LOC110495457 (LOC106573985)


Basic Information

Item Value
gene id LOC110495457
gene name LOC106573985
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14753436 ~ 14764586 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021570729.2
TATCAAATGTTTTATTGACGTAATAACGGAGTGCCCAGAGACTTCCGGAGACTTTCACACATGTGAAAAAAACATGGGGACACTATTTAGATGTTTTTCTCTATAGCTCGTATTTGTTCTTCGGTCAGCACCAAGAAATAACAATCTTTAGCGTTTTCTGTGATTGACTTAACATATTTTCTTAACCTGTTTTCAACATTTGTCGCGTTAGCAAACTTTTCAGCTCTCAAGTTAGGCAGCTAATTTAAGTTAGCCACCTTGGTAACATCTAGCTAGCTATCATGGATTACTCGGACGAAAATTCGGTACAATTCCACGGGGATGAAGAGATTATAGAAGTCATCGACCTTAACGAAACAGAGCAAAACCCAGATGATTTGGCGGATGAGTTCGAGGACGTGGACGTCGGAGAGACTGAGGACGGAGACGATGAACAGGAAGACTGGGATACCGACGACGAGATGGAGCAGGAAAAGGAGCAAGATGACAGCGAACTCACCTTTTCCAAACACACAGGCTCCGTGTTCTGTGTGAGTCTGGACCCAGCCACAAACAGCTTGGCTGTGACCGGAGGAGAGGATGACAAGGCCTATGTCTGGAGAGTGAGTGATGgggaagtgctgtttgaatgtaCAGGCCATAAGGACTCCGTGACAAGTGTTTTATTCAGCCATGATTCTTCCCTGGTGGCCACGGGGGACATGAGCGGGCTGatcaaggtctggaaggtggagACCAAGCAGGAGGTGTGGTCCTTCGAGGTGGGAGACCTGGAGtggatGGAGTGGCACCCCTGCGCCCCGGTGCTGCTGGCGGGCATGGCGGACGGTAACGTTTGGATGTGGAAGATCCCAGGGGGTGACTGTAAGACCCTGCAGGGCCCTGGTTGCCAGTCGACCAGTGGAAAGGTCCTGCCAGACGGGAAGAGAGCTGTGGTGGGCTATGAAGATGGCAACGTACGACTTTGGGACCTCAAGCAGGGAAATGCCACCCATGTGATTAAAGGTCATGATGGACACCAGGGGGCGCTGACGTGCCTGGCCTGTAACAAGGACGGCTCTCTGGTGCTGACGGGCTCCGTGGACGGCCGTGCCAAGCTCATCAACACTGCCACTGGCAAGTCTGCTGTCTCCGGCTCCACACCTACCCCCGCCCTGCCAGGTGGGAAGTCTGTGACAAAGAAGCGGAGGTGGGGAAGAGCGAAACCTGCAATCGGAGAGGAGGAGGGTCGTTGGCACTCTGTGCTGGAGGAGGATGTGTTGCCTACACCTCCAGTATTCAGACCAATAAGGCCATCAGGACCTCAGCTGGACATGACCTCTAAGTACAGCCCCATGCAACTTTTTCAGCTGTTTTTCACCTCGGCAGTTGTTGATTCCCTGGTGTCGAACACAAATAAGTATGGTGCTAAGAAGCAGGCAGGcaagaaagagggatggaagcCCATTTCCATGTCAGATCTTTTTTGTTTCATGTCAATGGTCATGTACATGGGTCTTGTGAAGCTAAAAACCCTGAAAGACTACTGGAAAACTGCTCCCCTCTATCAACTGCCTTTCCCCTCCACTGTCATATCATGCAAAAGGTTTCTGACAATCTCACGGGCGCTTCATAtcagtgacccagaagttgaTGAGGACAATGAGAAGATGAGAAGCACAGCAAGGTTTGATAGGCTGTGCAAAATAAAACCTCTCTACCCCAGCATCGTTGAGGCTTGCAAAACCTATTTTCAGCCTGCCCAGAACGTTTCCAtcgatgagaggatggtagcTTCAAAGGCCAGAATTGGCCTAAAACAATACATGCGTAACAAACCAACTAAATGGGGTTACAAGctgtttgttttggctgattctGTGTGTGCATACACGTGTAATTTATTTGTTTATGAGGGGAAGAGCAGTGTTGCGACCGGTAAGGGATTAGCTATGACTCTGTTATGCAGTTATTAGATTTTCAACTGCTggggaagggctacaaactgtttgtggaCAACTTTTAAACAAGCCCTACCCTGTTTGCAGACCTGAGGAAGCGGGATGtgtgggcttgtggcaccattcggACCAACAGAGTGGGCTTTCCAAAGACAAAGGTGAACGACATGCCTAAGCGATGGATCCGTGAAGATGGCCTGCTCTTTGTGAAGTGGATGGATACCAGAGAGGTGGTCATGTGCTCCActatccacaagtccttcagtggcGATCATGTCGTCAGGCGTGTGAAGGACGCTACAGGGGCATGGACCacaaaaaatgtccccattcctgCAGCCAtcaaggactacaacaagagcatgggaggtgtggacctgtcagatgcACTGATTGGCTACTACAATGTTCTCCACAAGGcaatgaaatggtacaagacatttttctatcatttcattgacattgctgtggtgaatgccttcatcctccagaaggaaatggctaagagctgtggacagccccccatctcacagctagccttcagggagctgctcatccatgtcctctacctctgtcccttctacccctgtcccctctacctctgtcccttctgctccaaccAGTTGTGTTCACCTGCCCCAGATTCATCTCTGCAGGCATGATTGTGCCTCGGGGCAAAAAGGGCACAGTAGGGAGacgtcgttgtgttctgtgtcacaggaaatgccccatcacctgcaccagcTGTTCAGtaaccctctgctttacagcagaaagagagtgCTATTGGGCATGGCATCAGAAACACAATATtttgtagaggactgagggtcttcacaatattgtacattatacattgaatgtgtgtaaatagttacccttgttattttacattttttct
>XM_021570731.2
TATCAAATGTTTTATTGACGTAATAACGGAGTGCCCAGAGACTTCCGGAGACTTTCACACATGTGAAAAAAACATGGGGACACTATTTAGATGTTTTTCTCTATAGCTCGTATTTGTTCTTCGGTCAGCACCAAGAAATAACAATCTTTAGCGTTTTCTGTGATTGACTTAACATATTTTCTTAACCTGTTTTCAACATTTGTCGCGTTAGCAAACTTTTCAGCTCTCAAGTTAGGCAGCTAATTTAAGTTAGCCACCTTGGTAACATCTAGCTAGCTATCATGGATTACTCGGACGAAAATTCGGTACAATTCCACGGGGATGAAGAGATTATAGAAGTCATCGACCTTAACGAAACAGAGCAAAACCCAGATGATTTGGCGGATGAGTTCGAGGACGTGGACGTCGGAGAGACTGAGGACGGAGACGATGAACAGGAAGACTGGGATACCGACGACGAGATGGAGCAGGAAAAGGAGCAAGATGACAGCGAACTCACCTTTTCCAAACACACAGGCTCCGTGTTCTGTGTGAGTCTGGACCCAGCCACAAACAGCTTGGCTGTGACCGGAGGAGAGGATGACAAGGCCTATGTCTGGAGAGTGAGTGATGgggaagtgctgtttgaatgtaCAGGCCATAAGGACTCCGTGACAAGTGTTTTATTCAGCCATGATTCTTCCCTGGTGGCCACGGGGGACATGAGCGGGCTGatcaaggtctggaaggtggagACCAAGCAGGAGGTGTGGTCCTTCGAGGTGGGAGACCTGGAGtggatGGAGTGGCACCCCTGCGCCCCGGTGCTGCTGGCGGGCATGGCGGACGGTAACGTTTGGATGTGGAAGATCCCAGGGGGTGACTGTAAGACCCTGCAGGGCCCTGGTTGCCAGTCGACCAGTGGAAAGGTCCTGCCAGACGGGAAGAGAGCTGTGGTGGGCTATGAAGATGGCAACGTACGACTTTGGGACCTCAAGCAGGGAAATGCCACCCATGTGATTAAAGGTCATGATGGACACCAGGGGGCGCTGACGTGCCTGGCCTGTAACAAGGACGGCTCTCTGGTGCTGACGGGCTCCGTGGACGGCCGTGCCAAGCTCATCAACACTGCCACTGGCAAGGTGTTGGGTGTGTTCTCTGTGGACGAGGGCAAAGCCAAAGCCTCTCAGGAGGATGCTGAGGAGACCAACTCGGTGGAGTCAGTGGGGTTCTGCAATGTGTTGCCTCTGATAGCGGTGGCGTATCTGCATGGGACCCTGGCTATCTATGACCTCTCCTCACAGGTCCTCAGACACAAGTGTCAGCACCAGgctggcATTGTTAAACTGCAGTGGGAGGAGTCATCCTCTGTGGTGTCCACCTGTAGTCTGGACGGGGCGGTGAGGCTGTGGGATGCCCGCTCGGGAACCATGGTGTCAGAGTACCGTGGCCACCAGGCGGAGATCCTCGACTTCACACttaacagaGAAGCCTCTATGGCGGTCACTGTCTCTGGAGACCACCGGGCCAAAGTCTTCTGCCTCCAACGACCAGACCGTTAAtaagaggagcagagggagaaagagcgagagaaatggGGATGGACTCAACCCCGATCGCGCTTTGTCGACAATGCAccttaaaggcaatgttcccgttTTTGTGGAGACCGTTTTAACGGTGGACACTGCATATATCGTCTCAATCCGAAGTTGTCCTTTAAATGGCGCATTGTCAACAAAGTGCGAtcggattgaatcccagcctttCATTGTGTTTTCTCACAACTGAGGGTTTTTGAAGTGTCTTGTATCGATTGTGGTCTGTCTGATCTATAGTAGACCTGCAGTGTTCTAGAATTGCCAGCCATTCTACTCAGGTTTCTCAAGTAGAACCCACACAAAATATATGTATTCTAAGTGGTGTGGTAGTGTAGATGTTGGAACACGTCATCCTAGAGGCAATACGTTGTGTGGTCCTTGATTTATTACTAAATACACTTACATCATCACTGACCTTGGTGTTCCCTGTGCGATTTGGATTGATGACAATTACGAATACACATTAAGGTAATAGAGCTACGTAGAGATGGAGATCTCGATGATGTCCCCATCATTTCTGGTGATTTGTGGAGTGTAATCCTCACTTTCCCCCTAAATCACCCCAAATTATGTCAACTCAACCTTATGTAAATATATTGGGCCCTGTTGAAATACTTTAGAAATGAATCCGTCCTTTCTTTTCTGAAGTAATCACGAATCTGGATTGGTGGAAATAATGTGCTAACTTTGCTTGCCCCTACCCCATCACTGACCTTAAGGAAACATGGAAGGAAGGGTGCATCTCTGAAGTATTGGGACAGAGCCATGGGCTTTGTTCTGCTGTTTGTTGGAACCATTAAAGATGTTTTCAACCCAA

Function

NR:

description
angio-associated migratory cell protein-like isoform X2

GO: NA

KEGG:

id description
K24725 AAMP; angio-associated migratory cell protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021570729.2 False 2841 mRNA 0.49 8 14753436 14760689
XM_021570731.2 True 2397 mRNA 0.49 11 14753436 14764586

Neighbor

gene id symbol gene type direction distance location
LOC110495476 LOC106575616 coding upstream 109576 14588651 ~ 14643860 (+)
LOC110495481 LOC106574739 coding upstream 194847 14556326 ~ 14558589 (+)
LOC110495483 LOC106575569 coding upstream 267480 14087058 ~ 14485956 (+)
LOC110495485 LOC106575653 coding upstream 773549 13975110 ~ 13979887 (+)
LOC110495487 LOC106574771 coding upstream 784247 13883956 ~ 13969189 (+)
LOC110496915 LOC106575634 coding downstream 14504 14779090 ~ 14780827 (+)
zgc:92380 LOC106575639 coding downstream 28351 14792937 ~ 14799311 (+)
LOC110495453 il8r coding downstream 70808 14835394 ~ 14842885 (+)
LOC118941101 il8r coding downstream 94136 14858722 ~ 14861844 (+)
LOC118936566 il8r coding downstream 113106 14877692 ~ 14880867 (+)
G1519654 NA non-coding upstream 77731 14672239 ~ 14675705 (+)
G1519579 NA non-coding upstream 221599 14530073 ~ 14531837 (+)
G1519578 NA non-coding upstream 223726 14529089 ~ 14529710 (+)
G1519562 NA non-coding upstream 225644 14527578 ~ 14527792 (+)
G1519738 NA non-coding downstream 67573 14832159 ~ 14832358 (+)
G1519750 NA non-coding downstream 128866 14893452 ~ 14897145 (+)
G1519759 NA non-coding downstream 144905 14909491 ~ 14909694 (+)
G1519751 NA non-coding downstream 147010 14911596 ~ 14921517 (+)
G1519752 NA non-coding downstream 154119 14918705 ~ 14919404 (+)
G1519538 NA other upstream 254299 14498786 ~ 14499137 (+)
G1519096 NA other upstream 317316 14434762 ~ 14436120 (+)
G1517545 NA other upstream 1565356 13187101 ~ 13188080 (+)
G1517457 NA other upstream 1810942 12937523 ~ 12942494 (+)
G1519733 NA other downstream 49396 14813982 ~ 14814886 (+)
il8r il8r other downstream 133670 14898154 ~ 14901354 (+)
LOC110495440 LOC106575601 other downstream 444383 15207355 ~ 15251952 (+)
G1520649 NA other downstream 991907 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 1031766 15796262 ~ 15801788 (+)

Expression


Co-expression Network