LOC110495435 (LOC100194500)


Basic Information

Item Value
gene id LOC110495435
gene name LOC100194500
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15176401 ~ 15186345 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021570672.2
TCCCCCATCAACGTCGTTTGACATATAGCCATCGTTACAGGATTCGCCTCTGGCAGTTTTTAAAAAGGCAAGCTCAAAGCCACATATTATACTGTATGTGCAGAAAACGTGCGGGGAGGACAGCCTACAGAGATTGGTTCTTCTACAAGACAATCCttgctttttttcttcttcatttggAGACAATTGATGTGCATGCGTAAAACGACATTTGAAAGCCCAAAAGGAGAAGACTCGGGTTATTACTCGGTGGACAATCTAAACTCGAATATAATTGGACATTTGACACAATAAAGACAACGCAGACACTTCGCCCGGGTGAAGAGTGGAACCTTAGCATCTGACACAGTGATTCAGGGACTTTTACGCACTCAGGCAGTGGCCACCTGTGGATGGTGACTCTTTCAAGGACTTTTGCCCCAAAACCCCAATGATCGAAAGCATTGCAAGCGTTCCATGCAGTACACATAGTAGTTGATTATAGTTGTTTTATGTTTGTAATCATTTTAATTTGAAACAATATGCTGGTTAGTTTTTCACTCCTGGCAACGCTTCTCCTAAGCGAGTCGGGTTGTTTGGGCTCGTTCGTACCGTGCGAACCGTGTGACCAGAAGGTAATGTCGATGTGTCCGCCAGTGCCGGTGGGATGCCAGCTGGTGAAGGAGCCTGGCTGTGGTTGCTGCCTGACTTGCGCGCTCCCGGAGGGACAGTCTTGCGGGGTGTACACGGGGACTTGCACGCACGGGCTCCGATGCCTGCCGAAGAGCGGGGAGGAGAAACCGCTGCACGCGCTCCTCCACGGGAGAGGAGTGTGCGCCAACGAGAAGATATACAAGCCGCTGCATCCAGGCAGGGACGAAGCTATGTTAGCAGAGGTTCCAGAGTCCCTGCTGCCCCAGGCCAAGGTGCCTCTTTACGGGGGCAGAGACCACATCAGCAGCCGCAAGGCTCAGGCCATGAGACAGGCTAAAGACCGCAAGAGACAGCAGGCCAAGCTCCACTCTGTCAGCAGCCTTGACTACTCAACCCTCGCCCTGGACAAACTGCAGCCTGAGTTTGGACCCTGCAGGAGAAAGCTGGACGGGATCATTCAGAGGATGAAAAACACATCTAGAGTCCTAGCTCTGTCCCTATACCTTCCCAACTGTGACAAGAAGGGATTCTTCAAGCACAAGCAGTGTAAACCATCACGTGGGCGGAAGCGGGGGATCTGTTGGTGTGTGGACCGTTTTGGTGTGCAGCTCCCTGGCACGGACTACAGTGGAGTGGACATCCAGTGCAAAGACCCGGAGAGCAACAGCAACAAAAACGAATGAGAGATGGCCAATTTGGTCACCTGACATGAGCCAAGGCCCGCCTCCCTTTACCCCTACTCCTGCAAATCACATGTACATGCAAAATATGCAAAAGCCAATCAAATCAGGAAAGCAGAGcacagatacagtacatacacatggTTTTAAACTACACATCTACCTATACTGAGATGACCTATAACCTCCCTTTGAAGCACATATAACAATGTTCTCTGATTTAAATTATATTAGATTCTGTTTAAACAAAATTTTAAGGCTAAAGAGTAAAGCTAATCTTTTTCACCTATGTTGTTATCGTGATGTTGACAGGAACTCTTTACTGGGGAGCACAGTAATCTGGGGTCGTATTTAAACGTAACTCTGTTCCCTTGGTCCAAATGTTTGTCCCTTCAGAGCACTTCCCTACAAGAGAACCTCAGCGACTGAAAGTACTTTATTGTCTGAGTGTGGGTCTATGTCCTTATATGTCTTTCTGAGTGCGATGAGATGAGCTTTTTTCAGTCCTGCCTTTCTTCCACTTTGTCTCCCAGATTGTTCTGAGTTGAGGGTCTTAAGAACTAGGAACTGCTCGTATACAGTAGGTTGTTACAGAGTAGTTACAGTAGCTATCTTAATAAACCCATCAACTGCTACTTCTGATGGATGTCTCAATATAGTTTCATGGGGTGACTGTATGAaatgactatgtgtgtgtgtgtgtgcctcctaTACTTTCTCCTTTAGTAGTCTGtatgatataaaaaaaaaagatcacCTCAAAAACACATCATGACAGTCATTTGCTTGTTTTGTCGTTTATAAACGACAGCCAAGAAAGTACAGGTGCTTTGAAAAGTCCAACACAGGCTCAAATCGCATGCAAATGCTGCACAGCGTTTCTATTGACTTCTCGTAGCCTCCTGTCTGACCACAACACAGTCTAGGACTCTACTATATGACCCCTGGAAAGGTGTGGCTCTTTGGGTTTCTATGGAAATCTCagtgccttctctctctctcatgacttTGAATCCAGATTTACATCCAGATTATCAGGCCTTGTCGTTGAACGAGGACATTTTAGCAGTATGTGGATGTGGAGATTGGTTGCCCGAGACCCATGAGTTGACGAGTGTGAAGATATAAGTCTCCACGATATAAGGCCGTGATGATACTTCTTGATCCTACGTCCCGTGTGTGAACATGATGTTAAATCAGACGTCAACTGATTTTATTGAAGCTCAAAACATTTGCCAGATATTTTGTTGACATTCCTTGAAATAGACATCCCTTTTTTCAGGGTATGGTAACATGCCGATAGCTTTGACAGGGGCTGTGTGTACAGCCTATGCCTGCCACTAGAATGCATAGGAGACTTGGAAAGCTTTCTCAACTCAGTCTTAAGCTTGCTTGTATGAAAGACCATGAAATCTCAAACATTCCATATTCGtgataaaaaaaacatgcagCAAACAAATAGGTAACAGTTTACTCAAAGCCAAACGGTACAATGCTTCTTTGCTGCAATTTTTTAACAGGCTGAAAATAGCTGTTTAGTCAGGGTCCATCAGAGACGATGGTAAGACATTATAACAGGGTCATACATGCTTATGACAATTCTTACAACGCAATACACCTGTTGGCTTTAAGTGAAGTGTTACTAACAAATCCATGTGAATATTACAAATATGTCATATTTATTCACTGTGTAATTGATATACTTTAACCTTGTCTTTTTTGTAACGACAAAGCATTTATTTAAATAAAGTTATGTATTGATGTATGGGAA

Function

NR:

description
insulin-like growth factor-binding protein 5

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021570672.2 True 3084 mRNA 0.45 4 15176401 15186345

Neighbor

gene id symbol gene type direction distance location
LOC110495438 tns1 coding upstream 43067 14907954 ~ 15133334 (+)
il8r il8r coding upstream 275047 14898154 ~ 14901354 (+)
LOC118936566 il8r coding upstream 295534 14877692 ~ 14880867 (+)
LOC118941101 il8r coding upstream 314557 14858722 ~ 14861844 (+)
LOC110495453 il8r coding upstream 333516 14835394 ~ 14842885 (+)
LOC110495440 LOC106575601 coding downstream 21010 15207355 ~ 15251952 (+)
LOC110495444 LOC106575602 coding downstream 69904 15256249 ~ 15266522 (+)
LOC110496998 LOC106592612 coding downstream 90228 15276573 ~ 15332387 (+)
LOC110495449 LOC106574744 coding downstream 147040 15333385 ~ 15344802 (+)
LOC110495439 LOC106574706 coding downstream 232716 15419061 ~ 15490199 (+)
G1519892 NA non-coding upstream 1549 15174631 ~ 15174852 (+)
G1519889 NA non-coding upstream 4213 15171956 ~ 15172188 (+)
G1519888 NA non-coding upstream 4815 15171362 ~ 15171586 (+)
G1519878 NA non-coding upstream 21854 15154310 ~ 15154547 (+)
G1519863 NA non-coding upstream 28220 15147790 ~ 15148181 (+)
G1519873 LOC106575565 non-coding downstream 486 15186831 ~ 15191130 (+)
G1519904 NA non-coding downstream 37619 15223964 ~ 15224303 (+)
G1519915 NA non-coding downstream 62690 15249035 ~ 15249599 (+)
G1519916 NA non-coding downstream 63312 15249657 ~ 15249945 (+)
G1519917 NA non-coding downstream 63740 15250085 ~ 15250659 (+)
G1519733 NA other upstream 361515 14813982 ~ 14814886 (+)
LOC110495481 LOC106574739 other upstream 619055 14556326 ~ 14558589 (+)
G1519538 NA other upstream 677264 14498786 ~ 14499137 (+)
G1519096 NA other upstream 740281 14434762 ~ 14436120 (+)
G1520649 NA other downstream 570148 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 610007 15796262 ~ 15801788 (+)
G1520742 NA other downstream 732812 15919157 ~ 15922899 (+)
G1520748 NA other downstream 751885 15938230 ~ 15938818 (+)

Expression


Co-expression Network