il8r (il8r)


Basic Information

Item Value
gene id il8r
gene name il8r
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14898154 ~ 14901354 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951026.1
ccccccccccccaccccgtctTACGTCTATCTTGCCAGTTTAGAGTATATcctgctagctgaatatccatgtcgtcattcagccacgattccgtgaaacagaggaTATGACAGTTTTTGAAgacccgttggtaggatattcgtgattgtacttcgtctaatttattgtccaatgattgcacgttggtgaGTAGTATTAACGGTGACGggagctttcccactcgccttatccgggtcctgaccaggcatccggttctttgtcctctgtaccagcgtcgcttcctcttgcaaataacgggggTGTTAGGAGAATGTCTTGTGCGCCCTCCTTGTAGAAAAAATATTTGTCTAACcagaggtgagtgatcgctgtcctgatatccagaagctcttcgTGTAATcagagGATGTCTTGACACTTCCATCCCAGCTGTGATGTCTTTAAAACAGTGGCAATTCTCTCTTCATTATCATAGAGCTGGATGCAAAGATGACAGCTCAGCCCCTTTCTCCCGGTGCCGTCATATTCCTGTGTGTCCTTCACGTCGCCATCTTCCTATTGGCTGTTCCTGGTAACCTACTTGTGGGGCTCGTGATTGGCTTCAGTCAACAGTCCCTGACCCCATCCGACGTCTACCTGTTTCACCTGACTGTAGCTGACGGGCTGCTGGCTCTGACCCTGCCCTTCTGGGCTGCTAACACGCTCCACGGCTGGATCTTTGGTGACTTCCTGTGTAAGTTCCTCAGCCTGGTTATGGAGGCTAGCTTCTACACCAGCATCCTGTTCCTGGTGTGTATCAGTGTCGACCGCTACCTGGTGATCGTTCGCCCAGCCAAGTCCCGTAAGGGCCACCGAAGGGCTTGCAGATGGTACGCCTGCACCTTCATCTGGACTCTGGGGggcgccctctctctccctgccctcttcAACGACGCTTTCACGCCCCAGAGAGGTGGTCCGACGAGGTGTGCTGAGCACTTTGACCTCAGCAGCGCCACCCACTGGCGGCTCGCTACTCGCGGCCTACGCCACATCCTAGGGTTCCTGCTCCCACTAGTCATCATGGTGGCGTGCTACAGCATCACCGTGGCCCGGTTGCTGCAGACGCACGGCTTCCAGAAGCACAGGGCCATGCGGGTCATCATTGCCGTGGTGTTCGCCTTCCTCCTGTGCTGGACGCCGTTACACATGACGGTGATGGCCGACACCCTGATGAGGGCCAAGCTGGTGCGCTTCGACTGTGCTGTGAGGAACAGGGTGGACCTGGCCCTCCAGGTCACCCACAGCCTGGCCCTGGTCCACAGCTTTGTTAACCCAGTGCTGTATGCCTTCGTGGGGGAGAAGTTCAGGGGGAACCTGGGTGCCCTGGTCAGGAAGTCACGGGGACCAGAGAGGGGGTCTTCGTCCGGATTTAGTAGGTCCACATCCCAGACCTCAGAAGGGAATGGACTGTTATGATTGATCTGACAGGTTGTCCCCACATTACTTTGAATCAGGGTTGGGgtccattccatttcaattccactCAATTCAGGAAGCACTCTAAAATTCAAATTccaatgcttttcaatgaggacATTTTTTAAATCGAAATTTGGTTCACTTTCTGaactgactggaattgaaattgaattaacTCCAACCCTGCTTTGAATAACGTATAAGATTGTCCCTTTGTAACGTATTGTAACCTAACATTCCTTGCCTGACATTGAATATGTGCTGGCACTATCAGGCTGCAGACTCAGATCCTGTATGTATGTGATCTTTAATGTCCCTCCATATACTAATGCCCCTGGTGTCTGTACATGTATATAATGCCCTCTGTTGTCTGTTGTATTAGGTAATAAATACCCTGTACTGTT
>NM_001124279.1
cgggggTGTTAGGAGAATGTCTTGTGCGCCCTCCTTGTAGAAAAAATATTTGTCTAACcagaggtgagtgatcgctgtcctgatatccagaagctcttcgTGTAATcagagGATGTCTTGACACTTCCATCCCAGCTGTGATGTCTTTAAAACAGTGGCAATTCTCTCTTCATTATCATAGAGCTGGATGCAAAGATGACAGAGGTCCTGGACTATGATTATAAATCAGACTATGACTATAAATCAGCCAATGACTCCTATTACTTCAACATCACCTCCTTTGACCTGAACTTTAACACATTATCCTGTGCAGCTCAGCCCCTTTCTCCCGGTGCCGTCATATTCCTGTGTGTCCTTCACGTCGCCATCTTCCTATTGGCTGTTCCTGGTAACCTACTTGTGGGGCTCGTGATTGGCTTCAGTCAACAGTCCCTGACCCCATCCGACGTCTACCTGTTTCACCTGACTGTAGCTGACGGGCTGCTGGCTCTGACCCTGCCCTTCTGGGCTGCTAACACGCTCCACGGCTGGATCTTTGGTGACTTCCTGTGTAAGTTCCTCAGCCTGGTTATGGAGGCTAGCTTCTACACCAGCATCCTGTTCCTGGTGTGTATCAGTGTCGACCGCTACCTGGTGATCGTTCGCCCAGCCAAGTCCCGTAAGGGCCACCGAAGGGCTTGCAGATGGTACGCCTGCACCTTCATCTGGACTCTGGGGggcgccctctctctccctgccctcttcAACGACGCTTTCACGCCCCAGAGAGGTGGTCCGACGAGGTGTGCTGAGCACTTTGACCTCAGCAGCGCCACCCACTGGCGGCTCGCTACTCGCGGCCTACGCCACATCCTAGGGTTCCTGCTCCCACTAGTCATCATGGTGGCGTGCTACAGCATCACCGTGGCCCGGTTGCTGCAGACGCACGGCTTCCAGAAGCACAGGGCCATGCGGGTCATCATTGCCGTGGTGTTCGCCTTCCTCCTGTGCTGGACGCCGTTACACATGACGGTGATGGCCGACACCCTGATGAGGGCCAAGCTGGTGCGCTTCGACTGTGCTGTGAGGAACAGGGTGGACCTGGCCCTCCAGGTCACCCACAGCCTGGCCCTGGTCCACAGCTTTGTTAACCCAGTGCTGTATGCCTTCGTGGGGGAGAAGTTCAGGGGGAACCTGGGTGCCCTGGTCAGGAAGTCACGGGGACCAGAGAGGGGGTCTTCGTCCGGATTTAGTAGGTCCACATCCCAGACCTCAGAAGGGAATGGACTGTTATGATTGATCTGACAGGTTGTCCCCACATTACTTTGAATCAGGGTTGGGgtccattccatttcaattccactCAATTCAGGAAGCACTCTAAAATTCAAATTccaatgcttttcaatgaggacATTTTTTAAATCGAAATTTGGTTCACTTTCTGaactgactggaattgaaattgaattaacTCCAACCCTGCTTTGAATAACGTATAAGATTGTCCCTTTGTAACGTATTGTAACCTAACATTCCTTGCCTGACATTGAATATGTGCTGGCACTATCAGGCTGCAGACTCAGATCCTGTATGTATGTGATCTTTAATGTCCCTCCATATACTAATGCCCCTGGTGTCTGTACATGTATATAATGCCCTCTGTTGTCTGTTGTATTAGGTAATAAATACCCTGTACTGT
>TU1739843
ggaTATGACAGTTTTTGAAgacccgttggtaggatattcgtgattgtacttcgtctaatttattgtccaatgattgcacgttggtgaGTAGTATTAACGGTGACGggagctttcccactcgccttatccgggtcctgaccaggcatccggttctttgtcctctgtaccagcgtcgcttcctcttgcaaataacgggggTGTTAGGAGAATGTCTTGTGCGCCCTCCTTGTAGAAAAAATATTTGTCTAACcagaggtgagtgatcgctgtcctgatatccagaagctcttcgTGTAATcagagGATGTCTTGACACTTCCATCCCAGCTGTGATGTCTTTAAAACAGTGGCAATTCTCTCTTCATTATCATAGAGCTGGATGCAAAGATGACAGAGGTCCTGGACTATGATTATAAATCAGACTATGACTATAAATCAGCCAATGACTCCTATTACTTCAACATCACCTCCTTTGACCTGAACTTTAACACATTATCCTGTGCAGCTCAGCCCCTTTCTCCCGGTGCCGTCATATTCCTGTGTGTCCTTCACGTCGCCATCTTCCTATTGGCTGTTCCTGGTAACCTACTTGTGGGGCTCGTGATTGGCTTCAGTCAACAGTCCCTGACCCCATCCGACGTCTACCTGTTTCACCTGACTGTAGCTGACGGGCTGCTGGCTCTGACCCTGCC

Function

NR:

description
IL-8 receptor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951026.1 False 1865 mRNA 0.52 3 14898154 14901354
NM_001124279.1 False 1681 mRNA 0.51 3 14898448 14901353
TU1739843 True 692 TUCP 0.48 3 14898256 14900172

Neighbor

gene id symbol gene type direction distance location
LOC118936566 il8r coding upstream 17287 14877692 ~ 14880867 (+)
LOC118941101 il8r coding upstream 36310 14858722 ~ 14861844 (+)
LOC110495453 il8r coding upstream 55269 14835394 ~ 14842885 (+)
zgc:92380 LOC106575639 coding upstream 98843 14792937 ~ 14799311 (+)
LOC110496915 LOC106575634 coding upstream 117327 14779090 ~ 14780827 (+)
LOC110495438 tns1 coding downstream 6600 14907954 ~ 15133334 (+)
LOC110495435 LOC100194500 coding downstream 275047 15176401 ~ 15186345 (+)
LOC110495440 LOC106575601 coding downstream 306001 15207355 ~ 15251952 (+)
LOC110495444 LOC106575602 coding downstream 354895 15256249 ~ 15266522 (+)
LOC110496998 LOC106592612 coding downstream 375219 15276573 ~ 15332387 (+)
G1519750 NA non-coding upstream 1009 14893452 ~ 14897145 (+)
G1519738 NA non-coding upstream 65796 14832159 ~ 14832358 (+)
G1519654 NA non-coding upstream 222449 14672239 ~ 14675705 (+)
LOC110495481 LOC106574739 non-coding upstream 341031 14556326 ~ 14558589 (+)
G1519579 NA non-coding upstream 366317 14530073 ~ 14531837 (+)
G1519759 NA non-coding downstream 8137 14909491 ~ 14909694 (+)
G1519751 NA non-coding downstream 10242 14911596 ~ 14921517 (+)
G1519752 NA non-coding downstream 17351 14918705 ~ 14919404 (+)
G1519766 NA non-coding downstream 29473 14930827 ~ 14931038 (+)
G1519770 NA non-coding downstream 40541 14941895 ~ 14942120 (+)
G1519733 NA other upstream 83268 14813982 ~ 14814886 (+)
G1519538 NA other upstream 399017 14498786 ~ 14499137 (+)
G1519096 NA other upstream 462034 14434762 ~ 14436120 (+)
G1517545 NA other upstream 1710074 13187101 ~ 13188080 (+)
G1520649 NA other downstream 855139 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 894998 15796262 ~ 15801788 (+)
G1520742 NA other downstream 1017803 15919157 ~ 15922899 (+)
G1520748 NA other downstream 1036876 15938230 ~ 15938818 (+)

Expression


Co-expression Network