LOC118941101 (il8r)


Basic Information

Item Value
gene id LOC118941101
gene name il8r
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14858722 ~ 14861844 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951919.1
gtcattcagccacgattccgtgaaacagaggaTATGACAGTTTTTGAAgacccgttggtaggatattcgtgattgtacttcgtctaatttattgtccaatgattgcacgttggtgaGTAGTATTAACGGtgacggcagctttcccactcgccttatccgggtcctgaccaggcatccggttctttgtcctctgtaccagcgtcgcttcctcttgcaaataacgggggTGTTAGGAGAATGTCTTGTGCGCCCTCCTTGTAGAAAAAATATTTGTCTAACcagaggtgagtgatcgctgtcctgatatccagaagctcttcgTGTAATcagagGATGTCTTGACACTTCCATCCCAGCTGTGATGTCTTTAAAACAGTGGCAATTCTCTCTTCATTATCATAGAGCTGGATGCAAAGATGACAGAGGTCCTGGACTATGATTATAAATCAGACTATGACTATAAATCAGCCAATGACTCCTATTACTTCAACATCACCTCCTTTGACCTGAACTTTAACACATTGTCCTGTGCAGCTCAGCCCCTTTCTCCCGGTGCCGTCATATTCCTGTGTGTCCTTCACGTCGCCATCTTCCTATTGGCTGTTCTTGGTAACCTACTTGTGGGGCTCGTGATTGGCTTCAGTCAACAGTCCCTGACCCCATCCGACGTCTACCTGTTTCACCTGACTGTAGCTGACGGGCTGCTGGCTCTGACCCTGCCCTTCTGGGCTGCTAACACGCTCCACGGCTGGATCTTTGGTGACTTCCTGTGTAAGTTCCTCAGCCTGGTTATGGAGGCTAGCTTCTACACCAGCATCCTGTTCCTGGTGTGTATCAGTGTCGACCGCTACCTGGTGATCGTTCGCCCAGCCAAGTCCCGTAAGGGCCACCGAAGGGCCTGCAGATGGTACGCCTGCACCTTCATCTGGACTCTGGGGggcgccctctctctccctgccctcttcAACAACGCTTTCACGCCCCAGAGAGGTGGTCCGACGAGGTGTGCTGAGCACTTCGACGTCAGCAGCGCCACCCACTGGCGGCTCGCTACTCGCGGCCTACGCCACATCCTAGGGTTCCTGCTCCCACTAGTCATCATGGTGGCGTTCTACAGCATCACCGTGGCCCGGTTGCTGCAGACGCACGGCTTCCAGAAGCACAGGGCCATGCGGGTCATCATTGCCGTGGTGTTCGCCTTCTTCCTGTGCTGGACGCCGTTACACATGACGGTGATGGCCGACACCCTGATGAGGGCCAAGTTGGTGCGCTTCGACTGTGCTGTGAGGAACAGGGTGGACCTGGCCCTCCAGGTCACCCACAGCCTGGCCCTGGTCCACAGCTTTGTTAACCCAGTGCTGTATGCCTTCGTGGGGGAGAAGTTCAGGGGGAACCTGGGTGCCCTGGTCAGGAAGTCACGAGGACCAGAGAGGGGGTCGTCGTCTCGATTTAGCAGGTCCACATCCCAGACCTCAGAAGGGAATGGACTGTTATGATTGATCTGACAGGTTGTCCCCACATTACTTtgaatcagggttggggtcaattccatttcaattccactCAATTCAGGAAGCACTCTAAAATTCAAATTccaatgcttttcaatgaggacattttttaaatcaaaatttGGTTCACTTTCTGaactgactggaattgaaattgaattaacTCCAACCCTGCTTTGAATAACGTATAAGATTGTCCCTTTGTAACGTATTGTAACCTAACATTCCTTGCCTGACATTGAATATGTGCTGGCACTATCAGGCTGCAGACTCAGATCCTGTATGTATGTGATCTTTAATGTCCCTCCATATACTAATGCCCCTGGTGTCTGTACATGTATATAATGCCCTCTGTTGTCTGTTGTATTAGGTAATAAATACCCTGTACTGTT

Function

NR:

description
interleukin 8 receptor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951919.1 True 1903 mRNA 0.51 3 14858722 14861844

Neighbor

gene id symbol gene type direction distance location
LOC110495453 il8r coding upstream 15837 14835394 ~ 14842885 (+)
zgc:92380 LOC106575639 coding upstream 59411 14792937 ~ 14799311 (+)
LOC110496915 LOC106575634 coding upstream 77895 14779090 ~ 14780827 (+)
LOC110495457 LOC106573985 coding upstream 94136 14753436 ~ 14764586 (+)
LOC110495476 LOC106575616 coding upstream 214862 14588651 ~ 14643860 (+)
LOC118936566 il8r coding downstream 15848 14877692 ~ 14880867 (+)
il8r il8r coding downstream 36310 14898154 ~ 14901354 (+)
LOC110495438 tns1 coding downstream 46110 14907954 ~ 15133334 (+)
LOC110495435 LOC100194500 coding downstream 314557 15176401 ~ 15186345 (+)
LOC110495440 LOC106575601 coding downstream 345511 15207355 ~ 15251952 (+)
G1519738 NA non-coding upstream 26364 14832159 ~ 14832358 (+)
G1519654 NA non-coding upstream 183017 14672239 ~ 14675705 (+)
LOC110495481 LOC106574739 non-coding upstream 301599 14556326 ~ 14558589 (+)
G1519579 NA non-coding upstream 326885 14530073 ~ 14531837 (+)
G1519578 NA non-coding upstream 329012 14529089 ~ 14529710 (+)
G1519750 NA non-coding downstream 31608 14893452 ~ 14897145 (+)
G1519759 NA non-coding downstream 47647 14909491 ~ 14909694 (+)
G1519751 NA non-coding downstream 49752 14911596 ~ 14921517 (+)
G1519752 NA non-coding downstream 56861 14918705 ~ 14919404 (+)
G1519766 NA non-coding downstream 68983 14930827 ~ 14931038 (+)
G1519733 NA other upstream 43836 14813982 ~ 14814886 (+)
G1519538 NA other upstream 359585 14498786 ~ 14499137 (+)
G1519096 NA other upstream 422602 14434762 ~ 14436120 (+)
G1517545 NA other upstream 1670642 13187101 ~ 13188080 (+)
G1520649 NA other downstream 894649 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 934508 15796262 ~ 15801788 (+)
G1520742 NA other downstream 1057313 15919157 ~ 15922899 (+)

Expression


Co-expression Network