAATACAGGGTCTtgtacatatattttatatttctttATAGCGTCAGTATTTTTCTCTTGTTTTTCTTTGACCTTTCATTCACCAGTTTTTATCATCAAATTTCTACGTCTGTTTTGATTTATGGTTTGAATTTGTTTGTATTTGGGTATGAAAGTGAAACGATGGTCTGTGAGGTCTGTTGGCTGAACTGTTGTAATTTTGAtctggacttgtagtg

Function

NR:

description
PREDICTED: interleukin-1 receptor accessory protein-like 1 isoform X2

GO: NA

KEGG:

id description
K05170 IL1RAPL, IL1R8_9; interleukin 1 receptor accessory protein-like

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951893.1 False 3522 mRNA 0.49 12 14087058 14485956
XM_036951894.1 True 3477 mRNA 0.49 11 14087058 14485956

Neighbor

gene id symbol gene type direction distance location
LOC110495485 LOC106575653 coding upstream 107171 13975110 ~ 13979887 (+)
LOC110495487 LOC106574771 coding upstream 117869 13883956 ~ 13969189 (+)
LOC118941229 NA coding upstream 275770 13811236 ~ 13811288 (+)
LOC110495495 LOC106574775 coding upstream 464240 13592980 ~ 13622818 (+)
LOC110497006 LOC106574795 coding upstream 530706 13520158 ~ 13556352 (+)
LOC110495481 LOC106574739 coding downstream 71020 14556326 ~ 14558589 (+)
LOC110495476 LOC106575616 coding downstream 102695 14588651 ~ 14643860 (+)
LOC110495457 LOC106573985 coding downstream 267480 14753436 ~ 14764586 (+)
LOC110496915 LOC106575634 coding downstream 293134 14779090 ~ 14780827 (+)
zgc:92380 LOC106575639 coding downstream 306981 14792937 ~ 14799311 (+)
G1518993 NA non-coding upstream 114095 13972760 ~ 13972963 (+)
G1518612 NA non-coding upstream 114640 13971588 ~ 13972418 (+)
G1518614 NA non-coding upstream 116168 13970547 ~ 13970890 (+)
G1518613 NA non-coding upstream 117301 13969305 ~ 13969757 (+)
G1518557 LOC106575650 non-coding upstream 280365 13803381 ~ 13806693 (+)
G1519303 NA non-coding downstream 1536 14487492 ~ 14487872 (+)
G1519095 NA non-coding downstream 4506 14490462 ~ 14492116 (+)
G1519304 NA non-coding downstream 7923 14493879 ~ 14494081 (+)
G1519534 NA non-coding downstream 9554 14495510 ~ 14495716 (+)
G1519537 NA non-coding downstream 12312 14498268 ~ 14498607 (+)
G1517545 NA other upstream 898978 13187101 ~ 13188080 (+)
G1517457 NA other upstream 1144564 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 1150780 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 1214895 12833651 ~ 12872163 (+)
G1517150 NA other upstream 2145953 11940062 ~ 11941897 (+)
G1519538 NA other downstream 12830 14498786 ~ 14499137 (+)
G1519733 NA other downstream 328026 14813982 ~ 14814886 (+)
il8r il8r other downstream 412300 14898154 ~ 14901354 (+)
LOC110495440 LOC106575601 other downstream 723013 15207355 ~ 15251952 (+)

Expression


Co-expression Network