LOC110495453 (il8r)


Basic Information

Item Value
gene id LOC110495453
gene name il8r
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14835394 ~ 14842885 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021570722.2
ATCACTGTAGGATGTCTTTAAGTGAAGATGTCTCAACAAAGACAAGGGCATCAGAAGTTAAAGGctagtctttctctgtctgtctctatcttacCATATTATATTTAGTAATGTGCTCTCAGATCCACCAACAGCTGACAGAAAAAGAAACTGCCTAAAAAGTTCCAAACTGCTGTCAAACATTCTCTTTTTAACAATTCAATGAACAAGTGGAGTCTATGACTTTCATTTCTAATCATTGAGGAAGCAGAATTTGAGGCTGACAAATGACTCAAGTGCAGTGACACAACATTGTTCTCTTAATTAACAGGATATCTCCACACTTCCATCCCAGCTGTGATGTCTTTAAAACAGTGGCAACTCCCTCTTCATTATCATAGAACTGGATGCAAAGATGACAGAGGTCCTGGACTATGATTATAAATCAGACTATGACTATAAATCAGCCAATGACTCCTATTACTTCAACATCACCTCCTTTGACCTGAACTTTAACACATTGTCCTGTGCAGCTCAGCCCCTTTCTCCCGGTGCCGTCATATTCCTGTGTGTCCTTCACGTCGCCATCTTCCTATTGGCTGTTCCTGGTAACCTACTTGTGGGGCTCGTGATTGGCTTCAGTCAACAGTCCCTGACCCCATCCGACGTCTACCTGTTTCACCTGACTGTAGCTGACGGGCTGCTGGCTCTGACCCTGCCCTTCTGGGCTGCTAACACGCTCCACGGCTGGATCTTTGGTGACTTCCTGTGTAAGTTCCTCAGCCTGGTTATGGAGGCTAGCTTCTACACCAGCATCCTGTTCCTGGTGTGTATCAGTGTCGACCGCTACCTGGTGATCGTTCGCCCTGCCAAGTCCCGAAAGGGCCGCCGAAGGGCCTGCAGATGGTACGCCTGCACCTTCATCTGGACTCTGGGGggcgccctctctctccctgccctcttcAACGACGCCTTCACGCCCCAGAGAGGTGGTCCGACGAGGTGTGCTGAGCACTTCGACGTCAGCAGCGCCACCCACTGGCGGCTCGCTACTCGCGGCCTACGCCACATCCTAGGGTTCCTGCTCCCACTAGTCATCATGGTGGCGTGCTACAGCATCACTGTGGCCCGGTTGCTGCAGACGCGCGGCTTCCAGAAGCACAGGGCCATGCGGGTCATCATTGCCGTGGTGTTCGCCTTCTTCCTGTGCTGGACGCCGTTACACATGACGGTGATGGCCGACACCCTGATGAGGGCCAAGTTGGTGCGCTTCGACTGTGCTGTGAGGAACAGGGTGGACCTGGCCCTCCAGGTCACCCACAGCCTGGCCCTGGTCCACAGCTTTGTTAACCCAGTGCTGTATGCCTTCGTGGGGGAGAAGTTCAGGGGGAACCTGGGTGCCCTGGTCAGGAAGTCACGAGGACCAGAGAGGGGGTCGTCGTCTCGATTTAGCAGGTCCACATCCCAGACCTCAGAAGGGAATGGACTGTTATGATTGATCTGACAGGTTGTCCCCACATTACTTtgaatcagggttggggtcaattccatttcaattccactCAATTCAGGAAGCACTCTAAAATTCAAATTccaatgcttttcaatgaggacattttttaaatcaaaatttGGTTCACTTTCTGaactgactggaattgaaatggaattaatTCCAAACCTGCTTTGAATAATGTATAAGATTGTCCCTTTGTAACGTATTGTAACCTAACATTCCTTGCCTGACATTGAATATGTGCTGGCACTATCAGGCTGCAGACTCAGATCCTGTATGTATGTGATCTTTAATGTCCCTCCATATACTAATGCCCCTGGTGTCTGTACATGTATATAATGCCCTCTGTTGTCTGTTGTATTAGGTAATAAATACCCTGTACTGTT

Function

NR:

description
C-X-C chemokine receptor type 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021570722.2 True 1881 mRNA 0.49 2 14835394 14842885

Neighbor

gene id symbol gene type direction distance location
zgc:92380 LOC106575639 coding upstream 36083 14792937 ~ 14799311 (+)
LOC110496915 LOC106575634 coding upstream 54567 14779090 ~ 14780827 (+)
LOC110495457 LOC106573985 coding upstream 70808 14753436 ~ 14764586 (+)
LOC110495476 LOC106575616 coding upstream 191534 14588651 ~ 14643860 (+)
LOC110495481 LOC106574739 coding upstream 276805 14556326 ~ 14558589 (+)
LOC118941101 il8r coding downstream 15837 14858722 ~ 14861844 (+)
LOC118936566 il8r coding downstream 34807 14877692 ~ 14880867 (+)
il8r il8r coding downstream 55269 14898154 ~ 14901354 (+)
LOC110495438 tns1 coding downstream 65069 14907954 ~ 15133334 (+)
LOC110495435 LOC100194500 coding downstream 333516 15176401 ~ 15186345 (+)
G1519738 NA non-coding upstream 3036 14832159 ~ 14832358 (+)
G1519654 NA non-coding upstream 159689 14672239 ~ 14675705 (+)
G1519579 NA non-coding upstream 303557 14530073 ~ 14531837 (+)
G1519578 NA non-coding upstream 305684 14529089 ~ 14529710 (+)
G1519750 NA non-coding downstream 50567 14893452 ~ 14897145 (+)
G1519759 NA non-coding downstream 66606 14909491 ~ 14909694 (+)
G1519751 NA non-coding downstream 68711 14911596 ~ 14921517 (+)
G1519752 NA non-coding downstream 75820 14918705 ~ 14919404 (+)
G1519766 NA non-coding downstream 87942 14930827 ~ 14931038 (+)
G1519733 NA other upstream 20508 14813982 ~ 14814886 (+)
G1519538 NA other upstream 336257 14498786 ~ 14499137 (+)
G1519096 NA other upstream 399274 14434762 ~ 14436120 (+)
G1517545 NA other upstream 1647314 13187101 ~ 13188080 (+)
LOC110495440 LOC106575601 other downstream 366084 15207355 ~ 15251952 (+)
G1520649 NA other downstream 913608 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 953467 15796262 ~ 15801788 (+)
G1520742 NA other downstream 1076272 15919157 ~ 15922899 (+)

Expression


Co-expression Network